RNA–Protein interactions for RNA: ENST00000431066.5

SRSF7-206, Transcript of serine and arginine rich splicing factor 7, humanhuman

TSL 5

Gene SRSF7, Length 1,847 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF7-206ENST00000431066 AEBP2Q6ZN18 517 aaPredicted RBP26.88■■□□□ 1.89
SRSF7-206ENST00000431066 CHIC1Q5VXU3 224 aa25.26■■□□□ 1.63
SRSF7-206ENST00000431066 NISCHQ9Y2I1 1504 aa25.23■■□□□ 1.63
SRSF7-206ENST00000431066 SENP3Q9H4L4 574 aaPredicted RBP22.95■■□□□ 1.26
SRSF7-206ENST00000431066 PHF23Q9BUL5 403 aaPredicted RBP22.62■■□□□ 1.21
SRSF7-206ENST00000431066 CCDC180Q9P1Z9 1646 aa22.02■■□□□ 1.12
SRSF7-206ENST00000431066 FOXD1Q16676 465 aa21.43■■□□□ 1.02
SRSF7-206ENST00000431066 ZCCHC6Q5VYS8 1495 aaKnown RBP21.15■□□□□ 0.98
SRSF7-206ENST00000431066 ABCC9O60706 1549 aa21.1■□□□□ 0.97
SRSF7-206ENST00000431066 DCAF8L2P0C7V8 631 aa21.02■□□□□ 0.96
SRSF7-206ENST00000431066 DCAF1Q9Y4B6 1507 aa20.78■□□□□ 0.92
SRSF7-206ENST00000431066 SHROOM4Q9ULL8 1493 aa20.61■□□□□ 0.89
SRSF7-206ENST00000431066 MYO15BQ96JP2 1530 aa20.58■□□□□ 0.88
SRSF7-206ENST00000431066 NACADO15069 1562 aa20.56■□□□□ 0.88
SRSF7-206ENST00000431066 RB1CC1Q8TDY2 1594 aa20.45■□□□□ 0.86
SRSF7-206ENST00000431066 SCRIBQ14160 1630 aa20.35■□□□□ 0.85
SRSF7-206ENST00000431066 POTEDQ86YR6 584 aa20.17■□□□□ 0.82
SRSF7-206ENST00000431066 MSH5O43196 834 aa20.16■□□□□ 0.82
SRSF7-206ENST00000431066 UNC13AQ9UPW8 1703 aa20.05■□□□□ 0.8
SRSF7-206ENST00000431066 PLPPR3Q6T4P5 718 aa20.02■□□□□ 0.79
SRSF7-206ENST00000431066 PIAS4Q8N2W9 510 aaPredicted RBP19.9■□□□□ 0.78
SRSF7-206ENST00000431066 PABPN1Q86U42 306 aaKnown RBP eCLIP19.9■□□□□ 0.788e-6■□□□□ 8.9
SRSF7-206ENST00000431066 BICRAQ9NZM4 1560 aa19.85■□□□□ 0.77
SRSF7-206ENST00000431066 PPP6R1Q9UPN7 881 aa19.83■□□□□ 0.77
SRSF7-206ENST00000431066 SUPT5HO00267 1087 aaKnown RBP19.72■□□□□ 0.75
SRSF7-206ENST00000431066 ADRA2BP18089 450 aa19.72■□□□□ 0.75
SRSF7-206ENST00000431066 CECR2Q9BXF3 1484 aa19.67■□□□□ 0.74
SRSF7-206ENST00000431066 RSF1Q96T23 1441 aaPredicted RBP19.52■□□□□ 0.72
SRSF7-206ENST00000431066 MROH2BQ7Z745 1585 aa19.52■□□□□ 0.71
SRSF7-206ENST00000431066 BAZ1AQ9NRL2 1556 aaPredicted RBP19.48■□□□□ 0.71
SRSF7-206ENST00000431066 SMARCA4P51532 1647 aa19.43■□□□□ 0.7
SRSF7-206ENST00000431066 WIZO95785 1651 aa19.36■□□□□ 0.69
SRSF7-206ENST00000431066 EIF4G1Q04637 1599 aaKnown RBP19.27■□□□□ 0.68
SRSF7-206ENST00000431066 ATAD2BQ9ULI0 1458 aa19.16■□□□□ 0.66
SRSF7-206ENST00000431066 PEG3Q9GZU2 1588 aa19.15■□□□□ 0.66
SRSF7-206ENST00000431066 TOP2AP11388 1531 aaKnown RBP19.12■□□□□ 0.65
SRSF7-206ENST00000431066 SMARCA2P51531 1590 aa19.12■□□□□ 0.65
SRSF7-206ENST00000431066 BAZ1BQ9UIG0 1483 aaKnown RBP19.05■□□□□ 0.64
SRSF7-206ENST00000431066 CC2D2AQ9P2K1 1620 aa19.05■□□□□ 0.64
SRSF7-206ENST00000431066 NCAPD3P42695 1498 aa18.98■□□□□ 0.63
SRSF7-206ENST00000431066 CCDC88BA6NC98 1476 aa18.94■□□□□ 0.62
SRSF7-206ENST00000431066 HMGXB3Q12766 1538 aa18.94■□□□□ 0.62
SRSF7-206ENST00000431066 DNAJC5BQ9UF47 199 aa18.77■□□□□ 0.59
SRSF7-206ENST00000431066 ABCC8Q09428 1581 aa18.54■□□□□ 0.56
SRSF7-206ENST00000431066 CFTRP13569 1480 aa18.53■□□□□ 0.56
SRSF7-206ENST00000431066 CADPSQ9ULU8 1353 aa18.51■□□□□ 0.55
SRSF7-206ENST00000431066 TRIM41Q8WV44 630 aa18.51■□□□□ 0.55
SRSF7-206ENST00000431066 NESP48681 1621 aa18.47■□□□□ 0.55
SRSF7-206ENST00000431066 PRDM2Q13029 1718 aa18.41■□□□□ 0.54
SRSF7-206ENST00000431066 WRNQ14191 1432 aaPredicted RBP eCLIP18.38■□□□□ 0.538e-7■■□□□ 13.9
SRSF7-206ENST00000431066 LAMC3Q9Y6N6 1575 aa18.37■□□□□ 0.53
SRSF7-206ENST00000431066 SYNJ1O43426 1573 aa18.34■□□□□ 0.53
SRSF7-206ENST00000431066 FANCD2Q9BXW9 1451 aa18.33■□□□□ 0.53
SRSF7-206ENST00000431066 CUX1P39880 1505 aa18.26■□□□□ 0.51
SRSF7-206ENST00000431066 PDS5BQ9NTI5 1447 aa18.25■□□□□ 0.51
SRSF7-206ENST00000431066 FAM9AQ8IZU1 332 aaPredicted RBP18.24■□□□□ 0.51
SRSF7-206ENST00000431066 TOP2BQ02880 1626 aa18.24■□□□□ 0.51
SRSF7-206ENST00000431066 CEP164Q9UPV0 1460 aa18.23■□□□□ 0.51
SRSF7-206ENST00000431066 KIF21AQ7Z4S6 1674 aa18.22■□□□□ 0.51
SRSF7-206ENST00000431066 BIVM-ERCC5R4GMW8 1640 aa18.21■□□□□ 0.51
SRSF7-206ENST00000431066 MAPK8IP2Q13387 824 aaPredicted RBP18.21■□□□□ 0.51
SRSF7-206ENST00000431066 DMRT2Q9Y5R5 561 aa18.18■□□□□ 0.5
SRSF7-206ENST00000431066 SOGA1O94964 1423 aa18.15■□□□□ 0.5
SRSF7-206ENST00000431066 URB2Q14146 1524 aaKnown RBP18.12■□□□□ 0.49
SRSF7-206ENST00000431066 DNMBPQ6XZF7 1577 aa18.11■□□□□ 0.49
SRSF7-206ENST00000431066 TOPBP1Q92547 1522 aa18.11■□□□□ 0.49
SRSF7-206ENST00000431066 RUSC2Q8N2Y8 1516 aa18.1■□□□□ 0.49
SRSF7-206ENST00000431066 ERCC6Q03468 1493 aa18.09■□□□□ 0.49
SRSF7-206ENST00000431066 FGD5Q6ZNL6 1462 aa18.09■□□□□ 0.49
SRSF7-206ENST00000431066 LOC105371045A0A1W2PR82 267 aa18.07■□□□□ 0.48
SRSF7-206ENST00000431066 EHMT2Q96KQ7 1210 aa18.07■□□□□ 0.48
SRSF7-206ENST00000431066 MRC2Q9UBG0 1479 aa18.04■□□□□ 0.48
SRSF7-206ENST00000431066 SCAF1Q9H7N4 1312 aaKnown RBP18.03■□□□□ 0.48
SRSF7-206ENST00000431066 POLA1P09884 1462 aaPredicted RBP18.01■□□□□ 0.47
SRSF7-206ENST00000431066 RAD54L2Q9Y4B4 1467 aa18■□□□□ 0.47
SRSF7-206ENST00000431066 EEA1Q15075 1411 aa17.98■□□□□ 0.47
SRSF7-206ENST00000431066 CSRNP3Q8WYN3 585 aa17.95■□□□□ 0.46
SRSF7-206ENST00000431066 CUX2O14529 1486 aa17.95■□□□□ 0.46
SRSF7-206ENST00000431066 THOC2Q8NI27 1593 aaKnown RBP17.94■□□□□ 0.46
SRSF7-206ENST00000431066 WDR62O43379 1518 aa17.94■□□□□ 0.46
SRSF7-206ENST00000431066 KIF27Q86VH2 1401 aa17.92■□□□□ 0.46
SRSF7-206ENST00000431066 ABCA10Q8WWZ4 1543 aa17.89■□□□□ 0.45
SRSF7-206ENST00000431066 WDR97A6NE52 1622 aa17.84■□□□□ 0.45
SRSF7-206ENST00000431066 TARBP1Q13395 1621 aaKnown RBP17.84■□□□□ 0.45
SRSF7-206ENST00000431066 TDRD9Q8NDG6 1382 aaKnown RBP17.83■□□□□ 0.45
SRSF7-206ENST00000431066 IGF1RP08069 1367 aa17.79■□□□□ 0.44
SRSF7-206ENST00000431066 KIF21BO75037 1637 aa17.78■□□□□ 0.44
SRSF7-206ENST00000431066 IFT140Q96RY7 1462 aa17.78■□□□□ 0.44
SRSF7-206ENST00000431066 GOLGA3Q08378 1498 aa17.77■□□□□ 0.44
SRSF7-206ENST00000431066 RAPGEF2Q9Y4G8 1499 aa17.77■□□□□ 0.44
SRSF7-206ENST00000431066 UBTFP17480 764 aaKnown RBP17.77■□□□□ 0.43
SRSF7-206ENST00000431066 ABCA5Q8WWZ7 1642 aa17.77■□□□□ 0.43
SRSF7-206ENST00000431066 ZNF608Q9ULD9 1512 aaPredicted RBP17.75■□□□□ 0.43
SRSF7-206ENST00000431066 AQRO60306 1485 aaKnown RBP eCLIP17.75■□□□□ 0.437e-7■■■■□ 20.9
SRSF7-206ENST00000431066 GAPVD1Q14C86 1478 aa17.75■□□□□ 0.43
SRSF7-206ENST00000431066 PRXQ9BXM0 1461 aa17.75■□□□□ 0.43
SRSF7-206ENST00000431066 CARMIL1Q5VZK9 1371 aa17.7■□□□□ 0.42
SRSF7-206ENST00000431066 ERICH3Q5RHP9 1530 aa17.68■□□□□ 0.42
SRSF7-206ENST00000431066 TNIKQ9UKE5 1360 aa17.67■□□□□ 0.42
SRSF7-206ENST00000431066 PBRM1Q86U86 1689 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms