RNA–Protein interactions for RNA: ENST00000336066.7

PANK2-202, Transcript of pantothenate kinase 2, humanhuman

TSL 1 (best)

Gene PANK2, Length 1,843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PANK2-202ENST00000336066 NISCHQ9Y2I1 1504 aa56.96■■■■■ 6.71
PANK2-202ENST00000336066 CCDC180Q9P1Z9 1646 aa49.83■■■■■ 5.57
PANK2-202ENST00000336066 ZCCHC6Q5VYS8 1495 aaKnown RBP47.78■■■■■ 5.24
PANK2-202ENST00000336066 ABCC9O60706 1549 aa47.34■■■■■ 5.17
PANK2-202ENST00000336066 DCAF8L2P0C7V8 631 aa47.15■■■■■ 5.14
PANK2-202ENST00000336066 DCAF1Q9Y4B6 1507 aa47.13■■■■■ 5.14
PANK2-202ENST00000336066 MYO15BQ96JP2 1530 aa46.7■■■■■ 5.07
PANK2-202ENST00000336066 NACADO15069 1562 aa46.49■■■■■ 5.03
PANK2-202ENST00000336066 SHROOM4Q9ULL8 1493 aa46.21■■■■■ 4.99
PANK2-202ENST00000336066 RB1CC1Q8TDY2 1594 aa46.16■■■■■ 4.98
PANK2-202ENST00000336066 SCRIBQ14160 1630 aa45.74■■■■■ 4.91
PANK2-202ENST00000336066 UNC13AQ9UPW8 1703 aa45.2■■■■■ 4.83
PANK2-202ENST00000336066 BICRAQ9NZM4 1560 aa44.72■■■■■ 4.75
PANK2-202ENST00000336066 PABPN1Q86U42 306 aaKnown RBP eCLIP44.58■■■■■ 4.73
PANK2-202ENST00000336066 SUPT5HO00267 1087 aaKnown RBP44.36■■■■■ 4.69
PANK2-202ENST00000336066 CECR2Q9BXF3 1484 aa44.25■■■■■ 4.67
PANK2-202ENST00000336066 RSF1Q96T23 1441 aaPredicted RBP44.07■■■■■ 4.65
PANK2-202ENST00000336066 BAZ1AQ9NRL2 1556 aaPredicted RBP44.03■■■■■ 4.64
PANK2-202ENST00000336066 MROH2BQ7Z745 1585 aa43.97■■■■■ 4.63
PANK2-202ENST00000336066 SMARCA4P51532 1647 aa43.85■■■■■ 4.61
PANK2-202ENST00000336066 WIZO95785 1651 aa43.61■■■■■ 4.57
PANK2-202ENST00000336066 EIF4G1Q04637 1599 aaKnown RBP43.42■■■■■ 4.54
PANK2-202ENST00000336066 PEG3Q9GZU2 1588 aa43.34■■■■■ 4.53
PANK2-202ENST00000336066 SMARCA2P51531 1590 aa43.2■■■■■ 4.51
PANK2-202ENST00000336066 ATAD2BQ9ULI0 1458 aa43.2■■■■■ 4.51
PANK2-202ENST00000336066 TOP2AP11388 1531 aaKnown RBP43.16■■■■■ 4.5
PANK2-202ENST00000336066 BAZ1BQ9UIG0 1483 aaKnown RBP42.96■■■■■ 4.47
PANK2-202ENST00000336066 NCAPD3P42695 1498 aa42.9■■■■■ 4.46
PANK2-202ENST00000336066 CC2D2AQ9P2K1 1620 aa42.85■■■■■ 4.45
PANK2-202ENST00000336066 HMGXB3Q12766 1538 aa42.81■■■■■ 4.44
PANK2-202ENST00000336066 CCDC88BA6NC98 1476 aa42.71■■■■■ 4.43
PANK2-202ENST00000336066 CHIC1Q5VXU3 224 aa42.31■■■■■ 4.36
PANK2-202ENST00000336066 DNAJC5BQ9UF47 199 aa42.21■■■■■ 4.35
PANK2-202ENST00000336066 CFTRP13569 1480 aa41.86■■■■■ 4.29
PANK2-202ENST00000336066 CADPSQ9ULU8 1353 aa41.78■■■■■ 4.28
PANK2-202ENST00000336066 TRIM41Q8WV44 630 aa41.76■■■■■ 4.28
PANK2-202ENST00000336066 ABCC8Q09428 1581 aa41.69■■■■■ 4.26
PANK2-202ENST00000336066 PRDM2Q13029 1718 aa41.66■■■■■ 4.26
PANK2-202ENST00000336066 WRNQ14191 1432 aaPredicted RBP eCLIP41.51■■■■■ 4.23
PANK2-202ENST00000336066 LAMC3Q9Y6N6 1575 aa41.5■■■■■ 4.23
PANK2-202ENST00000336066 NESP48681 1621 aa41.46■■■■■ 4.23
PANK2-202ENST00000336066 SYNJ1O43426 1573 aa41.31■■■■■ 4.2
PANK2-202ENST00000336066 FANCD2Q9BXW9 1451 aa41.31■■■■■ 4.2
PANK2-202ENST00000336066 TOP2BQ02880 1626 aa41.2■■■■■ 4.19
PANK2-202ENST00000336066 PDS5BQ9NTI5 1447 aa41.2■■■■■ 4.19
PANK2-202ENST00000336066 BIVM-ERCC5R4GMW8 1640 aa41.17■■■■■ 4.18
PANK2-202ENST00000336066 CUX1P39880 1505 aa41.14■■■■■ 4.18
PANK2-202ENST00000336066 CEP164Q9UPV0 1460 aa41.08■■■■■ 4.17
PANK2-202ENST00000336066 KIF21AQ7Z4S6 1674 aa40.99■■■■■ 4.15
PANK2-202ENST00000336066 FAM9AQ8IZU1 332 aaPredicted RBP40.94■■■■■ 4.14
PANK2-202ENST00000336066 DNMBPQ6XZF7 1577 aa40.88■■■■■ 4.14
PANK2-202ENST00000336066 SOGA1O94964 1423 aa40.86■■■■■ 4.13
PANK2-202ENST00000336066 TOPBP1Q92547 1522 aa40.82■■■■■ 4.13
PANK2-202ENST00000336066 EEA1Q15075 1411 aa40.79■■■■■ 4.12
PANK2-202ENST00000336066 URB2Q14146 1524 aaKnown RBP40.78■■■■■ 4.12
PANK2-202ENST00000336066 FGD5Q6ZNL6 1462 aa40.75■■■■■ 4.11
PANK2-202ENST00000336066 RUSC2Q8N2Y8 1516 aa40.71■■■■■ 4.11
PANK2-202ENST00000336066 LOC105371045A0A1W2PR82 267 aa40.66■■■■■ 4.1
PANK2-202ENST00000336066 ERCC6Q03468 1493 aa40.65■■■■■ 4.1
PANK2-202ENST00000336066 MRC2Q9UBG0 1479 aa40.65■■■■■ 4.1
PANK2-202ENST00000336066 POLA1P09884 1462 aaPredicted RBP40.59■■■■■ 4.09
PANK2-202ENST00000336066 CSRNP3Q8WYN3 585 aa40.58■■■■■ 4.09
PANK2-202ENST00000336066 KIF27Q86VH2 1401 aa40.5■■■■■ 4.07
PANK2-202ENST00000336066 WDR62O43379 1518 aa40.45■■■■■ 4.07
PANK2-202ENST00000336066 RAD54L2Q9Y4B4 1467 aa40.44■■■■■ 4.06
PANK2-202ENST00000336066 CUX2O14529 1486 aa40.43■■■■■ 4.06
PANK2-202ENST00000336066 ABCA10Q8WWZ4 1543 aa40.4■■■■■ 4.06
PANK2-202ENST00000336066 THOC2Q8NI27 1593 aaKnown RBP40.38■■■■■ 4.05
PANK2-202ENST00000336066 EHMT2Q96KQ7 1210 aa40.35■■■■■ 4.05
PANK2-202ENST00000336066 WDR97A6NE52 1622 aa40.27■■■■■ 4.04
PANK2-202ENST00000336066 KIF21BO75037 1637 aa40.25■■■■■ 4.03
PANK2-202ENST00000336066 TARBP1Q13395 1621 aaKnown RBP40.23■■■■■ 4.03
PANK2-202ENST00000336066 GOLGA3Q08378 1498 aa40.18■■■■■ 4.02
PANK2-202ENST00000336066 IGF1RP08069 1367 aa40.15■■■■■ 4.02
PANK2-202ENST00000336066 IFT140Q96RY7 1462 aa40.13■■■■■ 4.01
PANK2-202ENST00000336066 PRXQ9BXM0 1461 aa40.13■■■■■ 4.01
PANK2-202ENST00000336066 TDRD9Q8NDG6 1382 aaKnown RBP40.09■■■■■ 4.01
PANK2-202ENST00000336066 ABCA5Q8WWZ7 1642 aa40.08■■■■■ 4.01
PANK2-202ENST00000336066 RAPGEF2Q9Y4G8 1499 aa40.04■■■■■ 4
PANK2-202ENST00000336066 ERICH3Q5RHP9 1530 aa40.04■■■■■ 4
PANK2-202ENST00000336066 UBTFP17480 764 aaKnown RBP40.04■■■■■ 4
PANK2-202ENST00000336066 GAPVD1Q14C86 1478 aa40.03■■■■■ 4
PANK2-202ENST00000336066 TNIKQ9UKE5 1360 aa40.01■■■■■ 4
PANK2-202ENST00000336066 CARMIL1Q5VZK9 1371 aa39.96■■■■□ 3.99
PANK2-202ENST00000336066 CUL7Q14999 1698 aa39.9■■■■□ 3.98
PANK2-202ENST00000336066 AQRO60306 1485 aaKnown RBP eCLIP39.89■■■■□ 3.988e-7■■■■□ 19.8
PANK2-202ENST00000336066 ZNF608Q9ULD9 1512 aaPredicted RBP39.87■■■■□ 3.97
PANK2-202ENST00000336066 PBRM1Q86U86 1689 aa39.82■■■■□ 3.97
PANK2-202ENST00000336066 GRIN2BQ13224 1484 aa39.77■■■■□ 3.96
PANK2-202ENST00000336066 CEP162Q5TB80 1403 aa39.75■■■■□ 3.95
PANK2-202ENST00000336066 EIF4G3O43432 1585 aaKnown RBP39.75■■■■□ 3.95
PANK2-202ENST00000336066 FHAD1B1AJZ9 1412 aa39.6■■■■□ 3.93
PANK2-202ENST00000336066 ADAMTS12P58397 1594 aa39.57■■■■□ 3.93
PANK2-202ENST00000336066 CLIP1P30622 1438 aa39.52■■■■□ 3.92
PANK2-202ENST00000336066 SNAPC4Q5SXM2 1469 aa39.51■■■■□ 3.92
PANK2-202ENST00000336066 MAGI1Q96QZ7 1491 aaPredicted RBP39.47■■■■□ 3.91
PANK2-202ENST00000336066 RANGAP1P46060 587 aaPredicted RBP39.43■■■■□ 3.9
PANK2-202ENST00000336066 CTTNBP2Q8WZ74 1663 aa39.4■■■■□ 3.9
PANK2-202ENST00000336066 SYNJ2O15056 1496 aa39.31■■■■□ 3.88
PANK2-202ENST00000336066 GRIN2AQ12879 1464 aa39.27■■■■□ 3.88
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms