RNA–Protein interactions for RNA: ENST00000480908.1

RNF7-205, Transcript of ring finger protein 7, humanhuman

TSL 4 BASIC

Gene RNF7, Length 782 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF7-205ENST00000480908 NISCHQ9Y2I1 1504 aa31.03■■■□□ 2.56
RNF7-205ENST00000480908 ABCC9O60706 1549 aa28.29■■■□□ 2.12
RNF7-205ENST00000480908 CCDC180Q9P1Z9 1646 aa27.89■■■□□ 2.05
RNF7-205ENST00000480908 DNAJC5BQ9UF47 199 aa26.78■■□□□ 1.88
RNF7-205ENST00000480908 RB1CC1Q8TDY2 1594 aa26.71■■□□□ 1.87
RNF7-205ENST00000480908 DCAF8L2P0C7V8 631 aa26.58■■□□□ 1.85
RNF7-205ENST00000480908 NACADO15069 1562 aa26.45■■□□□ 1.82
RNF7-205ENST00000480908 PABPN1Q86U42 306 aaKnown RBP eCLIP26.37■■□□□ 1.81
RNF7-205ENST00000480908 UNC13AQ9UPW8 1703 aa26.15■■□□□ 1.78
RNF7-205ENST00000480908 BICRAQ9NZM4 1560 aa25.95■■□□□ 1.75
RNF7-205ENST00000480908 MYO15BQ96JP2 1530 aa25.91■■□□□ 1.74
RNF7-205ENST00000480908 ZCCHC6Q5VYS8 1495 aaKnown RBP25.67■■□□□ 1.7
RNF7-205ENST00000480908 DCAF1Q9Y4B6 1507 aa25.54■■□□□ 1.68
RNF7-205ENST00000480908 SCRIBQ14160 1630 aa25.53■■□□□ 1.68
RNF7-205ENST00000480908 CC2D2AQ9P2K1 1620 aa25.48■■□□□ 1.67
RNF7-205ENST00000480908 CECR2Q9BXF3 1484 aa25.46■■□□□ 1.67
RNF7-205ENST00000480908 SHROOM4Q9ULL8 1493 aa25.43■■□□□ 1.66
RNF7-205ENST00000480908 EIF4G1Q04637 1599 aaKnown RBP25.35■■□□□ 1.65
RNF7-205ENST00000480908 DNAJC5Q9H3Z4 198 aa24.7■■□□□ 1.54
RNF7-205ENST00000480908 NCAPD3P42695 1498 aa24.43■■□□□ 1.5
RNF7-205ENST00000480908 ERCC6Q03468 1493 aa24.43■■□□□ 1.5
RNF7-205ENST00000480908 CUX2O14529 1486 aa24.35■■□□□ 1.49
RNF7-205ENST00000480908 ATAD2BQ9ULI0 1458 aa24.35■■□□□ 1.49
RNF7-205ENST00000480908 SMARCA4P51532 1647 aa24.27■■□□□ 1.48
RNF7-205ENST00000480908 SMARCA2P51531 1590 aa24.25■■□□□ 1.47
RNF7-205ENST00000480908 NESP48681 1621 aa24.23■■□□□ 1.47
RNF7-205ENST00000480908 HMGXB3Q12766 1538 aa24.19■■□□□ 1.46
RNF7-205ENST00000480908 BAZ1BQ9UIG0 1483 aaKnown RBP24.13■■□□□ 1.45
RNF7-205ENST00000480908 BAZ1AQ9NRL2 1556 aaPredicted RBP24.09■■□□□ 1.45
RNF7-205ENST00000480908 MROH2BQ7Z745 1585 aa23.95■■□□□ 1.43
RNF7-205ENST00000480908 PEG3Q9GZU2 1588 aa23.95■■□□□ 1.42
RNF7-205ENST00000480908 THOC2Q8NI27 1593 aaKnown RBP23.93■■□□□ 1.42
RNF7-205ENST00000480908 LAMC3Q9Y6N6 1575 aa23.91■■□□□ 1.42
RNF7-205ENST00000480908 KIF21AQ7Z4S6 1674 aa23.88■■□□□ 1.41
RNF7-205ENST00000480908 PDS5BQ9NTI5 1447 aa23.83■■□□□ 1.4
RNF7-205ENST00000480908 CADPSQ9ULU8 1353 aa23.72■■□□□ 1.39
RNF7-205ENST00000480908 WIZO95785 1651 aa23.69■■□□□ 1.38
RNF7-205ENST00000480908 TRIM41Q8WV44 630 aa23.67■■□□□ 1.38
RNF7-205ENST00000480908 MRC2Q9UBG0 1479 aa23.62■■□□□ 1.37
RNF7-205ENST00000480908 WDR62O43379 1518 aa23.54■■□□□ 1.36
RNF7-205ENST00000480908 CEP164Q9UPV0 1460 aa23.49■■□□□ 1.35
RNF7-205ENST00000480908 FANCD2Q9BXW9 1451 aa23.46■■□□□ 1.35
RNF7-205ENST00000480908 RSF1Q96T23 1441 aaPredicted RBP23.43■■□□□ 1.34
RNF7-205ENST00000480908 CFTRP13569 1480 aa23.36■■□□□ 1.33
RNF7-205ENST00000480908 OSCARQ8IYS5 282 aa23.33■■□□□ 1.33
RNF7-205ENST00000480908 TOP2AP11388 1531 aaKnown RBP23.28■■□□□ 1.32
RNF7-205ENST00000480908 URB2Q14146 1524 aaKnown RBP23.28■■□□□ 1.32
RNF7-205ENST00000480908 PRDM2Q13029 1718 aa23.1■■□□□ 1.29
RNF7-205ENST00000480908 CCDC88BA6NC98 1476 aa23.09■■□□□ 1.29
RNF7-205ENST00000480908 ZNF608Q9ULD9 1512 aaPredicted RBP23.07■■□□□ 1.28
RNF7-205ENST00000480908 IFT140Q96RY7 1462 aa23.01■■□□□ 1.27
RNF7-205ENST00000480908 RIMBP3CA6NJZ7 1639 aa23■■□□□ 1.27
RNF7-205ENST00000480908 RIMBP3BA6NNM3 1639 aa23■■□□□ 1.27
RNF7-205ENST00000480908 RIMBP3Q9UFD9 1639 aa23■■□□□ 1.27
RNF7-205ENST00000480908 TOPBP1Q92547 1522 aa22.98■■□□□ 1.27
RNF7-205ENST00000480908 ARHGEF11O15085 1522 aa22.88■■□□□ 1.25
RNF7-205ENST00000480908 EIF4G3O43432 1585 aaKnown RBP22.88■■□□□ 1.25
RNF7-205ENST00000480908 ABCC8Q09428 1581 aa22.87■■□□□ 1.25
RNF7-205ENST00000480908 FBLN2P98095 1184 aa22.86■■□□□ 1.25
RNF7-205ENST00000480908 CYB5RLQ6IPT4 315 aa22.86■■□□□ 1.25
RNF7-205ENST00000480908 AQRO60306 1485 aaKnown RBP eCLIP22.85■■□□□ 1.252e-6■■■■□ 24.2
RNF7-205ENST00000480908 DNMBPQ6XZF7 1577 aa22.85■■□□□ 1.25
RNF7-205ENST00000480908 CHD1O14646 1710 aa22.79■■□□□ 1.24
RNF7-205ENST00000480908 SUPT5HO00267 1087 aaKnown RBP22.79■■□□□ 1.24
RNF7-205ENST00000480908 TARBP1Q13395 1621 aaKnown RBP22.78■■□□□ 1.24
RNF7-205ENST00000480908 TRHP20396 242 aaPredicted RBP22.73■■□□□ 1.23
RNF7-205ENST00000480908 POLA1P09884 1462 aaPredicted RBP22.73■■□□□ 1.23
RNF7-205ENST00000480908 RAD54L2Q9Y4B4 1467 aa22.72■■□□□ 1.23
RNF7-205ENST00000480908 TDRD9Q8NDG6 1382 aaKnown RBP22.69■■□□□ 1.22
RNF7-205ENST00000480908 SOGA1O94964 1423 aa22.67■■□□□ 1.22
RNF7-205ENST00000480908 ARAP1Q96P48 1450 aa22.64■■□□□ 1.21
RNF7-205ENST00000480908 CHMP7Q8WUX9 453 aaPredicted RBP22.58■■□□□ 1.21
RNF7-205ENST00000480908 FGD5Q6ZNL6 1462 aa22.58■■□□□ 1.2
RNF7-205ENST00000480908 SNAPC4Q5SXM2 1469 aa22.57■■□□□ 1.2
RNF7-205ENST00000480908 CUX1P39880 1505 aa22.51■■□□□ 1.19
RNF7-205ENST00000480908 GRIN2BQ13224 1484 aa22.45■■□□□ 1.18
RNF7-205ENST00000480908 CLASP1Q7Z460 1538 aa22.45■■□□□ 1.18
RNF7-205ENST00000480908 SYNJ1O43426 1573 aa22.45■■□□□ 1.18
RNF7-205ENST00000480908 MAGI1Q96QZ7 1491 aaPredicted RBP22.44■■□□□ 1.18
RNF7-205ENST00000480908 WDR97A6NE52 1622 aa22.42■■□□□ 1.18
RNF7-205ENST00000480908 SYNJ2O15056 1496 aa22.4■■□□□ 1.18
RNF7-205ENST00000480908 PBRM1Q86U86 1689 aa22.36■■□□□ 1.17
RNF7-205ENST00000480908 GAPVD1Q14C86 1478 aa22.36■■□□□ 1.17
RNF7-205ENST00000480908 ABCA10Q8WWZ4 1543 aa22.25■■□□□ 1.15
RNF7-205ENST00000480908 ABCA5Q8WWZ7 1642 aa22.24■■□□□ 1.15
RNF7-205ENST00000480908 AEBP2Q6ZN18 517 aaPredicted RBP22.22■■□□□ 1.15
RNF7-205ENST00000480908 ERCC6L2Q5T890 1561 aa22.17■■□□□ 1.14
RNF7-205ENST00000480908 GRIN2AQ12879 1464 aa22.16■■□□□ 1.14
RNF7-205ENST00000480908 WRNQ14191 1432 aaPredicted RBP eCLIP22.16■■□□□ 1.14
RNF7-205ENST00000480908 TOP2BQ02880 1626 aa22.1■■□□□ 1.13
RNF7-205ENST00000480908 BIVM-ERCC5R4GMW8 1640 aa22.1■■□□□ 1.13
RNF7-205ENST00000480908 CEP170Q5SW79 1584 aa22.1■■□□□ 1.13
RNF7-205ENST00000480908 ADAMTS12P58397 1594 aa22.09■■□□□ 1.13
RNF7-205ENST00000480908 NUP160Q12769 1436 aa22.06■■□□□ 1.12
RNF7-205ENST00000480908 FHAD1B1AJZ9 1412 aa22.04■■□□□ 1.12
RNF7-205ENST00000480908 SHROOM2Q13796 1616 aa21.98■■□□□ 1.11
RNF7-205ENST00000480908 PRG4Q92954 1404 aaPredicted RBP21.96■■□□□ 1.11
RNF7-205ENST00000480908 ERICH3Q5RHP9 1530 aa21.96■■□□□ 1.11
RNF7-205ENST00000480908 JPH4Q96JJ6 628 aa21.94■■□□□ 1.1
RNF7-205ENST00000480908 KIF13AQ9H1H9 1805 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms