RNA–Protein interactions for RNA: ENST00000484179.5

USP34-215, Transcript of ubiquitin specific peptidase 34, humanhuman

TSL 3

Gene USP34, Length 927 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP34-215ENST00000484179 AEBP2Q6ZN18 517 aaPredicted RBP25.87■■□□□ 1.73
USP34-215ENST00000484179 CHIC1Q5VXU3 224 aa24.43■■□□□ 1.5
USP34-215ENST00000484179 SENP3Q9H4L4 574 aaPredicted RBP22.1■■□□□ 1.13
USP34-215ENST00000484179 PHF23Q9BUL5 403 aaPredicted RBP21.77■■□□□ 1.08
USP34-215ENST00000484179 FOXD1Q16676 465 aa20.71■□□□□ 0.91
USP34-215ENST00000484179 POTEDQ86YR6 584 aa20.08■□□□□ 0.81
USP34-215ENST00000484179 PLPPR3Q6T4P5 718 aa19.57■□□□□ 0.72
USP34-215ENST00000484179 MSH5O43196 834 aa19.55■□□□□ 0.72
USP34-215ENST00000484179 PIAS4Q8N2W9 510 aaPredicted RBP19.17■□□□□ 0.66
USP34-215ENST00000484179 PPP6R1Q9UPN7 881 aa19.08■□□□□ 0.64
USP34-215ENST00000484179 ADRA2BP18089 450 aa19.02■□□□□ 0.64
USP34-215ENST00000484179 MAPK8IP2Q13387 824 aaPredicted RBP17.48■□□□□ 0.39
USP34-215ENST00000484179 SCAF1Q9H7N4 1312 aaKnown RBP17.47■□□□□ 0.39
USP34-215ENST00000484179 DMRT2Q9Y5R5 561 aa17.45■□□□□ 0.38
USP34-215ENST00000484179 PPP4R3CPQ6ZMV5 832 aa17.15■□□□□ 0.34
USP34-215ENST00000484179 CACNB1Q02641 598 aaPredicted RBP17.12■□□□□ 0.33
USP34-215ENST00000484179 CNKSR2Q8WXI2 1034 aa16.82■□□□□ 0.28
USP34-215ENST00000484179 HOXD11P31277 338 aaPredicted RBP16.75■□□□□ 0.27
USP34-215ENST00000484179 DCAF8L1A6NGE4 600 aa16.71■□□□□ 0.27
USP34-215ENST00000484179 RNF39Q9H2S5 420 aa16.67■□□□□ 0.26
USP34-215ENST00000484179 RNF216Q9NWF9 866 aaPredicted RBP16.66■□□□□ 0.26
USP34-215ENST00000484179 NCBP3Q53F19 620 aaKnown RBP16.54■□□□□ 0.24
USP34-215ENST00000484179 C1QBPQ07021 282 aaKnown RBP16.37■□□□□ 0.21
USP34-215ENST00000484179 NPM3O75607 178 aaKnown RBP16.27■□□□□ 0.2
USP34-215ENST00000484179 DNAJC5BQ9UF47 199 aa16.21■□□□□ 0.19
USP34-215ENST00000484179 KCNA4P22459 653 aa16.01■□□□□ 0.15
USP34-215ENST00000484179 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.95■□□□□ 0.14
USP34-215ENST00000484179 POTEHQ6S545 545 aa15.61■□□□□ 0.09
USP34-215ENST00000484179 U3KPZ7 1027 aaPredicted RBP15.61■□□□□ 0.09
USP34-215ENST00000484179 SLC4A2P04920 1241 aa15.51■□□□□ 0.07
USP34-215ENST00000484179 DSG3P32926 999 aa15.41■□□□□ 0.06
USP34-215ENST00000484179 SPINK5Q9NQ38 1064 aaPredicted RBP15.37■□□□□ 0.05
USP34-215ENST00000484179 CAPN15O75808 1086 aa15.33■□□□□ 0.04
USP34-215ENST00000484179 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.24■□□□□ 0.03
USP34-215ENST00000484179 APLP2Q06481 763 aa15.24■□□□□ 0.03
USP34-215ENST00000484179 HNRNPUL2Q1KMD3 747 aaKnown RBP15.24■□□□□ 0.03
USP34-215ENST00000484179 SAMD1Q6SPF0 538 aaPredicted RBP15.15■□□□□ 0.02
USP34-215ENST00000484179 SLC4A1APQ9BWU0 796 aaKnown RBP15.14■□□□□ 0.01
USP34-215ENST00000484179 ZNF219Q9P2Y4 722 aaPredicted RBP15.11■□□□□ 0.01
USP34-215ENST00000484179 TRHP20396 242 aaPredicted RBP15.1■□□□□ 0.01
USP34-215ENST00000484179 MYCNP04198 464 aaPredicted RBP15.06■□□□□ 0
USP34-215ENST00000484179 ABCB7O75027 752 aa14.96□□□□□ -0.01
USP34-215ENST00000484179 FOXD4L1Q9NU39 408 aa14.94□□□□□ -0.02
USP34-215ENST00000484179 POLA2Q14181 598 aa14.72□□□□□ -0.05
USP34-215ENST00000484179 ZBTB22O15209 634 aa14.71□□□□□ -0.05
USP34-215ENST00000484179 RBM42Q9BTD8 480 aaKnown RBP14.68□□□□□ -0.06
USP34-215ENST00000484179 ATF5Q9Y2D1 282 aaPredicted RBP14.67□□□□□ -0.06
USP34-215ENST00000484179 CHRDL2Q6WN34 429 aa14.6□□□□□ -0.07
USP34-215ENST00000484179 ATXN8OSP0DMR3 200 aa14.51□□□□□ -0.09
USP34-215ENST00000484179 ZBTB12Q9Y330 459 aaPredicted RBP14.47□□□□□ -0.09
USP34-215ENST00000484179 SP7Q8TDD2 431 aaPredicted RBP14.36□□□□□ -0.11
USP34-215ENST00000484179 OSCARQ8IYS5 282 aa14.24□□□□□ -0.13
USP34-215ENST00000484179 AKT1S1Q96B36 256 aa14.24□□□□□ -0.13
USP34-215ENST00000484179 PIP4P2Q8N4L2 257 aa14.15□□□□□ -0.14
USP34-215ENST00000484179 FBLN2P98095 1184 aa14.14□□□□□ -0.15
USP34-215ENST00000484179 REM2Q8IYK8 340 aaPredicted RBP14.13□□□□□ -0.15
USP34-215ENST00000484179 CSRNP3Q8WYN3 585 aa14.12□□□□□ -0.15
USP34-215ENST00000484179 SPDYE2BA6NHP3 402 aa14.02□□□□□ -0.17
USP34-215ENST00000484179 HAX1O00165 279 aa14.02□□□□□ -0.17
USP34-215ENST00000484179 SPDYE6P0CI01 402 aa14.02□□□□□ -0.17
USP34-215ENST00000484179 SPDYE2Q495Y8 402 aa14.02□□□□□ -0.17
USP34-215ENST00000484179 MKRN4PQ13434 485 aaPredicted RBP14.01□□□□□ -0.17
USP34-215ENST00000484179 FXR2P51116 673 aaKnown RBP eCLIP13.99□□□□□ -0.172e-7■■■■□ 20.4
USP34-215ENST00000484179 PITPNM1O00562 1244 aa13.97□□□□□ -0.17
USP34-215ENST00000484179 EHMT2Q96KQ7 1210 aa13.95□□□□□ -0.18
USP34-215ENST00000484179 EVX2Q03828 476 aa13.87□□□□□ -0.19
USP34-215ENST00000484179 ZNF692Q9BU19 519 aaPredicted RBP13.85□□□□□ -0.19
USP34-215ENST00000484179 SSUH2Q9Y2M2 353 aa13.83□□□□□ -0.2
USP34-215ENST00000484179 SPDYE1Q8NFV5 336 aaPredicted RBP13.75□□□□□ -0.21
USP34-215ENST00000484179 CLEC11AQ9Y240 323 aa13.69□□□□□ -0.22
USP34-215ENST00000484179 PABPN1Q86U42 306 aaKnown RBP eCLIP13.64□□□□□ -0.23
USP34-215ENST00000484179 PRKAR2AP13861 404 aaKnown RBP13.59□□□□□ -0.23
USP34-215ENST00000484179 C19orf67A6NJJ6 358 aa13.55□□□□□ -0.24
USP34-215ENST00000484179 PRR29P0C7W0 189 aa13.5□□□□□ -0.25
USP34-215ENST00000484179 GABBR2O75899 941 aa13.49□□□□□ -0.25
USP34-215ENST00000484179 LHX8Q68G74 356 aa13.47□□□□□ -0.25
USP34-215ENST00000484179 SPDYE4A6NLX3 237 aa13.41□□□□□ -0.26
USP34-215ENST00000484179 CHADLQ6NUI6 762 aa13.41□□□□□ -0.26
USP34-215ENST00000484179 STAG3Q9UJ98 1225 aa13.32□□□□□ -0.28
USP34-215ENST00000484179 FARP1Q9Y4F1 1045 aaPredicted RBP13.26□□□□□ -0.29
USP34-215ENST00000484179 POTEIP0CG38 1075 aa13.23□□□□□ -0.29
USP34-215ENST00000484179 CREBZFQ9NS37 354 aa13.18□□□□□ -0.3
USP34-215ENST00000484179 CD44P16070 742 aaKnown RBP13.15□□□□□ -0.3
USP34-215ENST00000484179 PROM2Q8N271 834 aa13.11□□□□□ -0.31
USP34-215ENST00000484179 CLCN6P51797 869 aa13.06□□□□□ -0.32
USP34-215ENST00000484179 PLSCR2Q9NRY7 297 aa13.03□□□□□ -0.32
USP34-215ENST00000484179 NPM1P06748 294 aaKnown RBP eCLIP12.97□□□□□ -0.33
USP34-215ENST00000484179 ZNF579Q8NAF0 562 aaKnown RBP12.97□□□□□ -0.33
USP34-215ENST00000484179 DCBLD2Q96PD2 775 aa12.97□□□□□ -0.33
USP34-215ENST00000484179 ZRANB1Q9UGI0 708 aa12.97□□□□□ -0.33
USP34-215ENST00000484179 MNX1P50219 401 aaPredicted RBP12.96□□□□□ -0.33
USP34-215ENST00000484179 PAK3O75914 559 aaPredicted RBP12.9□□□□□ -0.34
USP34-215ENST00000484179 OTUD5Q96G74 571 aa12.84□□□□□ -0.35
USP34-215ENST00000484179 GALR2O43603 387 aaPredicted RBP12.81□□□□□ -0.36
USP34-215ENST00000484179 FKBP8Q14318 412 aa12.8□□□□□ -0.36
USP34-215ENST00000484179 POTEB2H3BUK9 544 aa12.79□□□□□ -0.36
USP34-215ENST00000484179 PLEKHG5O94827 1062 aa12.79□□□□□ -0.36
USP34-215ENST00000484179 MIER1Q8N108 512 aa12.78□□□□□ -0.36
USP34-215ENST00000484179 PHF12Q96QT6 1004 aa12.78□□□□□ -0.36
USP34-215ENST00000484179 POTEMA6NI47 508 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 148.9 ms