RNA–Protein interactions for RNA: ENST00000532334.1

CTTN-214, Transcript of cortactin, humanhuman

TSL 2

Gene CTTN, Length 481 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-214ENST00000532334 NISCHQ9Y2I1 1504 aa16.75■□□□□ 0.27
CTTN-214ENST00000532334 CCDC180Q9P1Z9 1646 aa14.83□□□□□ -0.04
CTTN-214ENST00000532334 ABCC9O60706 1549 aa14.39□□□□□ -0.11
CTTN-214ENST00000532334 ZCCHC6Q5VYS8 1495 aaKnown RBP13.98□□□□□ -0.17
CTTN-214ENST00000532334 MYO15BQ96JP2 1530 aa13.95□□□□□ -0.18
CTTN-214ENST00000532334 NACADO15069 1562 aa13.95□□□□□ -0.18
CTTN-214ENST00000532334 RB1CC1Q8TDY2 1594 aa13.92□□□□□ -0.18
CTTN-214ENST00000532334 DCAF1Q9Y4B6 1507 aa13.91□□□□□ -0.18
CTTN-214ENST00000532334 DCAF8L2P0C7V8 631 aa13.88□□□□□ -0.19
CTTN-214ENST00000532334 UNC13AQ9UPW8 1703 aa13.55□□□□□ -0.24
CTTN-214ENST00000532334 BICRAQ9NZM4 1560 aa13.51□□□□□ -0.25
CTTN-214ENST00000532334 SCRIBQ14160 1630 aa13.48□□□□□ -0.25
CTTN-214ENST00000532334 PABPN1Q86U42 306 aaKnown RBP eCLIP13.47□□□□□ -0.25
CTTN-214ENST00000532334 SHROOM4Q9ULL8 1493 aa13.42□□□□□ -0.26
CTTN-214ENST00000532334 DNAJC5BQ9UF47 199 aa13.19□□□□□ -0.3
CTTN-214ENST00000532334 EIF4G1Q04637 1599 aaKnown RBP13.13□□□□□ -0.31
CTTN-214ENST00000532334 CC2D2AQ9P2K1 1620 aa13.03□□□□□ -0.32
CTTN-214ENST00000532334 CECR2Q9BXF3 1484 aa13.03□□□□□ -0.32
CTTN-214ENST00000532334 BAZ1AQ9NRL2 1556 aaPredicted RBP12.96□□□□□ -0.33
CTTN-214ENST00000532334 SMARCA4P51532 1647 aa12.95□□□□□ -0.34
CTTN-214ENST00000532334 NCAPD3P42695 1498 aa12.91□□□□□ -0.34
CTTN-214ENST00000532334 MROH2BQ7Z745 1585 aa12.9□□□□□ -0.35
CTTN-214ENST00000532334 ATAD2BQ9ULI0 1458 aa12.89□□□□□ -0.35
CTTN-214ENST00000532334 PEG3Q9GZU2 1588 aa12.88□□□□□ -0.35
CTTN-214ENST00000532334 SMARCA2P51531 1590 aa12.86□□□□□ -0.35
CTTN-214ENST00000532334 HMGXB3Q12766 1538 aa12.82□□□□□ -0.36
CTTN-214ENST00000532334 RSF1Q96T23 1441 aaPredicted RBP12.8□□□□□ -0.36
CTTN-214ENST00000532334 BAZ1BQ9UIG0 1483 aaKnown RBP12.75□□□□□ -0.37
CTTN-214ENST00000532334 WIZO95785 1651 aa12.73□□□□□ -0.37
CTTN-214ENST00000532334 TOP2AP11388 1531 aaKnown RBP12.62□□□□□ -0.39
CTTN-214ENST00000532334 CADPSQ9ULU8 1353 aa12.51□□□□□ -0.41
CTTN-214ENST00000532334 LAMC3Q9Y6N6 1575 aa12.5□□□□□ -0.41
CTTN-214ENST00000532334 NESP48681 1621 aa12.49□□□□□ -0.41
CTTN-214ENST00000532334 CCDC88BA6NC98 1476 aa12.49□□□□□ -0.41
CTTN-214ENST00000532334 SUPT5HO00267 1087 aaKnown RBP12.47□□□□□ -0.41
CTTN-214ENST00000532334 CFTRP13569 1480 aa12.46□□□□□ -0.41
CTTN-214ENST00000532334 PDS5BQ9NTI5 1447 aa12.42□□□□□ -0.42
CTTN-214ENST00000532334 ERCC6Q03468 1493 aa12.39□□□□□ -0.43
CTTN-214ENST00000532334 FANCD2Q9BXW9 1451 aa12.34□□□□□ -0.43
CTTN-214ENST00000532334 KIF21AQ7Z4S6 1674 aa12.31□□□□□ -0.44
CTTN-214ENST00000532334 CEP164Q9UPV0 1460 aa12.3□□□□□ -0.44
CTTN-214ENST00000532334 THOC2Q8NI27 1593 aaKnown RBP12.29□□□□□ -0.44
CTTN-214ENST00000532334 PRDM2Q13029 1718 aa12.28□□□□□ -0.44
CTTN-214ENST00000532334 CUX2O14529 1486 aa12.28□□□□□ -0.44
CTTN-214ENST00000532334 MRC2Q9UBG0 1479 aa12.27□□□□□ -0.45
CTTN-214ENST00000532334 WDR62O43379 1518 aa12.24□□□□□ -0.45
CTTN-214ENST00000532334 URB2Q14146 1524 aaKnown RBP12.21□□□□□ -0.46
CTTN-214ENST00000532334 ABCC8Q09428 1581 aa12.18□□□□□ -0.46
CTTN-214ENST00000532334 TOPBP1Q92547 1522 aa12.15□□□□□ -0.46
CTTN-214ENST00000532334 DNMBPQ6XZF7 1577 aa12.13□□□□□ -0.47
CTTN-214ENST00000532334 CHIC1Q5VXU3 224 aa12.11□□□□□ -0.47
CTTN-214ENST00000532334 CUX1P39880 1505 aa12.09□□□□□ -0.47
CTTN-214ENST00000532334 POLA1P09884 1462 aaPredicted RBP12.06□□□□□ -0.48
CTTN-214ENST00000532334 IFT140Q96RY7 1462 aa12.06□□□□□ -0.48
CTTN-214ENST00000532334 WRNQ14191 1432 aaPredicted RBP eCLIP12.04□□□□□ -0.48
CTTN-214ENST00000532334 FGD5Q6ZNL6 1462 aa12.02□□□□□ -0.48
CTTN-214ENST00000532334 TARBP1Q13395 1621 aaKnown RBP12.02□□□□□ -0.49
CTTN-214ENST00000532334 SOGA1O94964 1423 aa12.02□□□□□ -0.49
CTTN-214ENST00000532334 TOP2BQ02880 1626 aa12.01□□□□□ -0.49
CTTN-214ENST00000532334 BIVM-ERCC5R4GMW8 1640 aa12□□□□□ -0.49
CTTN-214ENST00000532334 SYNJ1O43426 1573 aa11.99□□□□□ -0.49
CTTN-214ENST00000532334 ZNF608Q9ULD9 1512 aaPredicted RBP11.98□□□□□ -0.49
CTTN-214ENST00000532334 RAD54L2Q9Y4B4 1467 aa11.98□□□□□ -0.49
CTTN-214ENST00000532334 ABCA10Q8WWZ4 1543 aa11.95□□□□□ -0.5
CTTN-214ENST00000532334 WDR97A6NE52 1622 aa11.94□□□□□ -0.5
CTTN-214ENST00000532334 AQRO60306 1485 aaKnown RBP eCLIP11.93□□□□□ -0.54e-8■■□□□ 13.7
CTTN-214ENST00000532334 TDRD9Q8NDG6 1382 aaKnown RBP11.92□□□□□ -0.5
CTTN-214ENST00000532334 EIF4G3O43432 1585 aaKnown RBP11.91□□□□□ -0.5
CTTN-214ENST00000532334 GAPVD1Q14C86 1478 aa11.87□□□□□ -0.51
CTTN-214ENST00000532334 ABCA5Q8WWZ7 1642 aa11.86□□□□□ -0.51
CTTN-214ENST00000532334 GRIN2BQ13224 1484 aa11.86□□□□□ -0.51
CTTN-214ENST00000532334 MAGI1Q96QZ7 1491 aaPredicted RBP11.83□□□□□ -0.52
CTTN-214ENST00000532334 DNAJC5Q9H3Z4 198 aa11.82□□□□□ -0.52
CTTN-214ENST00000532334 TRIM41Q8WV44 630 aa11.81□□□□□ -0.52
CTTN-214ENST00000532334 SNAPC4Q5SXM2 1469 aa11.8□□□□□ -0.52
CTTN-214ENST00000532334 ERICH3Q5RHP9 1530 aa11.8□□□□□ -0.52
CTTN-214ENST00000532334 KIF27Q86VH2 1401 aa11.79□□□□□ -0.52
CTTN-214ENST00000532334 OSCARQ8IYS5 282 aa11.79□□□□□ -0.52
CTTN-214ENST00000532334 PBRM1Q86U86 1689 aa11.78□□□□□ -0.52
CTTN-214ENST00000532334 SYNJ2O15056 1496 aa11.77□□□□□ -0.52
CTTN-214ENST00000532334 IGF1RP08069 1367 aa11.77□□□□□ -0.53
CTTN-214ENST00000532334 FHAD1B1AJZ9 1412 aa11.75□□□□□ -0.53
CTTN-214ENST00000532334 CHMP7Q8WUX9 453 aaPredicted RBP11.74□□□□□ -0.53
CTTN-214ENST00000532334 ADAMTS12P58397 1594 aa11.72□□□□□ -0.53
CTTN-214ENST00000532334 FBLN2P98095 1184 aa11.72□□□□□ -0.53
CTTN-214ENST00000532334 CHD1O14646 1710 aa11.71□□□□□ -0.54
CTTN-214ENST00000532334 RUSC2Q8N2Y8 1516 aa11.7□□□□□ -0.54
CTTN-214ENST00000532334 GRIN2AQ12879 1464 aa11.7□□□□□ -0.54
CTTN-214ENST00000532334 NUP160Q12769 1436 aa11.68□□□□□ -0.54
CTTN-214ENST00000532334 CARMIL1Q5VZK9 1371 aa11.67□□□□□ -0.54
CTTN-214ENST00000532334 CUL7Q14999 1698 aa11.67□□□□□ -0.54
CTTN-214ENST00000532334 CLASP1Q7Z460 1538 aa11.65□□□□□ -0.54
CTTN-214ENST00000532334 EEA1Q15075 1411 aa11.64□□□□□ -0.55
CTTN-214ENST00000532334 AEBP2Q6ZN18 517 aaPredicted RBP11.63□□□□□ -0.55
CTTN-214ENST00000532334 CEP170Q5SW79 1584 aa11.62□□□□□ -0.55
CTTN-214ENST00000532334 PRXQ9BXM0 1461 aa11.62□□□□□ -0.55
CTTN-214ENST00000532334 CSRNP3Q8WYN3 585 aa11.61□□□□□ -0.55
CTTN-214ENST00000532334 RAPGEF2Q9Y4G8 1499 aa11.61□□□□□ -0.55
CTTN-214ENST00000532334 KIAA0586Q9BVV6 1533 aa11.58□□□□□ -0.56
CTTN-214ENST00000532334 ARHGEF11O15085 1522 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms