RNA–Protein interactions for RNA: ENST00000638301.1

HNRNPU-213, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 3,650 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-213ENST00000638301 NISCHQ9Y2I1 1504 aa13.82□□□□□ -0.2
HNRNPU-213ENST00000638301 SHROOM4Q9ULL8 1493 aa11.76□□□□□ -0.53
HNRNPU-213ENST00000638301 CCDC180Q9P1Z9 1646 aa11.74□□□□□ -0.53
HNRNPU-213ENST00000638301 ZCCHC6Q5VYS8 1495 aaKnown RBP11.71□□□□□ -0.54
HNRNPU-213ENST00000638301 SUPT5HO00267 1087 aaKnown RBP11.55□□□□□ -0.56
HNRNPU-213ENST00000638301 DCAF1Q9Y4B6 1507 aa11.36□□□□□ -0.59
HNRNPU-213ENST00000638301 DCAF8L2P0C7V8 631 aa11.36□□□□□ -0.59
HNRNPU-213ENST00000638301 CHIC1Q5VXU3 224 aa11.3□□□□□ -0.6
HNRNPU-213ENST00000638301 MYO15BQ96JP2 1530 aa11.29□□□□□ -0.6
HNRNPU-213ENST00000638301 ABCC9O60706 1549 aa11.05□□□□□ -0.64
HNRNPU-213ENST00000638301 HRCP23327 699 aa11.03□□□□□ -0.64
HNRNPU-213ENST00000638301 SCRIBQ14160 1630 aa10.98□□□□□ -0.65
HNRNPU-213ENST00000638301 PCGF6Q9BYE7 350 aa10.97□□□□□ -0.65
HNRNPU-213ENST00000638301 LOC105371045A0A1W2PR82 267 aa10.96□□□□□ -0.66
HNRNPU-213ENST00000638301 RSF1Q96T23 1441 aaPredicted RBP10.95□□□□□ -0.66
HNRNPU-213ENST00000638301 RB1CC1Q8TDY2 1594 aa10.85□□□□□ -0.67
HNRNPU-213ENST00000638301 NACADO15069 1562 aa10.83□□□□□ -0.68
HNRNPU-213ENST00000638301 PPARGC1BQ86YN6 1023 aaKnown RBP10.78□□□□□ -0.68
HNRNPU-213ENST00000638301 CECR2Q9BXF3 1484 aa10.78□□□□□ -0.68
HNRNPU-213ENST00000638301 TRIM26Q12899 539 aaPredicted RBP10.76□□□□□ -0.69
HNRNPU-213ENST00000638301 TRIM41Q8WV44 630 aa10.76□□□□□ -0.69
HNRNPU-213ENST00000638301 MROH2BQ7Z745 1585 aa10.75□□□□□ -0.69
HNRNPU-213ENST00000638301 WIZO95785 1651 aa10.7□□□□□ -0.7
HNRNPU-213ENST00000638301 FAM9AQ8IZU1 332 aaPredicted RBP10.66□□□□□ -0.7
HNRNPU-213ENST00000638301 BAZ1AQ9NRL2 1556 aaPredicted RBP10.63□□□□□ -0.71
HNRNPU-213ENST00000638301 EIF4G1Q04637 1599 aaKnown RBP10.61□□□□□ -0.71
HNRNPU-213ENST00000638301 EHMT2Q96KQ7 1210 aa10.55□□□□□ -0.72
HNRNPU-213ENST00000638301 ZEB1P37275 1124 aaPredicted RBP10.53□□□□□ -0.72
HNRNPU-213ENST00000638301 UNC13AQ9UPW8 1703 aa10.53□□□□□ -0.72
HNRNPU-213ENST00000638301 TOP2AP11388 1531 aaKnown RBP10.52□□□□□ -0.72
HNRNPU-213ENST00000638301 SMARCA4P51532 1647 aa10.52□□□□□ -0.73
HNRNPU-213ENST00000638301 CCDC88BA6NC98 1476 aa10.48□□□□□ -0.73
HNRNPU-213ENST00000638301 SMARCA2P51531 1590 aa10.48□□□□□ -0.73
HNRNPU-213ENST00000638301 ABCC8Q09428 1581 aa10.46□□□□□ -0.73
HNRNPU-213ENST00000638301 BICRAQ9NZM4 1560 aa10.38□□□□□ -0.75
HNRNPU-213ENST00000638301 SOGA1O94964 1423 aa10.37□□□□□ -0.75
HNRNPU-213ENST00000638301 WRNQ14191 1432 aaPredicted RBP eCLIP10.36□□□□□ -0.75
HNRNPU-213ENST00000638301 CEP162Q5TB80 1403 aa10.34□□□□□ -0.75
HNRNPU-213ENST00000638301 PEG3Q9GZU2 1588 aa10.33□□□□□ -0.76
HNRNPU-213ENST00000638301 RUSC2Q8N2Y8 1516 aa10.33□□□□□ -0.76
HNRNPU-213ENST00000638301 TNIKQ9UKE5 1360 aa10.33□□□□□ -0.76
HNRNPU-213ENST00000638301 EEA1Q15075 1411 aa10.32□□□□□ -0.76
HNRNPU-213ENST00000638301 PABPN1Q86U42 306 aaKnown RBP eCLIP10.32□□□□□ -0.76
HNRNPU-213ENST00000638301 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.31□□□□□ -0.76
HNRNPU-213ENST00000638301 CSRNP3Q8WYN3 585 aa10.3□□□□□ -0.76
HNRNPU-213ENST00000638301 CCER1Q8TC90 406 aaPredicted RBP10.27□□□□□ -0.77
HNRNPU-213ENST00000638301 GOLGA3Q08378 1498 aa10.24□□□□□ -0.77
HNRNPU-213ENST00000638301 SYNJ1O43426 1573 aa10.24□□□□□ -0.77
HNRNPU-213ENST00000638301 UBTFP17480 764 aaKnown RBP10.23□□□□□ -0.77
HNRNPU-213ENST00000638301 ATAD2BQ9ULI0 1458 aa10.23□□□□□ -0.77
HNRNPU-213ENST00000638301 TTBK1Q5TCY1 1321 aaPredicted RBP10.23□□□□□ -0.77
HNRNPU-213ENST00000638301 KIF21BO75037 1637 aa10.2□□□□□ -0.78
HNRNPU-213ENST00000638301 SCAF1Q9H7N4 1312 aaKnown RBP10.19□□□□□ -0.78
HNRNPU-213ENST00000638301 CEP164Q9UPV0 1460 aa10.18□□□□□ -0.78
HNRNPU-213ENST00000638301 BAZ1BQ9UIG0 1483 aaKnown RBP10.18□□□□□ -0.78
HNRNPU-213ENST00000638301 DNAJC5Q9H3Z4 198 aa10.14□□□□□ -0.79
HNRNPU-213ENST00000638301 CLIP1P30622 1438 aa10.13□□□□□ -0.79
HNRNPU-213ENST00000638301 RAPGEF2Q9Y4G8 1499 aa10.12□□□□□ -0.79
HNRNPU-213ENST00000638301 TOP2BQ02880 1626 aa10.12□□□□□ -0.79
HNRNPU-213ENST00000638301 DIEXFQ68CQ4 756 aaKnown RBP10.11□□□□□ -0.79
HNRNPU-213ENST00000638301 VPS8Q8N3P4 1428 aa10.1□□□□□ -0.79
HNRNPU-213ENST00000638301 BIVM-ERCC5R4GMW8 1640 aa10.09□□□□□ -0.79
HNRNPU-213ENST00000638301 ACIN1Q9UKV3 1341 aaKnown RBP10.07□□□□□ -0.8
HNRNPU-213ENST00000638301 NEUROD1Q13562 356 aa10.06□□□□□ -0.8
HNRNPU-213ENST00000638301 HNRNPUL2Q1KMD3 747 aaKnown RBP10.04□□□□□ -0.8
HNRNPU-213ENST00000638301 ZNF316A6NFI3 1004 aaPredicted RBP10.03□□□□□ -0.8
HNRNPU-213ENST00000638301 PRXQ9BXM0 1461 aa10.03□□□□□ -0.8
HNRNPU-213ENST00000638301 HMGXB3Q12766 1538 aa10.03□□□□□ -0.8
HNRNPU-213ENST00000638301 NCAPD3P42695 1498 aa10.03□□□□□ -0.8
HNRNPU-213ENST00000638301 ERICH3Q5RHP9 1530 aa10.02□□□□□ -0.8
HNRNPU-213ENST00000638301 DNAJC5BQ9UF47 199 aa10.01□□□□□ -0.81
HNRNPU-213ENST00000638301 CUX1P39880 1505 aa10□□□□□ -0.81
HNRNPU-213ENST00000638301 RANGAP1P46060 587 aaPredicted RBP10□□□□□ -0.81
HNRNPU-213ENST00000638301 APLP2Q06481 763 aa9.99□□□□□ -0.81
HNRNPU-213ENST00000638301 ARAP1Q96P48 1450 aa9.99□□□□□ -0.81
HNRNPU-213ENST00000638301 PELP1Q8IZL8 1130 aaKnown RBP9.98□□□□□ -0.81
HNRNPU-213ENST00000638301 CENPBP07199 599 aaPredicted RBP9.96□□□□□ -0.81
HNRNPU-213ENST00000638301 CFTRP13569 1480 aa9.96□□□□□ -0.82
HNRNPU-213ENST00000638301 GTF3C3Q9Y5Q9 886 aa9.94□□□□□ -0.82
HNRNPU-213ENST00000638301 KIF27Q86VH2 1401 aa9.94□□□□□ -0.82
HNRNPU-213ENST00000638301 KANK4Q5T7N3 995 aaPredicted RBP9.93□□□□□ -0.82
HNRNPU-213ENST00000638301 PRDM2Q13029 1718 aa9.91□□□□□ -0.82
HNRNPU-213ENST00000638301 MIER1Q8N108 512 aa9.91□□□□□ -0.82
HNRNPU-213ENST00000638301 DHX57Q6P158 1386 aaKnown RBP9.9□□□□□ -0.83
HNRNPU-213ENST00000638301 ARHGAP35Q9NRY4 1499 aa9.89□□□□□ -0.83
HNRNPU-213ENST00000638301 RRBP1Q9P2E9 1410 aaKnown RBP9.89□□□□□ -0.83
HNRNPU-213ENST00000638301 CLSPNQ9HAW4 1339 aa9.89□□□□□ -0.83
HNRNPU-213ENST00000638301 CUX2O14529 1486 aa9.85□□□□□ -0.83
HNRNPU-213ENST00000638301 IGF1RP08069 1367 aa9.85□□□□□ -0.83
HNRNPU-213ENST00000638301 YTHDC1Q96MU7 727 aaKnown RBP9.84□□□□□ -0.83
HNRNPU-213ENST00000638301 CCNB3Q8WWL7 1395 aa9.82□□□□□ -0.84
HNRNPU-213ENST00000638301 CADPSQ9ULU8 1353 aa9.82□□□□□ -0.84
HNRNPU-213ENST00000638301 FGD5Q6ZNL6 1462 aa9.8□□□□□ -0.84
HNRNPU-213ENST00000638301 MAP3K1Q13233 1512 aa9.8□□□□□ -0.84
HNRNPU-213ENST00000638301 TIAM1Q13009 1591 aa9.79□□□□□ -0.84
HNRNPU-213ENST00000638301 CARMIL1Q5VZK9 1371 aa9.79□□□□□ -0.84
HNRNPU-213ENST00000638301 LRRC9Q6ZRR7 1453 aa9.75□□□□□ -0.85
HNRNPU-213ENST00000638301 RAB3GAP2Q9H2M9 1393 aa9.74□□□□□ -0.85
HNRNPU-213ENST00000638301 MAPKBP1O60336 1514 aa9.74□□□□□ -0.85
HNRNPU-213ENST00000638301 CC2D2AQ9P2K1 1620 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms