RNA–Protein interactions for RNA: ENST00000430215.7

GGCX-205, Transcript of gamma-glutamyl carboxylase, humanhuman

TSL 2 BASIC

Gene GGCX, Length 2,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGCX-205ENST00000430215 NISCHQ9Y2I1 1504 aa23.28■■□□□ 1.32
GGCX-205ENST00000430215 CCDC180Q9P1Z9 1646 aa20.49■□□□□ 0.87
GGCX-205ENST00000430215 ABCC9O60706 1549 aa19.86■□□□□ 0.77
GGCX-205ENST00000430215 ZCCHC6Q5VYS8 1495 aaKnown RBP19.45■□□□□ 0.7
GGCX-205ENST00000430215 DCAF8L2P0C7V8 631 aa19.34■□□□□ 0.69
GGCX-205ENST00000430215 DCAF1Q9Y4B6 1507 aa19.24■□□□□ 0.67
GGCX-205ENST00000430215 NACADO15069 1562 aa19.21■□□□□ 0.67
GGCX-205ENST00000430215 MYO15BQ96JP2 1530 aa19.2■□□□□ 0.66
GGCX-205ENST00000430215 RB1CC1Q8TDY2 1594 aa19.16■□□□□ 0.66
GGCX-205ENST00000430215 SCRIBQ14160 1630 aa18.79■□□□□ 0.6
GGCX-205ENST00000430215 UNC13AQ9UPW8 1703 aa18.78■□□□□ 0.6
GGCX-205ENST00000430215 BICRAQ9NZM4 1560 aa18.65■□□□□ 0.58
GGCX-205ENST00000430215 PABPN1Q86U42 306 aaKnown RBP eCLIP18.65■□□□□ 0.58
GGCX-205ENST00000430215 SHROOM4Q9ULL8 1493 aa18.62■□□□□ 0.57
GGCX-205ENST00000430215 CECR2Q9BXF3 1484 aa18.16■□□□□ 0.5
GGCX-205ENST00000430215 EIF4G1Q04637 1599 aaKnown RBP18.1■□□□□ 0.49
GGCX-205ENST00000430215 DNAJC5BQ9UF47 199 aa18.05■□□□□ 0.48
GGCX-205ENST00000430215 SMARCA4P51532 1647 aa17.99■□□□□ 0.47
GGCX-205ENST00000430215 MROH2BQ7Z745 1585 aa17.98■□□□□ 0.47
GGCX-205ENST00000430215 BAZ1AQ9NRL2 1556 aaPredicted RBP17.98■□□□□ 0.47
GGCX-205ENST00000430215 CC2D2AQ9P2K1 1620 aa17.96■□□□□ 0.46
GGCX-205ENST00000430215 RSF1Q96T23 1441 aaPredicted RBP17.88■□□□□ 0.45
GGCX-205ENST00000430215 ATAD2BQ9ULI0 1458 aa17.84■□□□□ 0.45
GGCX-205ENST00000430215 PEG3Q9GZU2 1588 aa17.8■□□□□ 0.44
GGCX-205ENST00000430215 SUPT5HO00267 1087 aaKnown RBP17.8■□□□□ 0.44
GGCX-205ENST00000430215 WIZO95785 1651 aa17.79■□□□□ 0.44
GGCX-205ENST00000430215 SMARCA2P51531 1590 aa17.77■□□□□ 0.44
GGCX-205ENST00000430215 NCAPD3P42695 1498 aa17.77■□□□□ 0.43
GGCX-205ENST00000430215 HMGXB3Q12766 1538 aa17.67■□□□□ 0.42
GGCX-205ENST00000430215 BAZ1BQ9UIG0 1483 aaKnown RBP17.67■□□□□ 0.42
GGCX-205ENST00000430215 TOP2AP11388 1531 aaKnown RBP17.58■□□□□ 0.4
GGCX-205ENST00000430215 SLC24A1O60721 1099 aa17.52■□□□□ 0.4
GGCX-205ENST00000430215 CCDC88BA6NC98 1476 aa17.42■□□□□ 0.38
GGCX-205ENST00000430215 NESP48681 1621 aa17.3■□□□□ 0.36
GGCX-205ENST00000430215 CADPSQ9ULU8 1353 aa17.27■□□□□ 0.36
GGCX-205ENST00000430215 CFTRP13569 1480 aa17.24■□□□□ 0.35
GGCX-205ENST00000430215 LAMC3Q9Y6N6 1575 aa17.21■□□□□ 0.35
GGCX-205ENST00000430215 PDS5BQ9NTI5 1447 aa17.08■□□□□ 0.33
GGCX-205ENST00000430215 FANCD2Q9BXW9 1451 aa17.07■□□□□ 0.32
GGCX-205ENST00000430215 KIF21AQ7Z4S6 1674 aa17.05■□□□□ 0.32
GGCX-205ENST00000430215 PRDM2Q13029 1718 aa17.05■□□□□ 0.32
GGCX-205ENST00000430215 ERCC6Q03468 1493 aa17.03■□□□□ 0.32
GGCX-205ENST00000430215 CHIC1Q5VXU3 224 aa16.99■□□□□ 0.31
GGCX-205ENST00000430215 CEP164Q9UPV0 1460 aa16.99■□□□□ 0.31
GGCX-205ENST00000430215 THOC2Q8NI27 1593 aaKnown RBP16.92■□□□□ 0.3
GGCX-205ENST00000430215 URB2Q14146 1524 aaKnown RBP16.91■□□□□ 0.3
GGCX-205ENST00000430215 MRC2Q9UBG0 1479 aa16.91■□□□□ 0.3
GGCX-205ENST00000430215 ABCC8Q09428 1581 aa16.88■□□□□ 0.29
GGCX-205ENST00000430215 WDR62O43379 1518 aa16.85■□□□□ 0.29
GGCX-205ENST00000430215 CUX1P39880 1505 aa16.84■□□□□ 0.29
GGCX-205ENST00000430215 TOPBP1Q92547 1522 aa16.83■□□□□ 0.28
GGCX-205ENST00000430215 WRNQ14191 1432 aaPredicted RBP eCLIP16.81■□□□□ 0.28
GGCX-205ENST00000430215 DNMBPQ6XZF7 1577 aa16.81■□□□□ 0.28
GGCX-205ENST00000430215 SYNJ1O43426 1573 aa16.79■□□□□ 0.28
GGCX-205ENST00000430215 CUX2O14529 1486 aa16.74■□□□□ 0.27
GGCX-205ENST00000430215 TOP2BQ02880 1626 aa16.74■□□□□ 0.27
GGCX-205ENST00000430215 BIVM-ERCC5R4GMW8 1640 aa16.72■□□□□ 0.27
GGCX-205ENST00000430215 POLA1P09884 1462 aaPredicted RBP16.72■□□□□ 0.27
GGCX-205ENST00000430215 FGD5Q6ZNL6 1462 aa16.71■□□□□ 0.27
GGCX-205ENST00000430215 RAD54L2Q9Y4B4 1467 aa16.67■□□□□ 0.26
GGCX-205ENST00000430215 TRIM41Q8WV44 630 aa16.65■□□□□ 0.26
GGCX-205ENST00000430215 SOGA1O94964 1423 aa16.64■□□□□ 0.25
GGCX-205ENST00000430215 TARBP1Q13395 1621 aaKnown RBP16.63■□□□□ 0.25
GGCX-205ENST00000430215 IFT140Q96RY7 1462 aa16.62■□□□□ 0.25
GGCX-205ENST00000430215 ZNF608Q9ULD9 1512 aaPredicted RBP16.59■□□□□ 0.25
GGCX-205ENST00000430215 ABCA10Q8WWZ4 1543 aa16.56■□□□□ 0.24
GGCX-205ENST00000430215 TDRD9Q8NDG6 1382 aaKnown RBP16.55■□□□□ 0.24
GGCX-205ENST00000430215 WDR97A6NE52 1622 aa16.54■□□□□ 0.24
GGCX-205ENST00000430215 AQRO60306 1485 aaKnown RBP eCLIP16.53■□□□□ 0.243e-9■■■■■ 34.1
GGCX-205ENST00000430215 EIF4G3O43432 1585 aaKnown RBP16.49■□□□□ 0.23
GGCX-205ENST00000430215 RUSC2Q8N2Y8 1516 aa16.46■□□□□ 0.23
GGCX-205ENST00000430215 ABCA5Q8WWZ7 1642 aa16.46■□□□□ 0.23
GGCX-205ENST00000430215 FAM9AQ8IZU1 332 aaPredicted RBP16.46■□□□□ 0.23
GGCX-205ENST00000430215 GAPVD1Q14C86 1478 aa16.45■□□□□ 0.22
GGCX-205ENST00000430215 LOC105371045A0A1W2PR82 267 aa16.42■□□□□ 0.22
GGCX-205ENST00000430215 KIF27Q86VH2 1401 aa16.41■□□□□ 0.22
GGCX-205ENST00000430215 GRIN2BQ13224 1484 aa16.39■□□□□ 0.21
GGCX-205ENST00000430215 IGF1RP08069 1367 aa16.37■□□□□ 0.21
GGCX-205ENST00000430215 PBRM1Q86U86 1689 aa16.37■□□□□ 0.21
GGCX-205ENST00000430215 SNAPC4Q5SXM2 1469 aa16.35■□□□□ 0.21
GGCX-205ENST00000430215 MYT1Q01538 1121 aa16.35■□□□□ 0.21
GGCX-205ENST00000430215 ERICH3Q5RHP9 1530 aa16.34■□□□□ 0.21
GGCX-205ENST00000430215 MAGI1Q96QZ7 1491 aaPredicted RBP16.3■□□□□ 0.2
GGCX-205ENST00000430215 EHMT2Q96KQ7 1210 aa16.3■□□□□ 0.2
GGCX-205ENST00000430215 ADAMTS12P58397 1594 aa16.27■□□□□ 0.2
GGCX-205ENST00000430215 CSRNP3Q8WYN3 585 aa16.27■□□□□ 0.2
GGCX-205ENST00000430215 EEA1Q15075 1411 aa16.27■□□□□ 0.19
GGCX-205ENST00000430215 FHAD1B1AJZ9 1412 aa16.26■□□□□ 0.19
GGCX-205ENST00000430215 SYNJ2O15056 1496 aa16.25■□□□□ 0.19
GGCX-205ENST00000430215 CARMIL1Q5VZK9 1371 aa16.25■□□□□ 0.19
GGCX-205ENST00000430215 FBLN2P98095 1184 aa16.24■□□□□ 0.19
GGCX-205ENST00000430215 CHMP7Q8WUX9 453 aaPredicted RBP16.23■□□□□ 0.19
GGCX-205ENST00000430215 CUL7Q14999 1698 aa16.22■□□□□ 0.19
GGCX-205ENST00000430215 PRXQ9BXM0 1461 aa16.22■□□□□ 0.19
GGCX-205ENST00000430215 CHD1O14646 1710 aa16.21■□□□□ 0.19
GGCX-205ENST00000430215 GRIN2AQ12879 1464 aa16.2■□□□□ 0.18
GGCX-205ENST00000430215 TTBK1Q5TCY1 1321 aaPredicted RBP16.19■□□□□ 0.18
GGCX-205ENST00000430215 DAXXQ9UER7 740 aaPredicted RBP16.17■□□□□ 0.18
GGCX-205ENST00000430215 RAPGEF2Q9Y4G8 1499 aa16.17■□□□□ 0.18
GGCX-205ENST00000430215 PELP1Q8IZL8 1130 aaKnown RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms