RNA–Protein interactions for RNA: ENST00000425170.1

SNHG5-204, Transcript of small nucleolar RNA host gene 5, humanhuman

TSL 2

Gene SNHG5, Length 489 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG5-204ENST00000425170 AEBP2Q6ZN18 517 aaPredicted RBP25.72■■□□□ 1.71
SNHG5-204ENST00000425170 CHIC1Q5VXU3 224 aa23.98■■□□□ 1.43
SNHG5-204ENST00000425170 SENP3Q9H4L4 574 aaPredicted RBP21.85■■□□□ 1.09
SNHG5-204ENST00000425170 PHF23Q9BUL5 403 aaPredicted RBP21.57■■□□□ 1.04
SNHG5-204ENST00000425170 FOXD1Q16676 465 aa20.51■□□□□ 0.87
SNHG5-204ENST00000425170 POTEDQ86YR6 584 aa19.49■□□□□ 0.71
SNHG5-204ENST00000425170 MSH5O43196 834 aa19.22■□□□□ 0.67
SNHG5-204ENST00000425170 PIAS4Q8N2W9 510 aaPredicted RBP19■□□□□ 0.63
SNHG5-204ENST00000425170 PPP6R1Q9UPN7 881 aa18.94■□□□□ 0.62
SNHG5-204ENST00000425170 PLPPR3Q6T4P5 718 aa18.93■□□□□ 0.62
SNHG5-204ENST00000425170 ADRA2BP18089 450 aa18.81■□□□□ 0.6
SNHG5-204ENST00000425170 MAPK8IP2Q13387 824 aaPredicted RBP17.42■□□□□ 0.38
SNHG5-204ENST00000425170 DMRT2Q9Y5R5 561 aa17.32■□□□□ 0.36
SNHG5-204ENST00000425170 SCAF1Q9H7N4 1312 aaKnown RBP17.04■□□□□ 0.32
SNHG5-204ENST00000425170 CACNB1Q02641 598 aaPredicted RBP16.73■□□□□ 0.27
SNHG5-204ENST00000425170 PPP4R3CPQ6ZMV5 832 aa16.58■□□□□ 0.24
SNHG5-204ENST00000425170 DCAF8L1A6NGE4 600 aa16.56■□□□□ 0.24
SNHG5-204ENST00000425170 HOXD11P31277 338 aaPredicted RBP16.54■□□□□ 0.24
SNHG5-204ENST00000425170 RNF39Q9H2S5 420 aa16.44■□□□□ 0.22
SNHG5-204ENST00000425170 CNKSR2Q8WXI2 1034 aa16.32■□□□□ 0.2
SNHG5-204ENST00000425170 RNF216Q9NWF9 866 aaPredicted RBP16.28■□□□□ 0.2
SNHG5-204ENST00000425170 C1QBPQ07021 282 aaKnown RBP16.11■□□□□ 0.17
SNHG5-204ENST00000425170 DNAJC5BQ9UF47 199 aa15.99■□□□□ 0.15
SNHG5-204ENST00000425170 KCNA4P22459 653 aa15.83■□□□□ 0.12
SNHG5-204ENST00000425170 EHMT2Q96KQ7 1210 aa15.78■□□□□ 0.12
SNHG5-204ENST00000425170 NCBP3Q53F19 620 aaKnown RBP15.72■□□□□ 0.11
SNHG5-204ENST00000425170 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.68■□□□□ 0.1
SNHG5-204ENST00000425170 NPM3O75607 178 aaKnown RBP15.64■□□□□ 0.09
SNHG5-204ENST00000425170 U3KPZ7 1027 aaPredicted RBP15.41■□□□□ 0.06
SNHG5-204ENST00000425170 SLC4A1APQ9BWU0 796 aaKnown RBP15.33■□□□□ 0.04
SNHG5-204ENST00000425170 SPINK5Q9NQ38 1064 aaPredicted RBP15.31■□□□□ 0.04
SNHG5-204ENST00000425170 DSG3P32926 999 aa15.28■□□□□ 0.04
SNHG5-204ENST00000425170 CAPN15O75808 1086 aa15.21■□□□□ 0.03
SNHG5-204ENST00000425170 CSRNP3Q8WYN3 585 aa15.21■□□□□ 0.03
SNHG5-204ENST00000425170 POTEHQ6S545 545 aa15.17■□□□□ 0.02
SNHG5-204ENST00000425170 SLC4A2P04920 1241 aa15.07■□□□□ 0
SNHG5-204ENST00000425170 TRHP20396 242 aaPredicted RBP14.89□□□□□ -0.03
SNHG5-204ENST00000425170 ABCB7O75027 752 aa14.88□□□□□ -0.03
SNHG5-204ENST00000425170 ZNF219Q9P2Y4 722 aaPredicted RBP14.81□□□□□ -0.04
SNHG5-204ENST00000425170 APLP2Q06481 763 aa14.74□□□□□ -0.05
SNHG5-204ENST00000425170 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.68□□□□□ -0.06
SNHG5-204ENST00000425170 HNRNPUL2Q1KMD3 747 aaKnown RBP14.68□□□□□ -0.06
SNHG5-204ENST00000425170 SAMD1Q6SPF0 538 aaPredicted RBP14.62□□□□□ -0.07
SNHG5-204ENST00000425170 ZBTB22O15209 634 aa14.53□□□□□ -0.08
SNHG5-204ENST00000425170 RBM42Q9BTD8 480 aaKnown RBP14.47□□□□□ -0.09
SNHG5-204ENST00000425170 FOXD4L1Q9NU39 408 aa14.46□□□□□ -0.09
SNHG5-204ENST00000425170 POLA2Q14181 598 aa14.42□□□□□ -0.1
SNHG5-204ENST00000425170 MYCNP04198 464 aaPredicted RBP14.41□□□□□ -0.1
SNHG5-204ENST00000425170 CHRDL2Q6WN34 429 aa14.37□□□□□ -0.11
SNHG5-204ENST00000425170 ATF5Q9Y2D1 282 aaPredicted RBP14.23□□□□□ -0.13
SNHG5-204ENST00000425170 AMER1Q5JTC6 1135 aaPredicted RBP14.18□□□□□ -0.14
SNHG5-204ENST00000425170 SLC24A1O60721 1099 aa14.15□□□□□ -0.14
SNHG5-204ENST00000425170 AKT1S1Q96B36 256 aa14.11□□□□□ -0.15
SNHG5-204ENST00000425170 SP7Q8TDD2 431 aaPredicted RBP14.04□□□□□ -0.16
SNHG5-204ENST00000425170 REM2Q8IYK8 340 aaPredicted RBP14.02□□□□□ -0.17
SNHG5-204ENST00000425170 OSCARQ8IYS5 282 aa14.01□□□□□ -0.17
SNHG5-204ENST00000425170 ZBTB12Q9Y330 459 aaPredicted RBP14.01□□□□□ -0.17
SNHG5-204ENST00000425170 PIP4P2Q8N4L2 257 aa13.99□□□□□ -0.17
SNHG5-204ENST00000425170 RTN4Q9NQC3 1192 aaKnown RBP13.98□□□□□ -0.17
SNHG5-204ENST00000425170 ATXN8OSP0DMR3 200 aa13.97□□□□□ -0.17
SNHG5-204ENST00000425170 PITPNM1O00562 1244 aa13.9□□□□□ -0.18
SNHG5-204ENST00000425170 FXR2P51116 673 aaKnown RBP eCLIP13.84□□□□□ -0.19
SNHG5-204ENST00000425170 HAX1O00165 279 aa13.77□□□□□ -0.21
SNHG5-204ENST00000425170 FKBP8Q14318 412 aa13.74□□□□□ -0.21
SNHG5-204ENST00000425170 EVX2Q03828 476 aa13.71□□□□□ -0.21
SNHG5-204ENST00000425170 SPDYE2BA6NHP3 402 aa13.6□□□□□ -0.23
SNHG5-204ENST00000425170 SPDYE6P0CI01 402 aa13.6□□□□□ -0.23
SNHG5-204ENST00000425170 SPDYE2Q495Y8 402 aa13.6□□□□□ -0.23
SNHG5-204ENST00000425170 MKRN4PQ13434 485 aaPredicted RBP13.55□□□□□ -0.24
SNHG5-204ENST00000425170 FBLN2P98095 1184 aa13.51□□□□□ -0.25
SNHG5-204ENST00000425170 PRKAR2AP13861 404 aaKnown RBP13.49□□□□□ -0.25
SNHG5-204ENST00000425170 CLEC11AQ9Y240 323 aa13.45□□□□□ -0.26
SNHG5-204ENST00000425170 SPDYE1Q8NFV5 336 aaPredicted RBP13.44□□□□□ -0.26
SNHG5-204ENST00000425170 SSUH2Q9Y2M2 353 aa13.44□□□□□ -0.26
SNHG5-204ENST00000425170 C19orf67A6NJJ6 358 aa13.41□□□□□ -0.26
SNHG5-204ENST00000425170 ZNF692Q9BU19 519 aaPredicted RBP13.38□□□□□ -0.27
SNHG5-204ENST00000425170 CHADLQ6NUI6 762 aa13.31□□□□□ -0.28
SNHG5-204ENST00000425170 GABBR2O75899 941 aa13.3□□□□□ -0.28
SNHG5-204ENST00000425170 FBXO3Q9UK99 471 aa13.2□□□□□ -0.3
SNHG5-204ENST00000425170 PABPN1Q86U42 306 aaKnown RBP eCLIP13.19□□□□□ -0.3
SNHG5-204ENST00000425170 PRR29P0C7W0 189 aa13.16□□□□□ -0.3
SNHG5-204ENST00000425170 LHX8Q68G74 356 aa13.15□□□□□ -0.3
SNHG5-204ENST00000425170 POTEIP0CG38 1075 aa13.09□□□□□ -0.31
SNHG5-204ENST00000425170 CD44P16070 742 aaKnown RBP13.03□□□□□ -0.32
SNHG5-204ENST00000425170 FARP1Q9Y4F1 1045 aaPredicted RBP13.03□□□□□ -0.32
SNHG5-204ENST00000425170 PLCB2Q00722 1185 aa12.98□□□□□ -0.33
SNHG5-204ENST00000425170 SPDYE4A6NLX3 237 aa12.96□□□□□ -0.33
SNHG5-204ENST00000425170 PROM2Q8N271 834 aa12.88□□□□□ -0.35
SNHG5-204ENST00000425170 VASPP50552 380 aaPredicted RBP12.87□□□□□ -0.35
SNHG5-204ENST00000425170 CREBZFQ9NS37 354 aa12.84□□□□□ -0.35
SNHG5-204ENST00000425170 CLCN6P51797 869 aa12.83□□□□□ -0.36
SNHG5-204ENST00000425170 ZNF579Q8NAF0 562 aaKnown RBP12.83□□□□□ -0.36
SNHG5-204ENST00000425170 ZRANB1Q9UGI0 708 aa12.79□□□□□ -0.36
SNHG5-204ENST00000425170 DCBLD2Q96PD2 775 aa12.78□□□□□ -0.36
SNHG5-204ENST00000425170 HAP1P54257 671 aaPredicted RBP12.75□□□□□ -0.37
SNHG5-204ENST00000425170 GALR2O43603 387 aaPredicted RBP12.74□□□□□ -0.37
SNHG5-204ENST00000425170 BCANQ96GW7 911 aa12.74□□□□□ -0.37
SNHG5-204ENST00000425170 DCAF8L2P0C7V8 631 aa12.73□□□□□ -0.37
SNHG5-204ENST00000425170 VSIG10Q8N0Z9 540 aa12.68□□□□□ -0.38
SNHG5-204ENST00000425170 IFNLR1Q8IU57 520 aaPredicted RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms