Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC23.6■■□□□ 1.37
PCDH7O60245 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCDH7O60245 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
PCDH7O60245 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC23.6■■□□□ 1.37
PCDH7O60245 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PCDH7O60245 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
PCDH7O60245 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC23.59■■□□□ 1.37
PCDH7O60245 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
PCDH7O60245 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC23.58■■□□□ 1.37
PCDH7O60245 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
PCDH7O60245 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
PCDH7O60245 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.37
PCDH7O60245 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC23.58■■□□□ 1.37
PCDH7O60245 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC23.58■■□□□ 1.37
PCDH7O60245 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC23.58■■□□□ 1.37
PCDH7O60245 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
PCDH7O60245 SHF-207ENST00000560540 2062 ntTSL 5 BASIC23.58■■□□□ 1.36
PCDH7O60245 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
PCDH7O60245 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
PCDH7O60245 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC23.57■■□□□ 1.36
PCDH7O60245 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
PCDH7O60245 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PCDH7O60245 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
PCDH7O60245 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC23.57■■□□□ 1.36
PCDH7O60245 CR559946.2-201ENST00000623684 991 ntBASIC23.57■■□□□ 1.36
PCDH7O60245 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC23.57■■□□□ 1.36
PCDH7O60245 MIR219A2-201ENST00000608502 1504 ntBASIC23.57■■□□□ 1.36
PCDH7O60245 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PCDH7O60245 AC142472.1-201ENST00000612013 1741 ntBASIC23.56■■□□□ 1.36
PCDH7O60245 AC148477.6-201ENST00000623746 465 ntBASIC23.56■■□□□ 1.36
PCDH7O60245 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC23.55■■□□□ 1.36
PCDH7O60245 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC23.55■■□□□ 1.36
PCDH7O60245 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
PCDH7O60245 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PCDH7O60245 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
PCDH7O60245 HLA-V-202ENST00000446817 847 ntBASIC23.54■■□□□ 1.36
PCDH7O60245 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC23.54■■□□□ 1.36
PCDH7O60245 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC23.53■■□□□ 1.36
PCDH7O60245 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
PCDH7O60245 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PCDH7O60245 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC23.53■■□□□ 1.36
PCDH7O60245 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
PCDH7O60245 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC23.52■■□□□ 1.36
PCDH7O60245 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
PCDH7O60245 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
PCDH7O60245 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
PCDH7O60245 CHST11-203ENST00000547956 936 ntTSL 2 BASIC23.52■■□□□ 1.36
PCDH7O60245 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
PCDH7O60245 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
PCDH7O60245 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC23.52■■□□□ 1.36
PCDH7O60245 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PCDH7O60245 AC091060.1-201ENST00000623524 1766 ntBASIC23.51■■□□□ 1.35
PCDH7O60245 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
PCDH7O60245 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PCDH7O60245 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PCDH7O60245 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
PCDH7O60245 GDI1-215ENST00000630693 786 ntTSL 4 BASIC23.5■■□□□ 1.35
PCDH7O60245 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
PCDH7O60245 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
PCDH7O60245 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
PCDH7O60245 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
PCDH7O60245 MACF1-219ENST00000484793 834 ntTSL 2 BASIC23.49■■□□□ 1.35
PCDH7O60245 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC23.49■■□□□ 1.35
PCDH7O60245 MIR3648-2-201ENST00000581792 180 ntBASIC23.49■■□□□ 1.35
PCDH7O60245 MIR3648-1-201ENST00000615959 180 ntBASIC23.49■■□□□ 1.35
PCDH7O60245 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
PCDH7O60245 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
PCDH7O60245 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PCDH7O60245 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PCDH7O60245 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC23.48■■□□□ 1.35
PCDH7O60245 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
PCDH7O60245 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
PCDH7O60245 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
PCDH7O60245 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC23.48■■□□□ 1.35
PCDH7O60245 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC23.48■■□□□ 1.35
PCDH7O60245 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
PCDH7O60245 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
PCDH7O60245 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
PCDH7O60245 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
PCDH7O60245 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC23.47■■□□□ 1.35
PCDH7O60245 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC23.46■■□□□ 1.35
PCDH7O60245 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC23.46■■□□□ 1.35
PCDH7O60245 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC23.46■■□□□ 1.35
PCDH7O60245 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC23.45■■□□□ 1.35
PCDH7O60245 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
PCDH7O60245 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC23.45■■□□□ 1.34
PCDH7O60245 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
PCDH7O60245 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
PCDH7O60245 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
PCDH7O60245 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC23.45■■□□□ 1.34
PCDH7O60245 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC23.44■■□□□ 1.34
PCDH7O60245 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC23.44■■□□□ 1.34
PCDH7O60245 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
PCDH7O60245 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC23.43■■□□□ 1.34
PCDH7O60245 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC23.43■■□□□ 1.34
PCDH7O60245 AC016575.1-201ENST00000607026 382 ntBASIC23.43■■□□□ 1.34
PCDH7O60245 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
PCDH7O60245 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
PCDH7O60245 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
PCDH7O60245 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms