RNA–Protein interactions for RNA: ENST00000506649.5

CD164-208, Transcript of CD164 molecule, humanhuman

TSL 3

Gene CD164, Length 778 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD164-208ENST00000506649 NISCHQ9Y2I1 1504 aa52.92■■■■■ 6.06
CD164-208ENST00000506649 CCDC180Q9P1Z9 1646 aa47.43■■■■■ 5.18
CD164-208ENST00000506649 ABCC9O60706 1549 aa47.22■■■■■ 5.15
CD164-208ENST00000506649 RB1CC1Q8TDY2 1594 aa45.1■■■■■ 4.81
CD164-208ENST00000506649 NACADO15069 1562 aa44.86■■■■■ 4.77
CD164-208ENST00000506649 DCAF8L2P0C7V8 631 aa44.57■■■■■ 4.73
CD164-208ENST00000506649 MYO15BQ96JP2 1530 aa44.36■■■■■ 4.69
CD164-208ENST00000506649 DNAJC5BQ9UF47 199 aa44.15■■■■■ 4.66
CD164-208ENST00000506649 PABPN1Q86U42 306 aaKnown RBP eCLIP43.99■■■■■ 4.63
CD164-208ENST00000506649 UNC13AQ9UPW8 1703 aa43.9■■■■■ 4.62
CD164-208ENST00000506649 ZCCHC6Q5VYS8 1495 aaKnown RBP43.89■■■■■ 4.62
CD164-208ENST00000506649 DCAF1Q9Y4B6 1507 aa43.81■■■■■ 4.6
CD164-208ENST00000506649 BICRAQ9NZM4 1560 aa43.69■■■■■ 4.58
CD164-208ENST00000506649 SHROOM4Q9ULL8 1493 aa43.32■■■■■ 4.53
CD164-208ENST00000506649 SCRIBQ14160 1630 aa43.13■■■■■ 4.49
CD164-208ENST00000506649 CC2D2AQ9P2K1 1620 aa42.67■■■■■ 4.42
CD164-208ENST00000506649 EIF4G1Q04637 1599 aaKnown RBP42.65■■■■■ 4.42
CD164-208ENST00000506649 CECR2Q9BXF3 1484 aa42.58■■■■■ 4.41
CD164-208ENST00000506649 NCAPD3P42695 1498 aa41.42■■■■■ 4.22
CD164-208ENST00000506649 ATAD2BQ9ULI0 1458 aa41.26■■■■■ 4.2
CD164-208ENST00000506649 SMARCA4P51532 1647 aa41.22■■■■■ 4.19
CD164-208ENST00000506649 SMARCA2P51531 1590 aa41.2■■■■■ 4.19
CD164-208ENST00000506649 HMGXB3Q12766 1538 aa41.1■■■■■ 4.17
CD164-208ENST00000506649 BAZ1AQ9NRL2 1556 aaPredicted RBP41.1■■■■■ 4.17
CD164-208ENST00000506649 PEG3Q9GZU2 1588 aa40.88■■■■■ 4.13
CD164-208ENST00000506649 BAZ1BQ9UIG0 1483 aaKnown RBP40.88■■■■■ 4.13
CD164-208ENST00000506649 ERCC6Q03468 1493 aa40.83■■■■■ 4.13
CD164-208ENST00000506649 CUX2O14529 1486 aa40.77■■■■■ 4.12
CD164-208ENST00000506649 MROH2BQ7Z745 1585 aa40.73■■■■■ 4.11
CD164-208ENST00000506649 NESP48681 1621 aa40.57■■■■■ 4.09
CD164-208ENST00000506649 DNAJC5Q9H3Z4 198 aa40.55■■■■■ 4.08
CD164-208ENST00000506649 LAMC3Q9Y6N6 1575 aa40.44■■■■■ 4.06
CD164-208ENST00000506649 PDS5BQ9NTI5 1447 aa40.25■■■■■ 4.03
CD164-208ENST00000506649 WIZO95785 1651 aa40.2■■■■■ 4.03
CD164-208ENST00000506649 CADPSQ9ULU8 1353 aa40.17■■■■■ 4.02
CD164-208ENST00000506649 THOC2Q8NI27 1593 aaKnown RBP40.16■■■■■ 4.02
CD164-208ENST00000506649 KIF21AQ7Z4S6 1674 aa40.02■■■■■ 4
CD164-208ENST00000506649 RSF1Q96T23 1441 aaPredicted RBP39.99■■■■□ 3.99
CD164-208ENST00000506649 MRC2Q9UBG0 1479 aa39.83■■■■□ 3.97
CD164-208ENST00000506649 TOP2AP11388 1531 aaKnown RBP39.8■■■■□ 3.96
CD164-208ENST00000506649 CFTRP13569 1480 aa39.72■■■■□ 3.95
CD164-208ENST00000506649 WDR62O43379 1518 aa39.71■■■■□ 3.95
CD164-208ENST00000506649 CEP164Q9UPV0 1460 aa39.7■■■■□ 3.95
CD164-208ENST00000506649 FANCD2Q9BXW9 1451 aa39.66■■■■□ 3.94
CD164-208ENST00000506649 CCDC88BA6NC98 1476 aa39.33■■■■□ 3.89
CD164-208ENST00000506649 URB2Q14146 1524 aaKnown RBP39.28■■■■□ 3.88
CD164-208ENST00000506649 PRDM2Q13029 1718 aa39.23■■■■□ 3.87
CD164-208ENST00000506649 ABCC8Q09428 1581 aa38.95■■■■□ 3.83
CD164-208ENST00000506649 IFT140Q96RY7 1462 aa38.94■■■■□ 3.82
CD164-208ENST00000506649 OSCARQ8IYS5 282 aa38.94■■■■□ 3.82
CD164-208ENST00000506649 TOPBP1Q92547 1522 aa38.91■■■■□ 3.82
CD164-208ENST00000506649 DNMBPQ6XZF7 1577 aa38.79■■■■□ 3.8
CD164-208ENST00000506649 ZNF608Q9ULD9 1512 aaPredicted RBP38.75■■■■□ 3.79
CD164-208ENST00000506649 TRIM41Q8WV44 630 aa38.74■■■■□ 3.79
CD164-208ENST00000506649 EIF4G3O43432 1585 aaKnown RBP38.55■■■■□ 3.76
CD164-208ENST00000506649 POLA1P09884 1462 aaPredicted RBP38.52■■■■□ 3.76
CD164-208ENST00000506649 TARBP1Q13395 1621 aaKnown RBP38.52■■■■□ 3.76
CD164-208ENST00000506649 AQRO60306 1485 aaKnown RBP eCLIP38.45■■■■□ 3.753e-10■■■■□ 21.5
CD164-208ENST00000506649 SOGA1O94964 1423 aa38.39■■■■□ 3.74
CD164-208ENST00000506649 RAD54L2Q9Y4B4 1467 aa38.34■■■■□ 3.73
CD164-208ENST00000506649 SUPT5HO00267 1087 aaKnown RBP38.31■■■■□ 3.72
CD164-208ENST00000506649 FGD5Q6ZNL6 1462 aa38.29■■■■□ 3.72
CD164-208ENST00000506649 RIMBP3CA6NJZ7 1639 aa38.28■■■■□ 3.72
CD164-208ENST00000506649 RIMBP3BA6NNM3 1639 aa38.28■■■■□ 3.72
CD164-208ENST00000506649 RIMBP3Q9UFD9 1639 aa38.28■■■■□ 3.72
CD164-208ENST00000506649 WDR97A6NE52 1622 aa38.27■■■■□ 3.72
CD164-208ENST00000506649 CUX1P39880 1505 aa38.26■■■■□ 3.72
CD164-208ENST00000506649 TDRD9Q8NDG6 1382 aaKnown RBP38.25■■■■□ 3.71
CD164-208ENST00000506649 ARHGEF11O15085 1522 aa38.22■■■■□ 3.71
CD164-208ENST00000506649 FBLN2P98095 1184 aa38.19■■■■□ 3.7
CD164-208ENST00000506649 CHD1O14646 1710 aa38.18■■■■□ 3.7
CD164-208ENST00000506649 SNAPC4Q5SXM2 1469 aa38.07■■■■□ 3.68
CD164-208ENST00000506649 GRIN2BQ13224 1484 aa38.05■■■■□ 3.68
CD164-208ENST00000506649 MAGI1Q96QZ7 1491 aaPredicted RBP38.05■■■■□ 3.68
CD164-208ENST00000506649 CHMP7Q8WUX9 453 aaPredicted RBP38■■■■□ 3.67
CD164-208ENST00000506649 CYB5RLQ6IPT4 315 aa37.95■■■■□ 3.67
CD164-208ENST00000506649 ABCA10Q8WWZ4 1543 aa37.92■■■■□ 3.66
CD164-208ENST00000506649 GAPVD1Q14C86 1478 aa37.91■■■■□ 3.66
CD164-208ENST00000506649 SYNJ2O15056 1496 aa37.9■■■■□ 3.66
CD164-208ENST00000506649 SYNJ1O43426 1573 aa37.88■■■■□ 3.65
CD164-208ENST00000506649 ARAP1Q96P48 1450 aa37.84■■■■□ 3.65
CD164-208ENST00000506649 CLASP1Q7Z460 1538 aa37.83■■■■□ 3.65
CD164-208ENST00000506649 WRNQ14191 1432 aaPredicted RBP eCLIP37.83■■■■□ 3.65
CD164-208ENST00000506649 PBRM1Q86U86 1689 aa37.79■■■■□ 3.64
CD164-208ENST00000506649 ABCA5Q8WWZ7 1642 aa37.78■■■■□ 3.64
CD164-208ENST00000506649 TOP2BQ02880 1626 aa37.72■■■■□ 3.63
CD164-208ENST00000506649 BIVM-ERCC5R4GMW8 1640 aa37.7■■■■□ 3.63
CD164-208ENST00000506649 GRIN2AQ12879 1464 aa37.53■■■■□ 3.6
CD164-208ENST00000506649 TRHP20396 242 aaPredicted RBP37.49■■■■□ 3.59
CD164-208ENST00000506649 ADAMTS12P58397 1594 aa37.49■■■■□ 3.59
CD164-208ENST00000506649 FHAD1B1AJZ9 1412 aa37.48■■■■□ 3.59
CD164-208ENST00000506649 ERICH3Q5RHP9 1530 aa37.46■■■■□ 3.59
CD164-208ENST00000506649 NUP160Q12769 1436 aa37.42■■■■□ 3.58
CD164-208ENST00000506649 CEP170Q5SW79 1584 aa37.33■■■■□ 3.57
CD164-208ENST00000506649 SHROOM2Q13796 1616 aa37.19■■■■□ 3.54
CD164-208ENST00000506649 ERCC6L2Q5T890 1561 aa37.17■■■■□ 3.54
CD164-208ENST00000506649 KIF27Q86VH2 1401 aa37.06■■■■□ 3.52
CD164-208ENST00000506649 JPH4Q96JJ6 628 aa37.06■■■■□ 3.52
CD164-208ENST00000506649 PRG4Q92954 1404 aaPredicted RBP37.03■■■■□ 3.52
CD164-208ENST00000506649 IGF1RP08069 1367 aa37■■■■□ 3.51
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms