Protein–RNA interactions for Protein: O75940

SMNDC1, Survival of motor neuron-related-splicing factor 30, humanhuman

Known RBP eCLIP

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1O75940 MLXIPL-209ENST00000467221 774 ntTSL 59.76□□□□□ -0.858e-7■□□□□ 8.4
SMNDC1O75940 ZRANB2-203ENST00000473260 482 ntTSL 29.63□□□□□ -0.878e-7■□□□□ 8.4
SMNDC1O75940 ZRANB2-202ENST00000370920 3078 ntAPPRIS P4 TSL 1 (best) BASIC9.6□□□□□ -0.878e-7■□□□□ 8.4
SMNDC1O75940 ZRANB2-205ENST00000479947 470 ntTSL 28.82□□□□□ -18e-7■□□□□ 8.4
SMNDC1O75940 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.488e-7■□□□□ 8.4
SMNDC1O75940 ZRANB2-204ENST00000477096 3677 ntTSL 1 (best)2.75□□□□□ -1.978e-7■□□□□ 8.4
SMNDC1O75940 MAP2K3-206ENST00000479129 574 ntTSL 315.94■□□□□ 0.142e-14■□□□□ 8.4
SMNDC1O75940 MAP2K3-207ENST00000483928 511 ntTSL 515.94■□□□□ 0.142e-14■□□□□ 8.4
SMNDC1O75940 MAP2K3-213ENST00000583508 607 ntTSL 515.94■□□□□ 0.142e-14■□□□□ 8.4
SMNDC1O75940 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.142e-14■□□□□ 8.4
SMNDC1O75940 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC14.65□□□□□ -0.062e-14■□□□□ 8.4
SMNDC1O75940 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC14.27□□□□□ -0.122e-14■□□□□ 8.4
SMNDC1O75940 MAP2K3-208ENST00000496046 2089 ntTSL 513.51□□□□□ -0.252e-14■□□□□ 8.4
SMNDC1O75940 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC12.96□□□□□ -0.332e-14■□□□□ 8.4
SMNDC1O75940 MAP2K3-204ENST00000395491 2401 ntTSL 212.27□□□□□ -0.442e-14■□□□□ 8.4
SMNDC1O75940 MAP2K3-209ENST00000526076 575 ntTSL 48.72□□□□□ -1.012e-14■□□□□ 8.4
SMNDC1O75940 CALM2-207ENST00000484408 682 ntTSL 518.33■□□□□ 0.522e-10■□□□□ 8.3
SMNDC1O75940 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.312e-10■□□□□ 8.3
SMNDC1O75940 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.31■□□□□ 0.22e-10■□□□□ 8.3
SMNDC1O75940 CALM2-208ENST00000489742 522 ntTSL 314.36□□□□□ -0.112e-10■□□□□ 8.3
SMNDC1O75940 CALM2-203ENST00000432899 1004 ntTSL 512.2□□□□□ -0.462e-10■□□□□ 8.3
SMNDC1O75940 STPG4-206ENST00000422269 983 ntTSL 210.2□□□□□ -0.782e-10■□□□□ 8.3
SMNDC1O75940 CALM2-204ENST00000456319 703 ntTSL 29.08□□□□□ -0.962e-10■□□□□ 8.3
SMNDC1O75940 CALM2-202ENST00000409563 770 ntTSL 5 BASIC8.88□□□□□ -0.992e-10■□□□□ 8.3
SMNDC1O75940 CALM2-205ENST00000460218 4502 ntTSL 1 (best)1.65□□□□□ -2.142e-10■□□□□ 8.3
SMNDC1O75940 SRRM2-228ENST00000576878 1141 ntTSL 215.54■□□□□ 0.088e-9■□□□□ 8.3
SMNDC1O75940 SRRM2-204ENST00000570705 675 ntTSL 313.72□□□□□ -0.218e-9■□□□□ 8.3
SMNDC1O75940 SRRM2-206ENST00000571041 498 ntTSL 413.7□□□□□ -0.228e-9■□□□□ 8.3
SMNDC1O75940 HNRNPU-202ENST00000366525 2851 ntTSL 510.81□□□□□ -0.688e-9■□□□□ 8.3
SMNDC1O75940 HNRNPU-216ENST00000638716 2640 ntTSL 5 BASIC9.98□□□□□ -0.818e-9■□□□□ 8.3
SMNDC1O75940 HNRNPU-219ENST00000639628 4546 ntTSL 1 (best) BASIC8.65□□□□□ -1.028e-9■□□□□ 8.3
SMNDC1O75940 HNRNPU-222ENST00000639880 4239 ntTSL 58.55□□□□□ -1.048e-9■□□□□ 8.3
SMNDC1O75940 SNHG5-204ENST00000425170 489 ntTSL 28.18□□□□□ -1.16e-47■□□□□ 8.3
SMNDC1O75940 TFRC-214ENST00000483983 757 ntTSL 28.08□□□□□ -1.128e-9■□□□□ 8.3
SMNDC1O75940 HNRNPU-223ENST00000640001 4227 ntTSL 5 BASIC7.68□□□□□ -1.188e-9■□□□□ 8.3
SMNDC1O75940 HNRNPU-206ENST00000465881 883 ntTSL 57.61□□□□□ -1.198e-9■□□□□ 8.3
SMNDC1O75940 HNRNPU-213ENST00000638301 3650 ntTSL 56.96□□□□□ -1.298e-9■□□□□ 8.3
SMNDC1O75940 HNRNPU-215ENST00000638589 2225 ntTSL 25.8□□□□□ -1.488e-9■□□□□ 8.3
SMNDC1O75940 TFRC-211ENST00000475593 875 ntTSL 35.42□□□□□ -1.548e-9■□□□□ 8.3
SMNDC1O75940 HNRNPU-220ENST00000639667 3940 ntTSL 25.24□□□□□ -1.578e-9■□□□□ 8.3
SMNDC1O75940 SNORD50B-201ENST00000364995 70 ntBASIC4.28□□□□□ -1.726e-47■□□□□ 8.3
SMNDC1O75940 TFRC-206ENST00000463047 549 ntTSL 24.02□□□□□ -1.778e-9■□□□□ 8.3
SMNDC1O75940 SNHG5-208ENST00000433843 388 ntTSL 24.01□□□□□ -1.776e-47■□□□□ 8.3
SMNDC1O75940 TRIM28-205ENST00000595028 486 ntTSL 213.53□□□□□ -0.244e-16■□□□□ 8.3
SMNDC1O75940 CD164-208ENST00000506649 778 ntTSL 319.16■□□□□ 0.662e-7■□□□□ 8.3
SMNDC1O75940 TLK1-202ENST00000360843 5726 ntTSL 1 (best) BASIC12.79□□□□□ -0.362e-7■□□□□ 8.3
SMNDC1O75940 CD164-209ENST00000512212 590 ntTSL 212.61□□□□□ -0.392e-7■□□□□ 8.3
SMNDC1O75940 CD164-210ENST00000512821 964 ntTSL 2 BASIC12.61□□□□□ -0.392e-7■□□□□ 8.3
SMNDC1O75940 TLK1-205ENST00000431350 5663 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.392e-7■□□□□ 8.3
SMNDC1O75940 CD164-204ENST00000413644 2414 ntTSL 1 (best) BASIC11.88□□□□□ -0.512e-7■□□□□ 8.3
SMNDC1O75940 CD164-202ENST00000310786 2993 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.712e-7■□□□□ 8.3
SMNDC1O75940 CD164-203ENST00000324953 2936 ntTSL 1 (best) BASIC10.55□□□□□ -0.722e-7■□□□□ 8.3
SMNDC1O75940 TLK1-201ENST00000359766 4321 ntTSL 510.22□□□□□ -0.772e-7■□□□□ 8.3
SMNDC1O75940 CD164-201ENST00000275080 2954 ntTSL 1 (best) BASIC9.54□□□□□ -0.882e-7■□□□□ 8.3
SMNDC1O75940 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC7.53□□□□□ -1.22e-7■□□□□ 8.3
SMNDC1O75940 HSP90AA1-205ENST00000555662 429 ntTSL 26.23□□□□□ -1.412e-7■□□□□ 8.3
SMNDC1O75940 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC4.52□□□□□ -1.692e-7■□□□□ 8.3
SMNDC1O75940 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.22□□□□□ -1.732e-7■□□□□ 8.3
SMNDC1O75940 CD164-206ENST00000499860 2845 ntTSL 1 (best)2.43□□□□□ -2.022e-7■□□□□ 8.3
SMNDC1O75940 SNORD12B-201ENST00000410433 91 ntBASIC4.47□□□□□ -1.691e-323■□□□□ 8.3
SMNDC1O75940 TAF1D-206ENST00000527068 1023 ntTSL 510.6□□□□□ -0.711e-323■□□□□ 8.3
SMNDC1O75940 SNORA18-201ENST00000384416 132 ntBASIC2.6□□□□□ -1.991e-323■□□□□ 8.3
SMNDC1O75940 COL27A1-204ENST00000477421 3991 ntTSL 211.16□□□□□ -0.622e-11■□□□□ 8.3
SMNDC1O75940 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 15e-7■□□□□ 8.3
SMNDC1O75940 TNFRSF10B-207ENST00000523504 1464 ntTSL 219.11■□□□□ 0.655e-7■□□□□ 8.3
SMNDC1O75940 TNFRSF10B-206ENST00000520109 674 ntTSL 217.33■□□□□ 0.365e-7■□□□□ 8.3
SMNDC1O75940 SNHG11-202ENST00000400436 2652 ntTSL 216.22■□□□□ 0.193e-16■□□□□ 8.3
SMNDC1O75940 CYBRD1-207ENST00000494587 549 ntTSL 415.75■□□□□ 0.115e-7■□□□□ 8.3
SMNDC1O75940 SNHG11-213ENST00000453698 1322 ntTSL 515.71■□□□□ 0.113e-16■□□□□ 8.3
SMNDC1O75940 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC15.47■□□□□ 0.073e-16■□□□□ 8.3
SMNDC1O75940 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC15.47■□□□□ 0.073e-16■□□□□ 8.3
SMNDC1O75940 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC15.22■□□□□ 0.033e-16■□□□□ 8.3
SMNDC1O75940 SNHG11-215ENST00000483342 1509 ntTSL 1 (best)15.16■□□□□ 0.023e-16■□□□□ 8.3
SMNDC1O75940 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC14.81□□□□□ -0.045e-7■□□□□ 8.3
SMNDC1O75940 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.71□□□□□ -0.053e-16■□□□□ 8.3
SMNDC1O75940 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.62□□□□□ -0.073e-16■□□□□ 8.3
SMNDC1O75940 CYBRD1-205ENST00000468308 763 ntTSL 314.13□□□□□ -0.155e-7■□□□□ 8.3
SMNDC1O75940 SNHG11-208ENST00000437028 1169 ntTSL 313.95□□□□□ -0.183e-16■□□□□ 8.3
SMNDC1O75940 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC13.78□□□□□ -0.23e-16■□□□□ 8.3
SMNDC1O75940 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC13.71□□□□□ -0.213e-16■□□□□ 8.3
SMNDC1O75940 CYBRD1-206ENST00000474182 465 ntTSL 513.57□□□□□ -0.245e-7■□□□□ 8.3
SMNDC1O75940 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.285e-7■□□□□ 8.3
SMNDC1O75940 TNFRSF10B-201ENST00000276431 4146 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.445e-7■□□□□ 8.3
SMNDC1O75940 MKRN2-203ENST00000448482 1679 ntTSL 5 BASIC11.97□□□□□ -0.495e-7■□□□□ 8.3
SMNDC1O75940 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC11.95□□□□□ -0.55e-7■□□□□ 8.3
SMNDC1O75940 CYBRD1-202ENST00000375252 3540 ntTSL 1 (best) BASIC11.82□□□□□ -0.525e-7■□□□□ 8.3
SMNDC1O75940 TTC14-201ENST00000296015 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.675e-7■□□□□ 8.3
SMNDC1O75940 TTC14-207ENST00000470669 3150 ntTSL 1 (best)10.48□□□□□ -0.735e-7■□□□□ 8.3
SMNDC1O75940 TTC14-203ENST00000412756 4568 ntTSL 1 (best) BASIC10.34□□□□□ -0.755e-7■□□□□ 8.3
SMNDC1O75940 SNHG11-210ENST00000442419 741 ntTSL 310.26□□□□□ -0.773e-16■□□□□ 8.3
SMNDC1O75940 TTC14-205ENST00000465065 7052 ntTSL 1 (best)10.15□□□□□ -0.785e-7■□□□□ 8.3
SMNDC1O75940 CYBRD1-201ENST00000321348 4365 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.795e-7■□□□□ 8.3
SMNDC1O75940 SNHG11-211ENST00000444816 621 ntTSL 1 (best) BASIC10.06□□□□□ -0.83e-16■□□□□ 8.3
SMNDC1O75940 SNHG11-214ENST00000457218 880 ntTSL 1 (best) BASIC10.06□□□□□ -0.83e-16■□□□□ 8.3
SMNDC1O75940 TNFRSF10B-208ENST00000523752 3328 ntTSL 1 (best)8.37□□□□□ -1.075e-7■□□□□ 8.3
SMNDC1O75940 TTC14-206ENST00000465625 758 ntTSL 38.04□□□□□ -1.125e-7■□□□□ 8.3
SMNDC1O75940 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC6.13□□□□□ -1.435e-7■□□□□ 8.3
SMNDC1O75940 SNORA60-201ENST00000362396 134 ntBASIC3.63□□□□□ -1.833e-16■□□□□ 8.3
SMNDC1O75940 COL9A3-204ENST00000463487 760 ntTSL 517.67■□□□□ 0.429e-7■□□□□ 8.2
SMNDC1O75940 HSP90AA1-203ENST00000553585 581 ntTSL 38.25□□□□□ -1.099e-8■□□□□ 8.2
Retrieved 100 of 11,362 protein–RNA pairs in 155.9 ms