RNA–Protein interactions for RNA: ENST00000507017.5

SFXN1-206, Transcript of sideroflexin 1, humanhuman

TSL 5

Gene SFXN1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-206ENST00000507017 NISCHQ9Y2I1 1504 aa18.67■□□□□ 0.58
SFXN1-206ENST00000507017 CCDC180Q9P1Z9 1646 aa16.76■□□□□ 0.27
SFXN1-206ENST00000507017 ABCC9O60706 1549 aa16.38■□□□□ 0.21
SFXN1-206ENST00000507017 RB1CC1Q8TDY2 1594 aa15.83■□□□□ 0.13
SFXN1-206ENST00000507017 NACADO15069 1562 aa15.78■□□□□ 0.12
SFXN1-206ENST00000507017 MYO15BQ96JP2 1530 aa15.67■□□□□ 0.1
SFXN1-206ENST00000507017 DCAF8L2P0C7V8 631 aa15.6■□□□□ 0.09
SFXN1-206ENST00000507017 ZCCHC6Q5VYS8 1495 aaKnown RBP15.53■□□□□ 0.08
SFXN1-206ENST00000507017 DCAF1Q9Y4B6 1507 aa15.53■□□□□ 0.08
SFXN1-206ENST00000507017 UNC13AQ9UPW8 1703 aa15.32■□□□□ 0.04
SFXN1-206ENST00000507017 SHROOM4Q9ULL8 1493 aa15.29■□□□□ 0.04
SFXN1-206ENST00000507017 PABPN1Q86U42 306 aaKnown RBP eCLIP15.21■□□□□ 0.03
SFXN1-206ENST00000507017 BICRAQ9NZM4 1560 aa15.19■□□□□ 0.02
SFXN1-206ENST00000507017 SCRIBQ14160 1630 aa15.16■□□□□ 0.02
SFXN1-206ENST00000507017 DNAJC5BQ9UF47 199 aa14.99□□□□□ -0.01
SFXN1-206ENST00000507017 EIF4G1Q04637 1599 aaKnown RBP14.89□□□□□ -0.03
SFXN1-206ENST00000507017 CC2D2AQ9P2K1 1620 aa14.84□□□□□ -0.03
SFXN1-206ENST00000507017 CECR2Q9BXF3 1484 aa14.78□□□□□ -0.04
SFXN1-206ENST00000507017 BAZ1AQ9NRL2 1556 aaPredicted RBP14.56□□□□□ -0.08
SFXN1-206ENST00000507017 SMARCA2P51531 1590 aa14.54□□□□□ -0.08
SFXN1-206ENST00000507017 SMARCA4P51532 1647 aa14.52□□□□□ -0.08
SFXN1-206ENST00000507017 NCAPD3P42695 1498 aa14.5□□□□□ -0.09
SFXN1-206ENST00000507017 HMGXB3Q12766 1538 aa14.47□□□□□ -0.09
SFXN1-206ENST00000507017 ATAD2BQ9ULI0 1458 aa14.46□□□□□ -0.09
SFXN1-206ENST00000507017 PEG3Q9GZU2 1588 aa14.42□□□□□ -0.1
SFXN1-206ENST00000507017 BAZ1BQ9UIG0 1483 aaKnown RBP14.39□□□□□ -0.11
SFXN1-206ENST00000507017 MROH2BQ7Z745 1585 aa14.32□□□□□ -0.12
SFXN1-206ENST00000507017 ERCC6Q03468 1493 aa14.24□□□□□ -0.13
SFXN1-206ENST00000507017 AEBP2Q6ZN18 517 aaPredicted RBP14.21□□□□□ -0.13
SFXN1-206ENST00000507017 LAMC3Q9Y6N6 1575 aa14.2□□□□□ -0.14
SFXN1-206ENST00000507017 CUX2O14529 1486 aa14.16□□□□□ -0.14
SFXN1-206ENST00000507017 WIZO95785 1651 aa14.16□□□□□ -0.14
SFXN1-206ENST00000507017 RSF1Q96T23 1441 aaPredicted RBP14.13□□□□□ -0.15
SFXN1-206ENST00000507017 PDS5BQ9NTI5 1447 aa14.12□□□□□ -0.15
SFXN1-206ENST00000507017 TOP2AP11388 1531 aaKnown RBP14.1□□□□□ -0.15
SFXN1-206ENST00000507017 NESP48681 1621 aa14.08□□□□□ -0.16
SFXN1-206ENST00000507017 CADPSQ9ULU8 1353 aa14.08□□□□□ -0.16
SFXN1-206ENST00000507017 THOC2Q8NI27 1593 aaKnown RBP13.98□□□□□ -0.17
SFXN1-206ENST00000507017 KIF21AQ7Z4S6 1674 aa13.98□□□□□ -0.17
SFXN1-206ENST00000507017 CFTRP13569 1480 aa13.95□□□□□ -0.18
SFXN1-206ENST00000507017 CEP164Q9UPV0 1460 aa13.95□□□□□ -0.18
SFXN1-206ENST00000507017 MRC2Q9UBG0 1479 aa13.94□□□□□ -0.18
SFXN1-206ENST00000507017 FANCD2Q9BXW9 1451 aa13.91□□□□□ -0.18
SFXN1-206ENST00000507017 PRDM2Q13029 1718 aa13.9□□□□□ -0.18
SFXN1-206ENST00000507017 WDR62O43379 1518 aa13.89□□□□□ -0.19
SFXN1-206ENST00000507017 CCDC88BA6NC98 1476 aa13.86□□□□□ -0.19
SFXN1-206ENST00000507017 ABCC8Q09428 1581 aa13.78□□□□□ -0.2
SFXN1-206ENST00000507017 DNAJC5Q9H3Z4 198 aa13.77□□□□□ -0.21
SFXN1-206ENST00000507017 URB2Q14146 1524 aaKnown RBP13.72□□□□□ -0.21
SFXN1-206ENST00000507017 IFT140Q96RY7 1462 aa13.67□□□□□ -0.22
SFXN1-206ENST00000507017 DNMBPQ6XZF7 1577 aa13.67□□□□□ -0.22
SFXN1-206ENST00000507017 TOPBP1Q92547 1522 aa13.66□□□□□ -0.22
SFXN1-206ENST00000507017 SUPT5HO00267 1087 aaKnown RBP13.65□□□□□ -0.22
SFXN1-206ENST00000507017 WDR97A6NE52 1622 aa13.55□□□□□ -0.24
SFXN1-206ENST00000507017 POLA1P09884 1462 aaPredicted RBP13.52□□□□□ -0.25
SFXN1-206ENST00000507017 EIF4G3O43432 1585 aaKnown RBP13.51□□□□□ -0.25
SFXN1-206ENST00000507017 OSCARQ8IYS5 282 aa13.5□□□□□ -0.25
SFXN1-206ENST00000507017 TARBP1Q13395 1621 aaKnown RBP13.5□□□□□ -0.25
SFXN1-206ENST00000507017 SOGA1O94964 1423 aa13.48□□□□□ -0.25
SFXN1-206ENST00000507017 ZNF608Q9ULD9 1512 aaPredicted RBP13.48□□□□□ -0.25
SFXN1-206ENST00000507017 FGD5Q6ZNL6 1462 aa13.48□□□□□ -0.25
SFXN1-206ENST00000507017 CUX1P39880 1505 aa13.46□□□□□ -0.25
SFXN1-206ENST00000507017 AQRO60306 1485 aaKnown RBP eCLIP13.4□□□□□ -0.261e-6■■■■□ 24.6
SFXN1-206ENST00000507017 RAD54L2Q9Y4B4 1467 aa13.4□□□□□ -0.26
SFXN1-206ENST00000507017 WRNQ14191 1432 aaPredicted RBP eCLIP13.39□□□□□ -0.27
SFXN1-206ENST00000507017 GRIN2BQ13224 1484 aa13.39□□□□□ -0.27
SFXN1-206ENST00000507017 MAGI1Q96QZ7 1491 aaPredicted RBP13.39□□□□□ -0.27
SFXN1-206ENST00000507017 TOP2BQ02880 1626 aa13.38□□□□□ -0.27
SFXN1-206ENST00000507017 BIVM-ERCC5R4GMW8 1640 aa13.38□□□□□ -0.27
SFXN1-206ENST00000507017 ABCA10Q8WWZ4 1543 aa13.38□□□□□ -0.27
SFXN1-206ENST00000507017 TDRD9Q8NDG6 1382 aaKnown RBP13.37□□□□□ -0.27
SFXN1-206ENST00000507017 GAPVD1Q14C86 1478 aa13.34□□□□□ -0.27
SFXN1-206ENST00000507017 SNAPC4Q5SXM2 1469 aa13.34□□□□□ -0.27
SFXN1-206ENST00000507017 CHD1O14646 1710 aa13.33□□□□□ -0.27
SFXN1-206ENST00000507017 FBLN2P98095 1184 aa13.32□□□□□ -0.28
SFXN1-206ENST00000507017 SYNJ1O43426 1573 aa13.32□□□□□ -0.28
SFXN1-206ENST00000507017 ABCA5Q8WWZ7 1642 aa13.31□□□□□ -0.28
SFXN1-206ENST00000507017 PBRM1Q86U86 1689 aa13.31□□□□□ -0.28
SFXN1-206ENST00000507017 SYNJ2O15056 1496 aa13.31□□□□□ -0.28
SFXN1-206ENST00000507017 CHMP7Q8WUX9 453 aaPredicted RBP13.31□□□□□ -0.28
SFXN1-206ENST00000507017 CHIC1Q5VXU3 224 aa13.3□□□□□ -0.28
SFXN1-206ENST00000507017 RIMBP3CA6NJZ7 1639 aa13.25□□□□□ -0.29
SFXN1-206ENST00000507017 RIMBP3BA6NNM3 1639 aa13.25□□□□□ -0.29
SFXN1-206ENST00000507017 RIMBP3Q9UFD9 1639 aa13.25□□□□□ -0.29
SFXN1-206ENST00000507017 ARHGEF11O15085 1522 aa13.25□□□□□ -0.29
SFXN1-206ENST00000507017 ERICH3Q5RHP9 1530 aa13.25□□□□□ -0.29
SFXN1-206ENST00000507017 TRIM41Q8WV44 630 aa13.24□□□□□ -0.29
SFXN1-206ENST00000507017 FHAD1B1AJZ9 1412 aa13.22□□□□□ -0.29
SFXN1-206ENST00000507017 ADAMTS12P58397 1594 aa13.21□□□□□ -0.29
SFXN1-206ENST00000507017 CLASP1Q7Z460 1538 aa13.2□□□□□ -0.3
SFXN1-206ENST00000507017 GRIN2AQ12879 1464 aa13.18□□□□□ -0.3
SFXN1-206ENST00000507017 KIF27Q86VH2 1401 aa13.17□□□□□ -0.3
SFXN1-206ENST00000507017 CUL7Q14999 1698 aa13.13□□□□□ -0.31
SFXN1-206ENST00000507017 NUP160Q12769 1436 aa13.13□□□□□ -0.31
SFXN1-206ENST00000507017 ARAP1Q96P48 1450 aa13.1□□□□□ -0.31
SFXN1-206ENST00000507017 CYB5RLQ6IPT4 315 aa13.09□□□□□ -0.31
SFXN1-206ENST00000507017 CEP170Q5SW79 1584 aa13.07□□□□□ -0.32
SFXN1-206ENST00000507017 SHROOM2Q13796 1616 aa13.04□□□□□ -0.32
SFXN1-206ENST00000507017 IGF1RP08069 1367 aa13.02□□□□□ -0.33
SFXN1-206ENST00000507017 RUSC2Q8N2Y8 1516 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms