Protein–RNA interactions for Protein: O00305

CACNB4, Voltage-dependent L-type calcium channel subunit beta-4, humanhuman

Predicted RBP Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4O00305 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC24.54■■□□□ 1.52
CACNB4O00305 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
CACNB4O00305 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CACNB4O00305 AC007029.1-201ENST00000604183 313 ntBASIC24.53■■□□□ 1.52
CACNB4O00305 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC24.53■■□□□ 1.52
CACNB4O00305 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC24.53■■□□□ 1.52
CACNB4O00305 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC24.52■■□□□ 1.52
CACNB4O00305 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC24.52■■□□□ 1.52
CACNB4O00305 U85056.1-201ENST00000616429 682 ntBASIC24.52■■□□□ 1.52
CACNB4O00305 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
CACNB4O00305 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
CACNB4O00305 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC24.51■■□□□ 1.51
CACNB4O00305 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
CACNB4O00305 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CACNB4O00305 WHAMMP3-201ENST00000611636 1609 ntBASIC24.5■■□□□ 1.51
CACNB4O00305 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CACNB4O00305 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC24.5■■□□□ 1.51
CACNB4O00305 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CACNB4O00305 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
CACNB4O00305 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
CACNB4O00305 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC24.48■■□□□ 1.51
CACNB4O00305 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC24.47■■□□□ 1.51
CACNB4O00305 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC24.47■■□□□ 1.51
CACNB4O00305 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
CACNB4O00305 AC025884.2-201ENST00000553429 711 ntBASIC24.47■■□□□ 1.51
CACNB4O00305 AC012354.3-201ENST00000623734 483 ntBASIC24.47■■□□□ 1.51
CACNB4O00305 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
CACNB4O00305 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
CACNB4O00305 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC24.46■■□□□ 1.51
CACNB4O00305 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
CACNB4O00305 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
CACNB4O00305 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
CACNB4O00305 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC24.45■■□□□ 1.5
CACNB4O00305 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
CACNB4O00305 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.5
CACNB4O00305 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
CACNB4O00305 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
CACNB4O00305 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CACNB4O00305 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC24.44■■□□□ 1.5
CACNB4O00305 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC24.43■■□□□ 1.5
CACNB4O00305 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC24.43■■□□□ 1.5
CACNB4O00305 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC24.43■■□□□ 1.5
CACNB4O00305 LINC01003-201ENST00000564834 1764 ntBASIC24.43■■□□□ 1.5
CACNB4O00305 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CACNB4O00305 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC24.43■■□□□ 1.5
CACNB4O00305 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC24.42■■□□□ 1.5
CACNB4O00305 GFER-205ENST00000569451 517 ntTSL 5 BASIC24.42■■□□□ 1.5
CACNB4O00305 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC24.42■■□□□ 1.5
CACNB4O00305 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
CACNB4O00305 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
CACNB4O00305 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC24.41■■□□□ 1.5
CACNB4O00305 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC24.41■■□□□ 1.5
CACNB4O00305 RP9P-202ENST00000450133 1212 ntBASIC24.41■■□□□ 1.5
CACNB4O00305 PFN2-211ENST00000489155 636 ntTSL 4 BASIC24.41■■□□□ 1.5
CACNB4O00305 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
CACNB4O00305 MIR3960-201ENST00000583311 91 ntBASIC24.41■■□□□ 1.5
CACNB4O00305 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
CACNB4O00305 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC24.4■■□□□ 1.5
CACNB4O00305 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
CACNB4O00305 KRT18P60-201ENST00000312876 1297 ntBASIC24.4■■□□□ 1.5
CACNB4O00305 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
CACNB4O00305 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
CACNB4O00305 AC133552.2-201ENST00000619106 1032 ntBASIC24.4■■□□□ 1.5
CACNB4O00305 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CACNB4O00305 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
CACNB4O00305 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
CACNB4O00305 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
CACNB4O00305 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
CACNB4O00305 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC24.39■■□□□ 1.5
CACNB4O00305 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.49
CACNB4O00305 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
CACNB4O00305 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.49
CACNB4O00305 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.49
CACNB4O00305 AL359504.2-201ENST00000605506 1601 ntBASIC24.39■■□□□ 1.49
CACNB4O00305 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
CACNB4O00305 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC24.38■■□□□ 1.49
CACNB4O00305 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
CACNB4O00305 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
CACNB4O00305 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
CACNB4O00305 AC009831.1-201ENST00000580420 1582 ntBASIC24.37■■□□□ 1.49
CACNB4O00305 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC24.37■■□□□ 1.49
CACNB4O00305 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
CACNB4O00305 HES4-204ENST00000484667 667 ntTSL 3 BASIC24.37■■□□□ 1.49
CACNB4O00305 AC093536.1-201ENST00000569153 554 ntBASIC24.37■■□□□ 1.49
CACNB4O00305 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC24.37■■□□□ 1.49
CACNB4O00305 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC24.37■■□□□ 1.49
CACNB4O00305 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
CACNB4O00305 AC026202.3-201ENST00000600805 1127 ntBASIC24.36■■□□□ 1.49
CACNB4O00305 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC24.36■■□□□ 1.49
CACNB4O00305 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
CACNB4O00305 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CACNB4O00305 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
CACNB4O00305 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
CACNB4O00305 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC24.35■■□□□ 1.49
CACNB4O00305 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CACNB4O00305 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CACNB4O00305 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CACNB4O00305 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CACNB4O00305 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CACNB4O00305 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms