RNA–Protein interactions for RNA: ENST00000506963.1

SFXN1-205, Transcript of sideroflexin 1, humanhuman

TSL 3

Gene SFXN1, Length 796 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-205ENST00000506963 NISCHQ9Y2I1 1504 aa23.47■■□□□ 1.35
SFXN1-205ENST00000506963 CCDC180Q9P1Z9 1646 aa20.83■□□□□ 0.93
SFXN1-205ENST00000506963 ABCC9O60706 1549 aa20.09■□□□□ 0.81
SFXN1-205ENST00000506963 ZCCHC6Q5VYS8 1495 aaKnown RBP19.6■□□□□ 0.73
SFXN1-205ENST00000506963 MYO15BQ96JP2 1530 aa19.54■□□□□ 0.72
SFXN1-205ENST00000506963 NACADO15069 1562 aa19.53■□□□□ 0.72
SFXN1-205ENST00000506963 DCAF1Q9Y4B6 1507 aa19.5■□□□□ 0.71
SFXN1-205ENST00000506963 RB1CC1Q8TDY2 1594 aa19.48■□□□□ 0.71
SFXN1-205ENST00000506963 DCAF8L2P0C7V8 631 aa19.36■□□□□ 0.69
SFXN1-205ENST00000506963 UNC13AQ9UPW8 1703 aa19.03■□□□□ 0.64
SFXN1-205ENST00000506963 SCRIBQ14160 1630 aa18.9■□□□□ 0.62
SFXN1-205ENST00000506963 BICRAQ9NZM4 1560 aa18.89■□□□□ 0.62
SFXN1-205ENST00000506963 SHROOM4Q9ULL8 1493 aa18.79■□□□□ 0.6
SFXN1-205ENST00000506963 PABPN1Q86U42 306 aaKnown RBP eCLIP18.77■□□□□ 0.6
SFXN1-205ENST00000506963 EIF4G1Q04637 1599 aaKnown RBP18.36■□□□□ 0.53
SFXN1-205ENST00000506963 DNAJC5BQ9UF47 199 aa18.3■□□□□ 0.52
SFXN1-205ENST00000506963 CC2D2AQ9P2K1 1620 aa18.23■□□□□ 0.51
SFXN1-205ENST00000506963 CECR2Q9BXF3 1484 aa18.22■□□□□ 0.51
SFXN1-205ENST00000506963 BAZ1AQ9NRL2 1556 aaPredicted RBP18.18■□□□□ 0.5
SFXN1-205ENST00000506963 SMARCA4P51532 1647 aa18.16■□□□□ 0.5
SFXN1-205ENST00000506963 MROH2BQ7Z745 1585 aa18.06■□□□□ 0.48
SFXN1-205ENST00000506963 PEG3Q9GZU2 1588 aa18.04■□□□□ 0.48
SFXN1-205ENST00000506963 SMARCA2P51531 1590 aa18.03■□□□□ 0.48
SFXN1-205ENST00000506963 NCAPD3P42695 1498 aa18.02■□□□□ 0.48
SFXN1-205ENST00000506963 ATAD2BQ9ULI0 1458 aa18.02■□□□□ 0.48
SFXN1-205ENST00000506963 HMGXB3Q12766 1538 aa17.95■□□□□ 0.46
SFXN1-205ENST00000506963 RSF1Q96T23 1441 aaPredicted RBP17.93■□□□□ 0.46
SFXN1-205ENST00000506963 BAZ1BQ9UIG0 1483 aaKnown RBP17.86■□□□□ 0.45
SFXN1-205ENST00000506963 WIZO95785 1651 aa17.86■□□□□ 0.45
SFXN1-205ENST00000506963 TOP2AP11388 1531 aaKnown RBP17.72■□□□□ 0.43
SFXN1-205ENST00000506963 LAMC3Q9Y6N6 1575 aa17.5■□□□□ 0.39
SFXN1-205ENST00000506963 SUPT5HO00267 1087 aaKnown RBP17.48■□□□□ 0.39
SFXN1-205ENST00000506963 CCDC88BA6NC98 1476 aa17.48■□□□□ 0.39
SFXN1-205ENST00000506963 CADPSQ9ULU8 1353 aa17.47■□□□□ 0.39
SFXN1-205ENST00000506963 NESP48681 1621 aa17.45■□□□□ 0.38
SFXN1-205ENST00000506963 CFTRP13569 1480 aa17.43■□□□□ 0.38
SFXN1-205ENST00000506963 PDS5BQ9NTI5 1447 aa17.35■□□□□ 0.37
SFXN1-205ENST00000506963 PRDM2Q13029 1718 aa17.31■□□□□ 0.36
SFXN1-205ENST00000506963 ERCC6Q03468 1493 aa17.31■□□□□ 0.36
SFXN1-205ENST00000506963 KIF21AQ7Z4S6 1674 aa17.26■□□□□ 0.35
SFXN1-205ENST00000506963 FANCD2Q9BXW9 1451 aa17.24■□□□□ 0.35
SFXN1-205ENST00000506963 CEP164Q9UPV0 1460 aa17.21■□□□□ 0.35
SFXN1-205ENST00000506963 THOC2Q8NI27 1593 aaKnown RBP17.2■□□□□ 0.34
SFXN1-205ENST00000506963 MRC2Q9UBG0 1479 aa17.17■□□□□ 0.34
SFXN1-205ENST00000506963 CUX2O14529 1486 aa17.14■□□□□ 0.33
SFXN1-205ENST00000506963 WDR62O43379 1518 aa17.13■□□□□ 0.33
SFXN1-205ENST00000506963 URB2Q14146 1524 aaKnown RBP17.07■□□□□ 0.32
SFXN1-205ENST00000506963 ABCC8Q09428 1581 aa17.06■□□□□ 0.32
SFXN1-205ENST00000506963 AEBP2Q6ZN18 517 aaPredicted RBP17.01■□□□□ 0.31
SFXN1-205ENST00000506963 DNMBPQ6XZF7 1577 aa17.01■□□□□ 0.31
SFXN1-205ENST00000506963 TOPBP1Q92547 1522 aa17.01■□□□□ 0.31
SFXN1-205ENST00000506963 CUX1P39880 1505 aa16.93■□□□□ 0.3
SFXN1-205ENST00000506963 WRNQ14191 1432 aaPredicted RBP eCLIP16.89■□□□□ 0.29
SFXN1-205ENST00000506963 POLA1P09884 1462 aaPredicted RBP16.87■□□□□ 0.29
SFXN1-205ENST00000506963 IFT140Q96RY7 1462 aa16.87■□□□□ 0.29
SFXN1-205ENST00000506963 TOP2BQ02880 1626 aa16.86■□□□□ 0.29
SFXN1-205ENST00000506963 BIVM-ERCC5R4GMW8 1640 aa16.86■□□□□ 0.29
SFXN1-205ENST00000506963 FGD5Q6ZNL6 1462 aa16.84■□□□□ 0.29
SFXN1-205ENST00000506963 SYNJ1O43426 1573 aa16.83■□□□□ 0.28
SFXN1-205ENST00000506963 TARBP1Q13395 1621 aaKnown RBP16.82■□□□□ 0.28
SFXN1-205ENST00000506963 SOGA1O94964 1423 aa16.79■□□□□ 0.28
SFXN1-205ENST00000506963 WDR97A6NE52 1622 aa16.76■□□□□ 0.27
SFXN1-205ENST00000506963 RAD54L2Q9Y4B4 1467 aa16.75■□□□□ 0.27
SFXN1-205ENST00000506963 ZNF608Q9ULD9 1512 aaPredicted RBP16.74■□□□□ 0.27
SFXN1-205ENST00000506963 ABCA10Q8WWZ4 1543 aa16.73■□□□□ 0.27
SFXN1-205ENST00000506963 EIF4G3O43432 1585 aaKnown RBP16.69■□□□□ 0.26
SFXN1-205ENST00000506963 AQRO60306 1485 aaKnown RBP eCLIP16.65■□□□□ 0.269e-7■■■■□ 23.8
SFXN1-205ENST00000506963 TDRD9Q8NDG6 1382 aaKnown RBP16.64■□□□□ 0.26
SFXN1-205ENST00000506963 ABCA5Q8WWZ7 1642 aa16.64■□□□□ 0.25
SFXN1-205ENST00000506963 GAPVD1Q14C86 1478 aa16.61■□□□□ 0.25
SFXN1-205ENST00000506963 GRIN2BQ13224 1484 aa16.59■□□□□ 0.25
SFXN1-205ENST00000506963 PBRM1Q86U86 1689 aa16.56■□□□□ 0.24
SFXN1-205ENST00000506963 MAGI1Q96QZ7 1491 aaPredicted RBP16.55■□□□□ 0.24
SFXN1-205ENST00000506963 TRIM41Q8WV44 630 aa16.55■□□□□ 0.24
SFXN1-205ENST00000506963 ERICH3Q5RHP9 1530 aa16.53■□□□□ 0.24
SFXN1-205ENST00000506963 KIF27Q86VH2 1401 aa16.53■□□□□ 0.24
SFXN1-205ENST00000506963 SNAPC4Q5SXM2 1469 aa16.51■□□□□ 0.23
SFXN1-205ENST00000506963 CHIC1Q5VXU3 224 aa16.49■□□□□ 0.23
SFXN1-205ENST00000506963 SYNJ2O15056 1496 aa16.48■□□□□ 0.23
SFXN1-205ENST00000506963 ADAMTS12P58397 1594 aa16.46■□□□□ 0.23
SFXN1-205ENST00000506963 IGF1RP08069 1367 aa16.44■□□□□ 0.22
SFXN1-205ENST00000506963 CHD1O14646 1710 aa16.44■□□□□ 0.22
SFXN1-205ENST00000506963 FHAD1B1AJZ9 1412 aa16.44■□□□□ 0.22
SFXN1-205ENST00000506963 OSCARQ8IYS5 282 aa16.41■□□□□ 0.22
SFXN1-205ENST00000506963 CUL7Q14999 1698 aa16.4■□□□□ 0.22
SFXN1-205ENST00000506963 CHMP7Q8WUX9 453 aaPredicted RBP16.39■□□□□ 0.21
SFXN1-205ENST00000506963 RUSC2Q8N2Y8 1516 aa16.39■□□□□ 0.21
SFXN1-205ENST00000506963 GRIN2AQ12879 1464 aa16.38■□□□□ 0.21
SFXN1-205ENST00000506963 DNAJC5Q9H3Z4 198 aa16.38■□□□□ 0.21
SFXN1-205ENST00000506963 EEA1Q15075 1411 aa16.36■□□□□ 0.21
SFXN1-205ENST00000506963 FBLN2P98095 1184 aa16.35■□□□□ 0.21
SFXN1-205ENST00000506963 CARMIL1Q5VZK9 1371 aa16.33■□□□□ 0.2
SFXN1-205ENST00000506963 NUP160Q12769 1436 aa16.33■□□□□ 0.2
SFXN1-205ENST00000506963 CLASP1Q7Z460 1538 aa16.31■□□□□ 0.2
SFXN1-205ENST00000506963 PRXQ9BXM0 1461 aa16.29■□□□□ 0.2
SFXN1-205ENST00000506963 CEP170Q5SW79 1584 aa16.28■□□□□ 0.2
SFXN1-205ENST00000506963 RAPGEF2Q9Y4G8 1499 aa16.27■□□□□ 0.19
SFXN1-205ENST00000506963 CSRNP3Q8WYN3 585 aa16.26■□□□□ 0.19
SFXN1-205ENST00000506963 KIAA0586Q9BVV6 1533 aa16.2■□□□□ 0.18
SFXN1-205ENST00000506963 SHROOM2Q13796 1616 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms