RNA–Protein interactions for RNA: ENST00000471134.1

TRA2B-210, Transcript of transformer 2 beta homolog, humanhuman

TSL 5

Gene TRA2B, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-210ENST00000471134 AEBP2Q6ZN18 517 aaPredicted RBP34.86■■■■□ 3.17
TRA2B-210ENST00000471134 CHIC1Q5VXU3 224 aa33.23■■■□□ 2.91
TRA2B-210ENST00000471134 SENP3Q9H4L4 574 aaPredicted RBP29.57■■■□□ 2.32
TRA2B-210ENST00000471134 PHF23Q9BUL5 403 aaPredicted RBP29.25■■■□□ 2.27
TRA2B-210ENST00000471134 FOXD1Q16676 465 aa27.62■■■□□ 2.01
TRA2B-210ENST00000471134 PLPPR3Q6T4P5 718 aa26.59■■□□□ 1.85
TRA2B-210ENST00000471134 PPP6R1Q9UPN7 881 aa26.03■■□□□ 1.76
TRA2B-210ENST00000471134 ADRA2BP18089 450 aa25.93■■□□□ 1.74
TRA2B-210ENST00000471134 PIAS4Q8N2W9 510 aaPredicted RBP25.82■■□□□ 1.72
TRA2B-210ENST00000471134 MSH5O43196 834 aa25.66■■□□□ 1.7
TRA2B-210ENST00000471134 POTEDQ86YR6 584 aa24.78■■□□□ 1.56
TRA2B-210ENST00000471134 MAPK8IP2Q13387 824 aaPredicted RBP23.77■■□□□ 1.4
TRA2B-210ENST00000471134 SCAF1Q9H7N4 1312 aaKnown RBP23.56■■□□□ 1.36
TRA2B-210ENST00000471134 DMRT2Q9Y5R5 561 aa23.52■■□□□ 1.36
TRA2B-210ENST00000471134 PPP4R3CPQ6ZMV5 832 aa23.38■■□□□ 1.33
TRA2B-210ENST00000471134 CNKSR2Q8WXI2 1034 aa22.85■■□□□ 1.25
TRA2B-210ENST00000471134 HOXD11P31277 338 aaPredicted RBP22.74■■□□□ 1.23
TRA2B-210ENST00000471134 RNF216Q9NWF9 866 aaPredicted RBP22.6■■□□□ 1.21
TRA2B-210ENST00000471134 DCAF8L1A6NGE4 600 aa22.51■■□□□ 1.19
TRA2B-210ENST00000471134 NCBP3Q53F19 620 aaKnown RBP22.45■■□□□ 1.18
TRA2B-210ENST00000471134 NPM3O75607 178 aaKnown RBP22.25■■□□□ 1.15
TRA2B-210ENST00000471134 KCNA4P22459 653 aa22.03■■□□□ 1.12
TRA2B-210ENST00000471134 RNF39Q9H2S5 420 aa21.98■■□□□ 1.11
TRA2B-210ENST00000471134 CACNB1Q02641 598 aaPredicted RBP21.91■■□□□ 1.1
TRA2B-210ENST00000471134 DNAJC5BQ9UF47 199 aa21.84■■□□□ 1.09
TRA2B-210ENST00000471134 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.62■■□□□ 1.052e-7■■□□□ 13.7
TRA2B-210ENST00000471134 C1QBPQ07021 282 aaKnown RBP21.61■■□□□ 1.05
TRA2B-210ENST00000471134 U3KPZ7 1027 aaPredicted RBP21.27■■□□□ 1
TRA2B-210ENST00000471134 SLC4A2P04920 1241 aa21.22■□□□□ 0.99
TRA2B-210ENST00000471134 SPINK5Q9NQ38 1064 aaPredicted RBP20.91■□□□□ 0.94
TRA2B-210ENST00000471134 CAPN15O75808 1086 aa20.79■□□□□ 0.92
TRA2B-210ENST00000471134 SLC4A1APQ9BWU0 796 aaKnown RBP20.78■□□□□ 0.92
TRA2B-210ENST00000471134 DSG3P32926 999 aa20.66■□□□□ 0.9
TRA2B-210ENST00000471134 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.58■□□□□ 0.89
TRA2B-210ENST00000471134 HNRNPUL2Q1KMD3 747 aaKnown RBP20.58■□□□□ 0.89
TRA2B-210ENST00000471134 TRHP20396 242 aaPredicted RBP20.52■□□□□ 0.88
TRA2B-210ENST00000471134 APLP2Q06481 763 aa20.52■□□□□ 0.88
TRA2B-210ENST00000471134 MYCNP04198 464 aaPredicted RBP20.51■□□□□ 0.87
TRA2B-210ENST00000471134 SAMD1Q6SPF0 538 aaPredicted RBP20.51■□□□□ 0.87
TRA2B-210ENST00000471134 ZNF219Q9P2Y4 722 aaPredicted RBP20.44■□□□□ 0.86
TRA2B-210ENST00000471134 FOXD4L1Q9NU39 408 aa20.43■□□□□ 0.86
TRA2B-210ENST00000471134 ABCB7O75027 752 aa20.39■□□□□ 0.85
TRA2B-210ENST00000471134 ZBTB22O15209 634 aa20.32■□□□□ 0.84
TRA2B-210ENST00000471134 ATF5Q9Y2D1 282 aaPredicted RBP20.14■□□□□ 0.81
TRA2B-210ENST00000471134 POLA2Q14181 598 aa20.02■□□□□ 0.8
TRA2B-210ENST00000471134 ATXN8OSP0DMR3 200 aa19.74■□□□□ 0.75
TRA2B-210ENST00000471134 RBM42Q9BTD8 480 aaKnown RBP19.6■□□□□ 0.73
TRA2B-210ENST00000471134 ZBTB12Q9Y330 459 aaPredicted RBP19.55■□□□□ 0.72
TRA2B-210ENST00000471134 CSRNP3Q8WYN3 585 aa19.51■□□□□ 0.71
TRA2B-210ENST00000471134 POTEHQ6S545 545 aa19.43■□□□□ 0.7
TRA2B-210ENST00000471134 OSCARQ8IYS5 282 aa19.42■□□□□ 0.7
TRA2B-210ENST00000471134 EHMT2Q96KQ7 1210 aa19.37■□□□□ 0.69
TRA2B-210ENST00000471134 AKT1S1Q96B36 256 aa19.24■□□□□ 0.67
TRA2B-210ENST00000471134 MKRN4PQ13434 485 aaPredicted RBP19.21■□□□□ 0.67
TRA2B-210ENST00000471134 FBLN2P98095 1184 aa19.17■□□□□ 0.66
TRA2B-210ENST00000471134 CHRDL2Q6WN34 429 aa19.16■□□□□ 0.66
TRA2B-210ENST00000471134 REM2Q8IYK8 340 aaPredicted RBP19.1■□□□□ 0.65
TRA2B-210ENST00000471134 SPDYE2BA6NHP3 402 aa19.01■□□□□ 0.63
TRA2B-210ENST00000471134 SPDYE6P0CI01 402 aa19.01■□□□□ 0.63
TRA2B-210ENST00000471134 SPDYE2Q495Y8 402 aa19.01■□□□□ 0.63
TRA2B-210ENST00000471134 PITPNM1O00562 1244 aa18.93■□□□□ 0.62
TRA2B-210ENST00000471134 SSUH2Q9Y2M2 353 aa18.84■□□□□ 0.61
TRA2B-210ENST00000471134 ZNF692Q9BU19 519 aaPredicted RBP18.82■□□□□ 0.6
TRA2B-210ENST00000471134 PIP4P2Q8N4L2 257 aa18.79■□□□□ 0.6
TRA2B-210ENST00000471134 FXR2P51116 673 aaKnown RBP eCLIP18.7■□□□□ 0.58
TRA2B-210ENST00000471134 SPDYE1Q8NFV5 336 aaPredicted RBP18.61■□□□□ 0.57
TRA2B-210ENST00000471134 CLEC11AQ9Y240 323 aa18.6■□□□□ 0.57
TRA2B-210ENST00000471134 PABPN1Q86U42 306 aaKnown RBP eCLIP18.58■□□□□ 0.56
TRA2B-210ENST00000471134 PRKAR2AP13861 404 aaKnown RBP18.41■□□□□ 0.54
TRA2B-210ENST00000471134 SPDYE4A6NLX3 237 aa18.33■□□□□ 0.52
TRA2B-210ENST00000471134 HAX1O00165 279 aa18.33■□□□□ 0.52
TRA2B-210ENST00000471134 SP7Q8TDD2 431 aaPredicted RBP18.31■□□□□ 0.52
TRA2B-210ENST00000471134 PRR29P0C7W0 189 aa18.29■□□□□ 0.52
TRA2B-210ENST00000471134 CHADLQ6NUI6 762 aa18.29■□□□□ 0.52
TRA2B-210ENST00000471134 EVX2Q03828 476 aa18.24■□□□□ 0.51
TRA2B-210ENST00000471134 C19orf67A6NJJ6 358 aa18.09■□□□□ 0.49
TRA2B-210ENST00000471134 STAG3Q9UJ98 1225 aa18.03■□□□□ 0.48
TRA2B-210ENST00000471134 FARP1Q9Y4F1 1045 aaPredicted RBP17.99■□□□□ 0.47
TRA2B-210ENST00000471134 CREBZFQ9NS37 354 aa17.98■□□□□ 0.47
TRA2B-210ENST00000471134 PROM2Q8N271 834 aa17.97■□□□□ 0.47
TRA2B-210ENST00000471134 CD44P16070 742 aaKnown RBP17.83■□□□□ 0.44
TRA2B-210ENST00000471134 GABBR2O75899 941 aa17.77■□□□□ 0.44
TRA2B-210ENST00000471134 MNX1P50219 401 aaPredicted RBP17.72■□□□□ 0.43
TRA2B-210ENST00000471134 FKBP8Q14318 412 aa17.65■□□□□ 0.42
TRA2B-210ENST00000471134 ZRANB1Q9UGI0 708 aa17.6■□□□□ 0.41
TRA2B-210ENST00000471134 ZNF579Q8NAF0 562 aaKnown RBP17.57■□□□□ 0.4
TRA2B-210ENST00000471134 NPM1P06748 294 aaKnown RBP eCLIP17.53■□□□□ 0.4
TRA2B-210ENST00000471134 POTEIP0CG38 1075 aa17.46■□□□□ 0.39
TRA2B-210ENST00000471134 PHF12Q96QT6 1004 aa17.43■□□□□ 0.38
TRA2B-210ENST00000471134 PAK3O75914 559 aaPredicted RBP17.42■□□□□ 0.38
TRA2B-210ENST00000471134 CLCN6P51797 869 aa17.42■□□□□ 0.38
TRA2B-210ENST00000471134 MIER1Q8N108 512 aa17.42■□□□□ 0.38
TRA2B-210ENST00000471134 GALR2O43603 387 aaPredicted RBP17.38■□□□□ 0.37
TRA2B-210ENST00000471134 PLCD3Q8N3E9 789 aa17.31■□□□□ 0.36
TRA2B-210ENST00000471134 PLEKHG5O94827 1062 aa17.3■□□□□ 0.36
TRA2B-210ENST00000471134 TSPYL2Q9H2G4 693 aaPredicted RBP17.3■□□□□ 0.36
TRA2B-210ENST00000471134 DCBLD2Q96PD2 775 aa17.27■□□□□ 0.36
TRA2B-210ENST00000471134 RASEFQ8IZ41 740 aa17.25■□□□□ 0.35
TRA2B-210ENST00000471134 CCDC61Q9Y6R9 512 aa17.24■□□□□ 0.35
TRA2B-210ENST00000471134 MS4A3Q96HJ5 214 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms