RNA–Protein interactions for RNA: ENST00000583697.1

CDK5RAP3-229, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 852 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-229ENST00000583697 NISCHQ9Y2I1 1504 aa21.8■■□□□ 1.08
CDK5RAP3-229ENST00000583697 CCDC180Q9P1Z9 1646 aa19.67■□□□□ 0.74
CDK5RAP3-229ENST00000583697 ABCC9O60706 1549 aa19.51■□□□□ 0.71
CDK5RAP3-229ENST00000583697 RB1CC1Q8TDY2 1594 aa18.66■□□□□ 0.58
CDK5RAP3-229ENST00000583697 NACADO15069 1562 aa18.51■□□□□ 0.55
CDK5RAP3-229ENST00000583697 DCAF8L2P0C7V8 631 aa18.29■□□□□ 0.52
CDK5RAP3-229ENST00000583697 UNC13AQ9UPW8 1703 aa18.26■□□□□ 0.51
CDK5RAP3-229ENST00000583697 MYO15BQ96JP2 1530 aa18.25■□□□□ 0.51
CDK5RAP3-229ENST00000583697 ZCCHC6Q5VYS8 1495 aaKnown RBP18.12■□□□□ 0.49
CDK5RAP3-229ENST00000583697 DNAJC5BQ9UF47 199 aa18.08■□□□□ 0.48
CDK5RAP3-229ENST00000583697 PABPN1Q86U42 306 aaKnown RBP eCLIP18.07■□□□□ 0.482e-10■■□□□ 14.3
CDK5RAP3-229ENST00000583697 BICRAQ9NZM4 1560 aa18.04■□□□□ 0.48
CDK5RAP3-229ENST00000583697 DCAF1Q9Y4B6 1507 aa18.04■□□□□ 0.48
CDK5RAP3-229ENST00000583697 SCRIBQ14160 1630 aa17.89■□□□□ 0.45
CDK5RAP3-229ENST00000583697 SHROOM4Q9ULL8 1493 aa17.88■□□□□ 0.45
CDK5RAP3-229ENST00000583697 CC2D2AQ9P2K1 1620 aa17.66■□□□□ 0.42
CDK5RAP3-229ENST00000583697 EIF4G1Q04637 1599 aaKnown RBP17.65■□□□□ 0.42
CDK5RAP3-229ENST00000583697 CECR2Q9BXF3 1484 aa17.56■□□□□ 0.4
CDK5RAP3-229ENST00000583697 SMARCA4P51532 1647 aa17.06■□□□□ 0.32
CDK5RAP3-229ENST00000583697 SMARCA2P51531 1590 aa17.02■□□□□ 0.31
CDK5RAP3-229ENST00000583697 NCAPD3P42695 1498 aa17.01■□□□□ 0.31
CDK5RAP3-229ENST00000583697 HMGXB3Q12766 1538 aa16.99■□□□□ 0.31
CDK5RAP3-229ENST00000583697 ATAD2BQ9ULI0 1458 aa16.99■□□□□ 0.31
CDK5RAP3-229ENST00000583697 BAZ1AQ9NRL2 1556 aaPredicted RBP16.98■□□□□ 0.31
CDK5RAP3-229ENST00000583697 ERCC6Q03468 1493 aa16.89■□□□□ 0.29
CDK5RAP3-229ENST00000583697 BAZ1BQ9UIG0 1483 aaKnown RBP16.88■□□□□ 0.29
CDK5RAP3-229ENST00000583697 PEG3Q9GZU2 1588 aa16.87■□□□□ 0.29
CDK5RAP3-229ENST00000583697 CUX2O14529 1486 aa16.83■□□□□ 0.28
CDK5RAP3-229ENST00000583697 MROH2BQ7Z745 1585 aa16.79■□□□□ 0.28
CDK5RAP3-229ENST00000583697 NESP48681 1621 aa16.74■□□□□ 0.27
CDK5RAP3-229ENST00000583697 LAMC3Q9Y6N6 1575 aa16.73■□□□□ 0.27
CDK5RAP3-229ENST00000583697 THOC2Q8NI27 1593 aaKnown RBP16.67■□□□□ 0.26
CDK5RAP3-229ENST00000583697 KIF21AQ7Z4S6 1674 aa16.65■□□□□ 0.26
CDK5RAP3-229ENST00000583697 WIZO95785 1651 aa16.64■□□□□ 0.25
CDK5RAP3-229ENST00000583697 DNAJC5Q9H3Z4 198 aa16.62■□□□□ 0.25
CDK5RAP3-229ENST00000583697 PDS5BQ9NTI5 1447 aa16.57■□□□□ 0.24
CDK5RAP3-229ENST00000583697 CADPSQ9ULU8 1353 aa16.49■□□□□ 0.23
CDK5RAP3-229ENST00000583697 TOP2AP11388 1531 aaKnown RBP16.45■□□□□ 0.22
CDK5RAP3-229ENST00000583697 MRC2Q9UBG0 1479 aa16.45■□□□□ 0.22
CDK5RAP3-229ENST00000583697 WDR62O43379 1518 aa16.43■□□□□ 0.22
CDK5RAP3-229ENST00000583697 RSF1Q96T23 1441 aaPredicted RBP16.42■□□□□ 0.22
CDK5RAP3-229ENST00000583697 CEP164Q9UPV0 1460 aa16.42■□□□□ 0.22
CDK5RAP3-229ENST00000583697 FANCD2Q9BXW9 1451 aa16.36■□□□□ 0.21
CDK5RAP3-229ENST00000583697 PRDM2Q13029 1718 aa16.36■□□□□ 0.21
CDK5RAP3-229ENST00000583697 CFTRP13569 1480 aa16.34■□□□□ 0.21
CDK5RAP3-229ENST00000583697 URB2Q14146 1524 aaKnown RBP16.2■□□□□ 0.18
CDK5RAP3-229ENST00000583697 CCDC88BA6NC98 1476 aa16.17■□□□□ 0.18
CDK5RAP3-229ENST00000583697 TOPBP1Q92547 1522 aa16.05■□□□□ 0.16
CDK5RAP3-229ENST00000583697 IFT140Q96RY7 1462 aa16.05■□□□□ 0.16
CDK5RAP3-229ENST00000583697 ABCC8Q09428 1581 aa16.04■□□□□ 0.16
CDK5RAP3-229ENST00000583697 DNMBPQ6XZF7 1577 aa16.04■□□□□ 0.16
CDK5RAP3-229ENST00000583697 EIF4G3O43432 1585 aaKnown RBP16.01■□□□□ 0.15
CDK5RAP3-229ENST00000583697 ZNF608Q9ULD9 1512 aaPredicted RBP15.99■□□□□ 0.15
CDK5RAP3-229ENST00000583697 TRIM41Q8WV44 630 aa15.97■□□□□ 0.15
CDK5RAP3-229ENST00000583697 OSCARQ8IYS5 282 aa15.95■□□□□ 0.14
CDK5RAP3-229ENST00000583697 TARBP1Q13395 1621 aaKnown RBP15.93■□□□□ 0.14
CDK5RAP3-229ENST00000583697 POLA1P09884 1462 aaPredicted RBP15.9■□□□□ 0.14
CDK5RAP3-229ENST00000583697 CHD1O14646 1710 aa15.89■□□□□ 0.13
CDK5RAP3-229ENST00000583697 RIMBP3CA6NJZ7 1639 aa15.87■□□□□ 0.13
CDK5RAP3-229ENST00000583697 RIMBP3BA6NNM3 1639 aa15.87■□□□□ 0.13
CDK5RAP3-229ENST00000583697 RIMBP3Q9UFD9 1639 aa15.87■□□□□ 0.13
CDK5RAP3-229ENST00000583697 WDR97A6NE52 1622 aa15.84■□□□□ 0.13
CDK5RAP3-229ENST00000583697 AQRO60306 1485 aaKnown RBP eCLIP15.82■□□□□ 0.129e-9■■■■□ 25
CDK5RAP3-229ENST00000583697 FGD5Q6ZNL6 1462 aa15.81■□□□□ 0.12
CDK5RAP3-229ENST00000583697 ARHGEF11O15085 1522 aa15.8■□□□□ 0.12
CDK5RAP3-229ENST00000583697 RAD54L2Q9Y4B4 1467 aa15.79■□□□□ 0.12
CDK5RAP3-229ENST00000583697 CUX1P39880 1505 aa15.78■□□□□ 0.12
CDK5RAP3-229ENST00000583697 SOGA1O94964 1423 aa15.77■□□□□ 0.12
CDK5RAP3-229ENST00000583697 SNAPC4Q5SXM2 1469 aa15.74■□□□□ 0.11
CDK5RAP3-229ENST00000583697 PBRM1Q86U86 1689 aa15.73■□□□□ 0.11
CDK5RAP3-229ENST00000583697 TDRD9Q8NDG6 1382 aaKnown RBP15.72■□□□□ 0.11
CDK5RAP3-229ENST00000583697 FBLN2P98095 1184 aa15.71■□□□□ 0.11
CDK5RAP3-229ENST00000583697 MAGI1Q96QZ7 1491 aaPredicted RBP15.71■□□□□ 0.1
CDK5RAP3-229ENST00000583697 SUPT5HO00267 1087 aaKnown RBP15.7■□□□□ 0.1
CDK5RAP3-229ENST00000583697 SYNJ1O43426 1573 aa15.69■□□□□ 0.1
CDK5RAP3-229ENST00000583697 GRIN2BQ13224 1484 aa15.68■□□□□ 0.1
CDK5RAP3-229ENST00000583697 CLASP1Q7Z460 1538 aa15.66■□□□□ 0.1
CDK5RAP3-229ENST00000583697 ABCA5Q8WWZ7 1642 aa15.65■□□□□ 0.1
CDK5RAP3-229ENST00000583697 SYNJ2O15056 1496 aa15.64■□□□□ 0.09
CDK5RAP3-229ENST00000583697 ARAP1Q96P48 1450 aa15.63■□□□□ 0.09
CDK5RAP3-229ENST00000583697 BIVM-ERCC5R4GMW8 1640 aa15.62■□□□□ 0.09
CDK5RAP3-229ENST00000583697 GAPVD1Q14C86 1478 aa15.62■□□□□ 0.09
CDK5RAP3-229ENST00000583697 ABCA10Q8WWZ4 1543 aa15.62■□□□□ 0.09
CDK5RAP3-229ENST00000583697 CHMP7Q8WUX9 453 aaPredicted RBP15.6■□□□□ 0.09
CDK5RAP3-229ENST00000583697 TOP2BQ02880 1626 aa15.59■□□□□ 0.09
CDK5RAP3-229ENST00000583697 CYB5RLQ6IPT4 315 aa15.58■□□□□ 0.08
CDK5RAP3-229ENST00000583697 ADAMTS12P58397 1594 aa15.55■□□□□ 0.08
CDK5RAP3-229ENST00000583697 WRNQ14191 1432 aaPredicted RBP eCLIP15.55■□□□□ 0.08
CDK5RAP3-229ENST00000583697 GRIN2AQ12879 1464 aa15.5■□□□□ 0.07
CDK5RAP3-229ENST00000583697 ERICH3Q5RHP9 1530 aa15.46■□□□□ 0.07
CDK5RAP3-229ENST00000583697 CEP170Q5SW79 1584 aa15.45■□□□□ 0.06
CDK5RAP3-229ENST00000583697 TRHP20396 242 aaPredicted RBP15.44■□□□□ 0.06
CDK5RAP3-229ENST00000583697 FHAD1B1AJZ9 1412 aa15.43■□□□□ 0.06
CDK5RAP3-229ENST00000583697 NUP160Q12769 1436 aa15.41■□□□□ 0.06
CDK5RAP3-229ENST00000583697 SHROOM2Q13796 1616 aa15.39■□□□□ 0.05
CDK5RAP3-229ENST00000583697 ERCC6L2Q5T890 1561 aa15.37■□□□□ 0.05
CDK5RAP3-229ENST00000583697 RUSC2Q8N2Y8 1516 aa15.34■□□□□ 0.05
CDK5RAP3-229ENST00000583697 CUL7Q14999 1698 aa15.32■□□□□ 0.04
CDK5RAP3-229ENST00000583697 KIF27Q86VH2 1401 aa15.25■□□□□ 0.03
CDK5RAP3-229ENST00000583697 PRG4Q92954 1404 aaPredicted RBP15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 167.9 ms