Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 SRSF7-203ENST00000415527 1135 ntTSL 513.99□□□□□ -0.173e-9■□□□□ 10.4
SRSF1Q07955 ABCF1-204ENST00000468958 606 ntTSL 311.88□□□□□ -0.513e-7■□□□□ 10.4
SRSF1Q07955 SH3GLB2-206ENST00000417224 1468 ntTSL 5 BASIC11.63□□□□□ -0.553e-9■□□□□ 10.4
SRSF1Q07955 SH3GLB2-207ENST00000425236 538 ntTSL 311.03□□□□□ -0.643e-9■□□□□ 10.4
SRSF1Q07955 USP34-221ENST00000494867 795 ntTSL 310.34□□□□□ -0.753e-9■□□□□ 10.4
SRSF1Q07955 SRSF7-206ENST00000431066 1847 ntTSL 59.26□□□□□ -0.933e-9■□□□□ 10.4
SRSF1Q07955 SRSF7-208ENST00000443213 1903 ntTSL 59.25□□□□□ -0.933e-9■□□□□ 10.4
SRSF1Q07955 CDK5RAP3-211ENST00000578996 566 ntTSL 28.86□□□□□ -0.993e-9■□□□□ 10.4
SRSF1Q07955 SRSF7-205ENST00000425941 1944 ntTSL 58.65□□□□□ -1.023e-9■□□□□ 10.4
SRSF1Q07955 SRSF7-209ENST00000446327 2453 ntTSL 2 BASIC8.6□□□□□ -1.033e-9■□□□□ 10.4
SRSF1Q07955 SRSF7-201ENST00000313117 2489 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.043e-9■□□□□ 10.4
SRSF1Q07955 CDK5RAP3-229ENST00000583697 852 ntTSL 38.45□□□□□ -1.064e-10■□□□□ 10.4
SRSF1Q07955 CDK5RAP3-209ENST00000578663 949 ntTSL 38.22□□□□□ -1.093e-9■□□□□ 10.4
SRSF1Q07955 CDK5RAP3-225ENST00000582482 2455 ntTSL 28.15□□□□□ -1.13e-9■□□□□ 10.4
SRSF1Q07955 SRSF7-202ENST00000409276 1050 ntTSL 5 BASIC7.27□□□□□ -1.253e-9■□□□□ 10.4
SRSF1Q07955 SRSF7-204ENST00000425778 2857 ntTSL 27.06□□□□□ -1.283e-9■□□□□ 10.4
SRSF1Q07955 USP34-215ENST00000484179 927 ntTSL 34.56□□□□□ -1.683e-9■□□□□ 10.4
SRSF1Q07955 SRSF7-207ENST00000432873 603 ntTSL 33.8□□□□□ -1.83e-10■□□□□ 10.4
SRSF1Q07955 SRSF7-212ENST00000487773 637 ntTSL 53.5□□□□□ -1.853e-10■□□□□ 10.4
SRSF1Q07955 SRSF7-210ENST00000452806 747 ntTSL 23.38□□□□□ -1.873e-10■□□□□ 10.4
SRSF1Q07955 EP400-202ENST00000332482 2588 ntTSL 1 (best)14.88□□□□□ -0.032e-7■□□□□ 10.4
SRSF1Q07955 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC15.3■□□□□ 0.047e-8■□□□□ 10.4
SRSF1Q07955 CBX5-206ENST00000618078 2627 ntTSL 211.97□□□□□ -0.495e-8■□□□□ 10.4
SRSF1Q07955 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.635e-8■□□□□ 10.4
SRSF1Q07955 NKTR-204ENST00000445842 560 ntTSL 520.92■□□□□ 0.941e-6■□□□□ 10.4
SRSF1Q07955 NKTR-203ENST00000442970 646 ntTSL 2 BASIC15.51■□□□□ 0.071e-6■□□□□ 10.4
SRSF1Q07955 NKTR-215ENST00000487466 2335 ntTSL 212.62□□□□□ -0.391e-6■□□□□ 10.4
SRSF1Q07955 NKTR-201ENST00000232978 7343 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91e-6■□□□□ 10.4
SRSF1Q07955 NKTR-211ENST00000468735 7964 ntTSL 25.74□□□□□ -1.491e-6■□□□□ 10.4
SRSF1Q07955 NKTR-202ENST00000429888 7325 ntTSL 53.2□□□□□ -1.91e-6■□□□□ 10.4
SRSF1Q07955 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.18□□□□□ -1.91e-6■□□□□ 10.4
SRSF1Q07955 KIAA0907-202ENST00000368320 4499 ntTSL 1 (best) BASIC8.58□□□□□ -1.042e-8■□□□□ 10.4
SRSF1Q07955 KIAA0907-203ENST00000368321 2947 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.062e-8■□□□□ 10.4
SRSF1Q07955 KIAA0907-207ENST00000478002 1065 ntTSL 55.46□□□□□ -1.542e-8■□□□□ 10.4
SRSF1Q07955 GGCX-206ENST00000465637 563 ntTSL 411.77□□□□□ -0.534e-8■□□□□ 10.4
SRSF1Q07955 GGCX-210ENST00000496962 684 ntTSL 211.45□□□□□ -0.584e-8■□□□□ 10.4
SRSF1Q07955 GGCX-204ENST00000428479 533 ntTSL 411.17□□□□□ -0.624e-8■□□□□ 10.4
SRSF1Q07955 GGCX-202ENST00000421496 540 ntTSL 410.73□□□□□ -0.694e-8■□□□□ 10.4
SRSF1Q07955 GGCX-203ENST00000423570 1339 ntTSL 1 (best)9.63□□□□□ -0.874e-8■□□□□ 10.4
SRSF1Q07955 GGCX-208ENST00000481541 600 ntTSL 29.09□□□□□ -0.954e-8■□□□□ 10.4
SRSF1Q07955 GGCX-205ENST00000430215 2314 ntTSL 2 BASIC8.69□□□□□ -1.024e-8■□□□□ 10.4
SRSF1Q07955 GGCX-201ENST00000233838 7569 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.344e-8■□□□□ 10.4
SRSF1Q07955 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.282e-7■□□□□ 10.4
SRSF1Q07955 PPP1R12C-209ENST00000592993 2269 ntTSL 1 (best)16.2■□□□□ 0.182e-7■□□□□ 10.4
SRSF1Q07955 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC15.38■□□□□ 0.052e-7■□□□□ 10.4
SRSF1Q07955 RNF7-203ENST00000477012 1036 ntTSL 1 (best)15.96■□□□□ 0.156e-8■□□□□ 10.4
SRSF1Q07955 RNF7-204ENST00000477393 862 ntTSL 215.21■□□□□ 0.036e-8■□□□□ 10.4
SRSF1Q07955 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.176e-8■□□□□ 10.4
SRSF1Q07955 RNF7-207ENST00000498828 652 ntTSL 213.32□□□□□ -0.286e-8■□□□□ 10.4
SRSF1Q07955 RNF7-205ENST00000480908 782 ntTSL 4 BASIC12.42□□□□□ -0.426e-8■□□□□ 10.4
SRSF1Q07955 RNF7-202ENST00000393000 805 ntTSL 2 BASIC12.13□□□□□ -0.476e-8■□□□□ 10.4
SRSF1Q07955 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.086e-7■□□□□ 10.4
SRSF1Q07955 PANK2-202ENST00000336066 1843 ntTSL 1 (best)20.79■□□□□ 0.926e-7■□□□□ 10.4
SRSF1Q07955 PANK2-205ENST00000495692 967 ntTSL 318.31■□□□□ 0.526e-7■□□□□ 10.4
SRSF1Q07955 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.356e-7■□□□□ 10.4
SRSF1Q07955 PANK2-206ENST00000497424 4815 ntTSL 2 BASIC9.99□□□□□ -0.816e-7■□□□□ 10.4
SRSF1Q07955 DDX39A-212ENST00000590260 988 ntTSL 217.07■□□□□ 0.324e-8■□□□□ 10.3
SRSF1Q07955 DDX39A-210ENST00000589675 829 ntTSL 310.75□□□□□ -0.694e-8■□□□□ 10.3
SRSF1Q07955 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.087e-9■□□□□ 10.3
SRSF1Q07955 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.117e-9■□□□□ 10.3
SRSF1Q07955 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.352e-7■□□□□ 10.3
SRSF1Q07955 FAM182B-203ENST00000424021 605 ntTSL 513.12□□□□□ -0.316e-8■□□□□ 10.3
SRSF1Q07955 TRA2B-214ENST00000487615 4485 ntTSL 1 (best)9.29□□□□□ -0.926e-8■□□□□ 10.3
SRSF1Q07955 CTTN-214ENST00000532334 481 ntTSL 26.29□□□□□ -1.46e-8■□□□□ 10.3
SRSF1Q07955 TRA2B-210ENST00000471134 724 ntTSL 55.8□□□□□ -1.486e-8■□□□□ 10.3
SRSF1Q07955 FANCI-212ENST00000566895 4663 ntTSL 24.76□□□□□ -1.656e-8■□□□□ 10.3
SRSF1Q07955 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.39□□□□□ -1.716e-8■□□□□ 10.3
SRSF1Q07955 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.846e-8■□□□□ 10.3
SRSF1Q07955 FANCI-203ENST00000447611 3690 ntTSL 23.14□□□□□ -1.916e-8■□□□□ 10.3
SRSF1Q07955 FANCI-204ENST00000561894 3268 ntTSL 23.11□□□□□ -1.916e-8■□□□□ 10.3
SRSF1Q07955 FANCI-210ENST00000565522 233 ntTSL 52.97□□□□□ -1.936e-8■□□□□ 10.3
SRSF1Q07955 NDUFV1-227ENST00000534139 626 ntTSL 319.87■□□□□ 0.772e-6■□□□□ 10.3
SRSF1Q07955 NDUFV1-213ENST00000528377 898 ntTSL 218.01■□□□□ 0.472e-6■□□□□ 10.3
SRSF1Q07955 NDUFV1-225ENST00000533075 582 ntTSL 317.68■□□□□ 0.422e-6■□□□□ 10.3
SRSF1Q07955 NDUFV1-221ENST00000532244 786 ntTSL 216.68■□□□□ 0.262e-6■□□□□ 10.3
SRSF1Q07955 NDUFV1-205ENST00000525086 575 ntTSL 416.52■□□□□ 0.242e-6■□□□□ 10.3
SRSF1Q07955 NDUFV1-219ENST00000530638 582 ntTSL 515.35■□□□□ 0.052e-6■□□□□ 10.3
SRSF1Q07955 NDUFV1-215ENST00000529867 582 ntTSL 313.79□□□□□ -0.22e-6■□□□□ 10.3
SRSF1Q07955 NDUFV1-224ENST00000532343 620 ntTSL 313.79□□□□□ -0.22e-6■□□□□ 10.3
SRSF1Q07955 NDUFV1-203ENST00000524838 1200 ntTSL 1 (best)13.48□□□□□ -0.252e-6■□□□□ 10.3
SRSF1Q07955 B4GALNT4-203ENST00000526584 421 ntTSL 316.83■□□□□ 0.283e-8■□□□□ 10.3
SRSF1Q07955 HNRNPH1-239ENST00000521173 831 ntTSL 59.71□□□□□ -0.862e-17■□□□□ 10.3
SRSF1Q07955 SETD5-203ENST00000402198 6827 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.992e-6■□□□□ 10.3
SRSF1Q07955 SETD5-201ENST00000302463 4786 ntTSL 1 (best) BASIC7.44□□□□□ -1.222e-6■□□□□ 10.3
SRSF1Q07955 SETD5-205ENST00000407969 6463 ntTSL 5 BASIC6.63□□□□□ -1.352e-6■□□□□ 10.3
SRSF1Q07955 SETD5-204ENST00000406341 6582 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.42e-6■□□□□ 10.3
SRSF1Q07955 MAP4K3-206ENST00000437968 500 ntTSL 525.96■■□□□ 1.755e-7■□□□□ 10.3
SRSF1Q07955 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC22.76■■□□□ 1.235e-7■□□□□ 10.3
SRSF1Q07955 MAP4K3-204ENST00000429397 689 ntTSL 322.55■■□□□ 1.25e-7■□□□□ 10.3
SRSF1Q07955 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC13.26□□□□□ -0.295e-7■□□□□ 10.3
SRSF1Q07955 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.35e-7■□□□□ 10.3
SRSF1Q07955 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.9■□□□□ 0.622e-7■□□□□ 10.3
SRSF1Q07955 SFXN1-209ENST00000508290 592 ntTSL 418.45■□□□□ 0.542e-7■□□□□ 10.3
SRSF1Q07955 SFXN1-207ENST00000507395 527 ntTSL 216.94■□□□□ 0.32e-7■□□□□ 10.3
SRSF1Q07955 SFXN1-212ENST00000515791 569 ntTSL 416.94■□□□□ 0.32e-7■□□□□ 10.3
SRSF1Q07955 SFXN1-208ENST00000507823 2611 ntTSL 213.77□□□□□ -0.212e-7■□□□□ 10.3
SRSF1Q07955 SFXN1-210ENST00000513725 597 ntTSL 213.43□□□□□ -0.262e-7■□□□□ 10.3
SRSF1Q07955 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.312e-7■□□□□ 10.3
SRSF1Q07955 SFXN1-205ENST00000506963 796 ntTSL 38.76□□□□□ -1.012e-7■□□□□ 10.3
SRSF1Q07955 SFXN1-206ENST00000507017 572 ntTSL 57.1□□□□□ -1.272e-7■□□□□ 10.3
Retrieved 100 of 14,836 protein–RNA pairs in 279.7 ms