RNA–Protein interactions for RNA: ENST00000413644.6

CD164-204, Transcript of CD164 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD164, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD164-204ENST00000413644 NISCHQ9Y2I1 1504 aa25.98■■□□□ 1.75
CD164-204ENST00000413644 CCDC180Q9P1Z9 1646 aa22.49■■□□□ 1.19
CD164-204ENST00000413644 ABCC9O60706 1549 aa22.15■■□□□ 1.14
CD164-204ENST00000413644 ZCCHC6Q5VYS8 1495 aaKnown RBP21.91■■□□□ 1.1
CD164-204ENST00000413644 SHROOM4Q9ULL8 1493 aa21.67■■□□□ 1.06
CD164-204ENST00000413644 DCAF8L2P0C7V8 631 aa21.44■■□□□ 1.02
CD164-204ENST00000413644 DCAF1Q9Y4B6 1507 aa21.41■■□□□ 1.02
CD164-204ENST00000413644 RB1CC1Q8TDY2 1594 aa21.3■■□□□ 1
CD164-204ENST00000413644 NACADO15069 1562 aa21.19■□□□□ 0.98
CD164-204ENST00000413644 SUPT5HO00267 1087 aaKnown RBP21.09■□□□□ 0.97
CD164-204ENST00000413644 MYO15BQ96JP2 1530 aa21■□□□□ 0.95
CD164-204ENST00000413644 UNC13AQ9UPW8 1703 aa20.79■□□□□ 0.92
CD164-204ENST00000413644 SCRIBQ14160 1630 aa20.73■□□□□ 0.91
CD164-204ENST00000413644 DNAJC5BQ9UF47 199 aa20.64■□□□□ 0.89
CD164-204ENST00000413644 BICRAQ9NZM4 1560 aa20.61■□□□□ 0.89
CD164-204ENST00000413644 PABPN1Q86U42 306 aaKnown RBP eCLIP20.54■□□□□ 0.88
CD164-204ENST00000413644 CHIC1Q5VXU3 224 aa20.42■□□□□ 0.86
CD164-204ENST00000413644 RSF1Q96T23 1441 aaPredicted RBP20.37■□□□□ 0.85
CD164-204ENST00000413644 CECR2Q9BXF3 1484 aa20.21■□□□□ 0.83
CD164-204ENST00000413644 MROH2BQ7Z745 1585 aa20.13■□□□□ 0.81
CD164-204ENST00000413644 CC2D2AQ9P2K1 1620 aa20.11■□□□□ 0.81
CD164-204ENST00000413644 EIF4G1Q04637 1599 aaKnown RBP20.11■□□□□ 0.81
CD164-204ENST00000413644 WIZO95785 1651 aa20■□□□□ 0.79
CD164-204ENST00000413644 BAZ1AQ9NRL2 1556 aaPredicted RBP19.99■□□□□ 0.79
CD164-204ENST00000413644 SMARCA4P51532 1647 aa19.86■□□□□ 0.77
CD164-204ENST00000413644 TRIM41Q8WV44 630 aa19.75■□□□□ 0.75
CD164-204ENST00000413644 TOP2AP11388 1531 aaKnown RBP19.74■□□□□ 0.75
CD164-204ENST00000413644 LOC105371045A0A1W2PR82 267 aa19.72■□□□□ 0.75
CD164-204ENST00000413644 CCDC88BA6NC98 1476 aa19.6■□□□□ 0.73
CD164-204ENST00000413644 SMARCA2P51531 1590 aa19.6■□□□□ 0.73
CD164-204ENST00000413644 PEG3Q9GZU2 1588 aa19.56■□□□□ 0.72
CD164-204ENST00000413644 NCAPD3P42695 1498 aa19.51■□□□□ 0.71
CD164-204ENST00000413644 FAM9AQ8IZU1 332 aaPredicted RBP19.47■□□□□ 0.71
CD164-204ENST00000413644 HMGXB3Q12766 1538 aa19.43■□□□□ 0.7
CD164-204ENST00000413644 ATAD2BQ9ULI0 1458 aa19.42■□□□□ 0.7
CD164-204ENST00000413644 ABCC8Q09428 1581 aa19.38■□□□□ 0.69
CD164-204ENST00000413644 BAZ1BQ9UIG0 1483 aaKnown RBP19.34■□□□□ 0.69
CD164-204ENST00000413644 PCGF6Q9BYE7 350 aa19.32■□□□□ 0.68
CD164-204ENST00000413644 CUX2O14529 1486 aa19.25■□□□□ 0.67
CD164-204ENST00000413644 EHMT2Q96KQ7 1210 aa19.23■□□□□ 0.67
CD164-204ENST00000413644 ERCC6Q03468 1493 aa19.17■□□□□ 0.66
CD164-204ENST00000413644 WRNQ14191 1432 aaPredicted RBP eCLIP19.15■□□□□ 0.663e-7■■□□□ 13.1
CD164-204ENST00000413644 TRIM26Q12899 539 aaPredicted RBP19.13■□□□□ 0.65
CD164-204ENST00000413644 SOGA1O94964 1423 aa19.12■□□□□ 0.65
CD164-204ENST00000413644 HRCP23327 699 aa19.12■□□□□ 0.65
CD164-204ENST00000413644 LAMC3Q9Y6N6 1575 aa19.1■□□□□ 0.65
CD164-204ENST00000413644 EEA1Q15075 1411 aa19.08■□□□□ 0.64
CD164-204ENST00000413644 SYNJ1O43426 1573 aa19.06■□□□□ 0.64
CD164-204ENST00000413644 RUSC2Q8N2Y8 1516 aa19.04■□□□□ 0.64
CD164-204ENST00000413644 NESP48681 1621 aa19.03■□□□□ 0.64
CD164-204ENST00000413644 DNAJC5Q9H3Z4 198 aa19.02■□□□□ 0.64
CD164-204ENST00000413644 CSRNP3Q8WYN3 585 aa19.01■□□□□ 0.63
CD164-204ENST00000413644 THOC2Q8NI27 1593 aaKnown RBP18.98■□□□□ 0.63
CD164-204ENST00000413644 PDS5BQ9NTI5 1447 aa18.93■□□□□ 0.62
CD164-204ENST00000413644 TNIKQ9UKE5 1360 aa18.93■□□□□ 0.62
CD164-204ENST00000413644 TOP2BQ02880 1626 aa18.91■□□□□ 0.62
CD164-204ENST00000413644 KIF21AQ7Z4S6 1674 aa18.91■□□□□ 0.62
CD164-204ENST00000413644 CFTRP13569 1480 aa18.88■□□□□ 0.61
CD164-204ENST00000413644 CEP162Q5TB80 1403 aa18.88■□□□□ 0.61
CD164-204ENST00000413644 GOLGA3Q08378 1498 aa18.87■□□□□ 0.61
CD164-204ENST00000413644 BIVM-ERCC5R4GMW8 1640 aa18.87■□□□□ 0.61
CD164-204ENST00000413644 CADPSQ9ULU8 1353 aa18.87■□□□□ 0.61
CD164-204ENST00000413644 UBTFP17480 764 aaKnown RBP18.85■□□□□ 0.61
CD164-204ENST00000413644 KIF21BO75037 1637 aa18.82■□□□□ 0.6
CD164-204ENST00000413644 CEP164Q9UPV0 1460 aa18.82■□□□□ 0.6
CD164-204ENST00000413644 PPARGC1BQ86YN6 1023 aaKnown RBP18.78■□□□□ 0.6
CD164-204ENST00000413644 CUX1P39880 1505 aa18.78■□□□□ 0.6
CD164-204ENST00000413644 MRC2Q9UBG0 1479 aa18.77■□□□□ 0.6
CD164-204ENST00000413644 PRDM2Q13029 1718 aa18.77■□□□□ 0.59
CD164-204ENST00000413644 WDR62O43379 1518 aa18.75■□□□□ 0.59
CD164-204ENST00000413644 RAPGEF2Q9Y4G8 1499 aa18.69■□□□□ 0.58
CD164-204ENST00000413644 FANCD2Q9BXW9 1451 aa18.65■□□□□ 0.58
CD164-204ENST00000413644 CLIP1P30622 1438 aa18.61■□□□□ 0.57
CD164-204ENST00000413644 PRXQ9BXM0 1461 aa18.61■□□□□ 0.57
CD164-204ENST00000413644 KIF27Q86VH2 1401 aa18.61■□□□□ 0.57
CD164-204ENST00000413644 ERICH3Q5RHP9 1530 aa18.6■□□□□ 0.57
CD164-204ENST00000413644 ZEB1P37275 1124 aaPredicted RBP18.58■□□□□ 0.57
CD164-204ENST00000413644 TTBK1Q5TCY1 1321 aaPredicted RBP18.53■□□□□ 0.56
CD164-204ENST00000413644 VPS8Q8N3P4 1428 aa18.51■□□□□ 0.55
CD164-204ENST00000413644 FGD5Q6ZNL6 1462 aa18.49■□□□□ 0.55
CD164-204ENST00000413644 URB2Q14146 1524 aaKnown RBP18.48■□□□□ 0.55
CD164-204ENST00000413644 RANGAP1P46060 587 aaPredicted RBP18.46■□□□□ 0.55
CD164-204ENST00000413644 IGF1RP08069 1367 aa18.43■□□□□ 0.54
CD164-204ENST00000413644 DNMBPQ6XZF7 1577 aa18.41■□□□□ 0.54
CD164-204ENST00000413644 ARAP1Q96P48 1450 aa18.37■□□□□ 0.53
CD164-204ENST00000413644 TOPBP1Q92547 1522 aa18.37■□□□□ 0.53
CD164-204ENST00000413644 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.37■□□□□ 0.53
CD164-204ENST00000413644 APLP2Q06481 763 aa18.37■□□□□ 0.53
CD164-204ENST00000413644 IFT140Q96RY7 1462 aa18.35■□□□□ 0.53
CD164-204ENST00000413644 CARMIL1Q5VZK9 1371 aa18.34■□□□□ 0.53
CD164-204ENST00000413644 POLA1P09884 1462 aaPredicted RBP18.33■□□□□ 0.52
CD164-204ENST00000413644 CCER1Q8TC90 406 aaPredicted RBP18.32■□□□□ 0.52
CD164-204ENST00000413644 RAD54L2Q9Y4B4 1467 aa18.32■□□□□ 0.52
CD164-204ENST00000413644 ABCA10Q8WWZ4 1543 aa18.31■□□□□ 0.52
CD164-204ENST00000413644 ARHGAP35Q9NRY4 1499 aa18.28■□□□□ 0.52
CD164-204ENST00000413644 OSCARQ8IYS5 282 aa18.24■□□□□ 0.51
CD164-204ENST00000413644 WDR97A6NE52 1622 aa18.2■□□□□ 0.5
CD164-204ENST00000413644 EIF4G3O43432 1585 aaKnown RBP18.19■□□□□ 0.5
CD164-204ENST00000413644 ZNF608Q9ULD9 1512 aaPredicted RBP18.19■□□□□ 0.5
CD164-204ENST00000413644 TARBP1Q13395 1621 aaKnown RBP18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms