RNA–Protein interactions for RNA: ENST00000425778.5

SRSF7-204, Transcript of serine and arginine rich splicing factor 7, humanhuman

TSL 2

Gene SRSF7, Length 2,857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF7-204ENST00000425778 NISCHQ9Y2I1 1504 aa17.95■□□□□ 0.46
SRSF7-204ENST00000425778 SHROOM4Q9ULL8 1493 aa15.74■□□□□ 0.11
SRSF7-204ENST00000425778 DCAF8L2P0C7V8 631 aa15.66■□□□□ 0.1
SRSF7-204ENST00000425778 SUPT5HO00267 1087 aaKnown RBP15.38■□□□□ 0.05
SRSF7-204ENST00000425778 PELP1Q8IZL8 1130 aaKnown RBP15.26■□□□□ 0.03
SRSF7-204ENST00000425778 ZCCHC6Q5VYS8 1495 aaKnown RBP15.08■□□□□ 0
SRSF7-204ENST00000425778 CCDC180Q9P1Z9 1646 aa15.03■□□□□ -0
SRSF7-204ENST00000425778 MYT1Q01538 1121 aa14.84□□□□□ -0.03
SRSF7-204ENST00000425778 HRCP23327 699 aa14.83□□□□□ -0.04
SRSF7-204ENST00000425778 ABCC9O60706 1549 aa14.68□□□□□ -0.06
SRSF7-204ENST00000425778 PPARGC1BQ86YN6 1023 aaKnown RBP14.65□□□□□ -0.06
SRSF7-204ENST00000425778 CHIC1Q5VXU3 224 aa14.63□□□□□ -0.07
SRSF7-204ENST00000425778 SCRIBQ14160 1630 aa14.49□□□□□ -0.09
SRSF7-204ENST00000425778 SCAF1Q9H7N4 1312 aaKnown RBP14.49□□□□□ -0.09
SRSF7-204ENST00000425778 MYO15BQ96JP2 1530 aa14.46□□□□□ -0.09
SRSF7-204ENST00000425778 DCAF1Q9Y4B6 1507 aa14.46□□□□□ -0.09
SRSF7-204ENST00000425778 LOC105371045A0A1W2PR82 267 aa14.43□□□□□ -0.1
SRSF7-204ENST00000425778 EHMT2Q96KQ7 1210 aa14.41□□□□□ -0.1
SRSF7-204ENST00000425778 FAM9AQ8IZU1 332 aaPredicted RBP14.32□□□□□ -0.12
SRSF7-204ENST00000425778 PCGF6Q9BYE7 350 aa14.29□□□□□ -0.12
SRSF7-204ENST00000425778 RSF1Q96T23 1441 aaPredicted RBP14.26□□□□□ -0.13
SRSF7-204ENST00000425778 CECR2Q9BXF3 1484 aa14.23□□□□□ -0.13
SRSF7-204ENST00000425778 PABPN1Q86U42 306 aaKnown RBP eCLIP14.22□□□□□ -0.138e-6■□□□□ 8.9
SRSF7-204ENST00000425778 TRIM41Q8WV44 630 aa14.18□□□□□ -0.14
SRSF7-204ENST00000425778 NACADO15069 1562 aa14.09□□□□□ -0.15
SRSF7-204ENST00000425778 TTBK1Q5TCY1 1321 aaPredicted RBP14.09□□□□□ -0.15
SRSF7-204ENST00000425778 MROH2BQ7Z745 1585 aa14.07□□□□□ -0.16
SRSF7-204ENST00000425778 RB1CC1Q8TDY2 1594 aa14.05□□□□□ -0.16
SRSF7-204ENST00000425778 PRKCSHP14314 528 aaPredicted RBP14□□□□□ -0.17
SRSF7-204ENST00000425778 BCL11AQ9H165 835 aa13.99□□□□□ -0.17
SRSF7-204ENST00000425778 WIZO95785 1651 aa13.96□□□□□ -0.18
SRSF7-204ENST00000425778 ACIN1Q9UKV3 1341 aaKnown RBP13.86□□□□□ -0.19
SRSF7-204ENST00000425778 GTF3C3Q9Y5Q9 886 aa13.85□□□□□ -0.19
SRSF7-204ENST00000425778 NEUROD1Q13562 356 aa13.85□□□□□ -0.19
SRSF7-204ENST00000425778 BAZ1AQ9NRL2 1556 aaPredicted RBP13.74□□□□□ -0.21
SRSF7-204ENST00000425778 CENPBP07199 599 aaPredicted RBP13.73□□□□□ -0.21
SRSF7-204ENST00000425778 TRIM26Q12899 539 aaPredicted RBP13.72□□□□□ -0.21
SRSF7-204ENST00000425778 CCDC88BA6NC98 1476 aa13.71□□□□□ -0.21
SRSF7-204ENST00000425778 ABCC8Q09428 1581 aa13.7□□□□□ -0.22
SRSF7-204ENST00000425778 UNC13AQ9UPW8 1703 aa13.7□□□□□ -0.22
SRSF7-204ENST00000425778 RANGAP1P46060 587 aaPredicted RBP13.68□□□□□ -0.22
SRSF7-204ENST00000425778 SMARCA4P51532 1647 aa13.66□□□□□ -0.22
SRSF7-204ENST00000425778 BICRAQ9NZM4 1560 aa13.64□□□□□ -0.23
SRSF7-204ENST00000425778 UBTFP17480 764 aaKnown RBP13.61□□□□□ -0.23
SRSF7-204ENST00000425778 ZEB1P37275 1124 aaPredicted RBP13.61□□□□□ -0.23
SRSF7-204ENST00000425778 SOGA1O94964 1423 aa13.59□□□□□ -0.23
SRSF7-204ENST00000425778 TOP2AP11388 1531 aaKnown RBP13.57□□□□□ -0.24
SRSF7-204ENST00000425778 RUSC2Q8N2Y8 1516 aa13.56□□□□□ -0.24
SRSF7-204ENST00000425778 SMARCA2P51531 1590 aa13.55□□□□□ -0.24
SRSF7-204ENST00000425778 ERICH6Q7L0X2 663 aa13.51□□□□□ -0.25
SRSF7-204ENST00000425778 CSRNP3Q8WYN3 585 aa13.5□□□□□ -0.25
SRSF7-204ENST00000425778 ATAD2BQ9ULI0 1458 aa13.46□□□□□ -0.25
SRSF7-204ENST00000425778 ANP32EQ9BTT0 268 aa13.46□□□□□ -0.25
SRSF7-204ENST00000425778 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.46□□□□□ -0.26
SRSF7-204ENST00000425778 BAZ1BQ9UIG0 1483 aaKnown RBP13.44□□□□□ -0.26
SRSF7-204ENST00000425778 EIF4G1Q04637 1599 aaKnown RBP13.42□□□□□ -0.26
SRSF7-204ENST00000425778 APLP2Q06481 763 aa13.42□□□□□ -0.26
SRSF7-204ENST00000425778 WRNQ14191 1432 aaPredicted RBP eCLIP13.41□□□□□ -0.268e-7■■□□□ 13.9
SRSF7-204ENST00000425778 CEP162Q5TB80 1403 aa13.34□□□□□ -0.27
SRSF7-204ENST00000425778 CCER1Q8TC90 406 aaPredicted RBP13.33□□□□□ -0.28
SRSF7-204ENST00000425778 SYNJ1O43426 1573 aa13.28□□□□□ -0.28
SRSF7-204ENST00000425778 YTHDC1Q96MU7 727 aaKnown RBP13.28□□□□□ -0.28
SRSF7-204ENST00000425778 DIEXFQ68CQ4 756 aaKnown RBP13.27□□□□□ -0.28
SRSF7-204ENST00000425778 HNRNPUL2Q1KMD3 747 aaKnown RBP13.27□□□□□ -0.29
SRSF7-204ENST00000425778 TNIKQ9UKE5 1360 aa13.25□□□□□ -0.29
SRSF7-204ENST00000425778 PEG3Q9GZU2 1588 aa13.24□□□□□ -0.29
SRSF7-204ENST00000425778 DNAJC5BQ9UF47 199 aa13.21□□□□□ -0.3
SRSF7-204ENST00000425778 RAPGEF2Q9Y4G8 1499 aa13.19□□□□□ -0.3
SRSF7-204ENST00000425778 GOLGA3Q08378 1498 aa13.18□□□□□ -0.3
SRSF7-204ENST00000425778 NCAPD3P42695 1498 aa13.16□□□□□ -0.3
SRSF7-204ENST00000425778 CLIP1P30622 1438 aa13.15□□□□□ -0.3
SRSF7-204ENST00000425778 EEA1Q15075 1411 aa13.15□□□□□ -0.3
SRSF7-204ENST00000425778 P3H3Q8IVL6 736 aa13.12□□□□□ -0.31
SRSF7-204ENST00000425778 CEP164Q9UPV0 1460 aa13.11□□□□□ -0.31
SRSF7-204ENST00000425778 TSHZ2Q9NRE2 1034 aa13.1□□□□□ -0.31
SRSF7-204ENST00000425778 ATP1B4Q9UN42 357 aaPredicted RBP13.1□□□□□ -0.31
SRSF7-204ENST00000425778 ITGAEP38570 1179 aa13.09□□□□□ -0.31
SRSF7-204ENST00000425778 ANO8Q9HCE9 1232 aaPredicted RBP13.09□□□□□ -0.31
SRSF7-204ENST00000425778 KANK4Q5T7N3 995 aaPredicted RBP13.06□□□□□ -0.32
SRSF7-204ENST00000425778 CUX1P39880 1505 aa13.06□□□□□ -0.32
SRSF7-204ENST00000425778 CFTRP13569 1480 aa13.03□□□□□ -0.32
SRSF7-204ENST00000425778 CADPSQ9ULU8 1353 aa13.02□□□□□ -0.32
SRSF7-204ENST00000425778 TOP2BQ02880 1626 aa13.01□□□□□ -0.33
SRSF7-204ENST00000425778 NESP48681 1621 aa13□□□□□ -0.33
SRSF7-204ENST00000425778 HMGXB3Q12766 1538 aa13□□□□□ -0.33
SRSF7-204ENST00000425778 CC2D2AQ9P2K1 1620 aa12.99□□□□□ -0.33
SRSF7-204ENST00000425778 CUX2O14529 1486 aa12.99□□□□□ -0.33
SRSF7-204ENST00000425778 KIF27Q86VH2 1401 aa12.99□□□□□ -0.33
SRSF7-204ENST00000425778 SUPT16HQ9Y5B9 1047 aaKnown RBP12.97□□□□□ -0.33
SRSF7-204ENST00000425778 VPS8Q8N3P4 1428 aa12.97□□□□□ -0.33
SRSF7-204ENST00000425778 KIF21BO75037 1637 aa12.94□□□□□ -0.34
SRSF7-204ENST00000425778 IGF1RP08069 1367 aa12.94□□□□□ -0.34
SRSF7-204ENST00000425778 PRXQ9BXM0 1461 aa12.93□□□□□ -0.34
SRSF7-204ENST00000425778 RAD54L2Q9Y4B4 1467 aa12.93□□□□□ -0.34
SRSF7-204ENST00000425778 FGD5Q6ZNL6 1462 aa12.9□□□□□ -0.34
SRSF7-204ENST00000425778 ARAP1Q96P48 1450 aa12.9□□□□□ -0.34
SRSF7-204ENST00000425778 CARMIL1Q5VZK9 1371 aa12.9□□□□□ -0.34
SRSF7-204ENST00000425778 FANCD2Q9BXW9 1451 aa12.89□□□□□ -0.35
SRSF7-204ENST00000425778 MIER1Q8N108 512 aa12.88□□□□□ -0.35
SRSF7-204ENST00000425778 BIVM-ERCC5R4GMW8 1640 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms