RNA–Protein interactions for RNA: ENST00000520109.1

TNFRSF10B-206, Transcript of TNF receptor superfamily member 10b, humanhuman

TSL 2

Gene TNFRSF10B, Length 674 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF10B-206ENST00000520109 NISCHQ9Y2I1 1504 aa47.32■■■■■ 5.17
TNFRSF10B-206ENST00000520109 CCDC180Q9P1Z9 1646 aa42.42■■■■■ 4.38
TNFRSF10B-206ENST00000520109 ABCC9O60706 1549 aa42.01■■■■■ 4.32
TNFRSF10B-206ENST00000520109 RB1CC1Q8TDY2 1594 aa40.28■■■■■ 4.04
TNFRSF10B-206ENST00000520109 NACADO15069 1562 aa40.08■■■■■ 4.01
TNFRSF10B-206ENST00000520109 DCAF8L2P0C7V8 631 aa39.85■■■■□ 3.97
TNFRSF10B-206ENST00000520109 MYO15BQ96JP2 1530 aa39.66■■■■□ 3.94
TNFRSF10B-206ENST00000520109 ZCCHC6Q5VYS8 1495 aaKnown RBP39.28■■■■□ 3.88
TNFRSF10B-206ENST00000520109 DCAF1Q9Y4B6 1507 aa39.21■■■■□ 3.87
TNFRSF10B-206ENST00000520109 PABPN1Q86U42 306 aaKnown RBP eCLIP39.12■■■■□ 3.85
TNFRSF10B-206ENST00000520109 UNC13AQ9UPW8 1703 aa39.11■■■■□ 3.85
TNFRSF10B-206ENST00000520109 DNAJC5BQ9UF47 199 aa38.99■■■■□ 3.83
TNFRSF10B-206ENST00000520109 BICRAQ9NZM4 1560 aa38.87■■■■□ 3.81
TNFRSF10B-206ENST00000520109 SHROOM4Q9ULL8 1493 aa38.73■■■■□ 3.79
TNFRSF10B-206ENST00000520109 SCRIBQ14160 1630 aa38.55■■■■□ 3.76
TNFRSF10B-206ENST00000520109 EIF4G1Q04637 1599 aaKnown RBP38.01■■■■□ 3.67
TNFRSF10B-206ENST00000520109 CC2D2AQ9P2K1 1620 aa37.99■■■■□ 3.67
TNFRSF10B-206ENST00000520109 CECR2Q9BXF3 1484 aa37.9■■■■□ 3.66
TNFRSF10B-206ENST00000520109 NCAPD3P42695 1498 aa36.94■■■■□ 3.5
TNFRSF10B-206ENST00000520109 SMARCA2P51531 1590 aa36.86■■■■□ 3.49
TNFRSF10B-206ENST00000520109 SMARCA4P51532 1647 aa36.84■■■■□ 3.49
TNFRSF10B-206ENST00000520109 ATAD2BQ9ULI0 1458 aa36.82■■■■□ 3.48
TNFRSF10B-206ENST00000520109 BAZ1AQ9NRL2 1556 aaPredicted RBP36.81■■■■□ 3.48
TNFRSF10B-206ENST00000520109 HMGXB3Q12766 1538 aa36.73■■■■□ 3.47
TNFRSF10B-206ENST00000520109 BAZ1BQ9UIG0 1483 aaKnown RBP36.56■■■■□ 3.44
TNFRSF10B-206ENST00000520109 PEG3Q9GZU2 1588 aa36.53■■■■□ 3.44
TNFRSF10B-206ENST00000520109 ERCC6Q03468 1493 aa36.43■■■■□ 3.42
TNFRSF10B-206ENST00000520109 MROH2BQ7Z745 1585 aa36.37■■■■□ 3.41
TNFRSF10B-206ENST00000520109 CUX2O14529 1486 aa36.28■■■■□ 3.4
TNFRSF10B-206ENST00000520109 LAMC3Q9Y6N6 1575 aa36.11■■■■□ 3.37
TNFRSF10B-206ENST00000520109 NESP48681 1621 aa36.09■■■■□ 3.37
TNFRSF10B-206ENST00000520109 PDS5BQ9NTI5 1447 aa35.95■■■■□ 3.35
TNFRSF10B-206ENST00000520109 WIZO95785 1651 aa35.93■■■■□ 3.34
TNFRSF10B-206ENST00000520109 CADPSQ9ULU8 1353 aa35.84■■■■□ 3.33
TNFRSF10B-206ENST00000520109 DNAJC5Q9H3Z4 198 aa35.83■■■■□ 3.33
TNFRSF10B-206ENST00000520109 RSF1Q96T23 1441 aaPredicted RBP35.77■■■■□ 3.32
TNFRSF10B-206ENST00000520109 THOC2Q8NI27 1593 aaKnown RBP35.75■■■■□ 3.31
TNFRSF10B-206ENST00000520109 KIF21AQ7Z4S6 1674 aa35.68■■■■□ 3.3
TNFRSF10B-206ENST00000520109 TOP2AP11388 1531 aaKnown RBP35.63■■■■□ 3.29
TNFRSF10B-206ENST00000520109 MRC2Q9UBG0 1479 aa35.54■■■■□ 3.28
TNFRSF10B-206ENST00000520109 CEP164Q9UPV0 1460 aa35.48■■■■□ 3.27
TNFRSF10B-206ENST00000520109 CFTRP13569 1480 aa35.47■■■■□ 3.27
TNFRSF10B-206ENST00000520109 FANCD2Q9BXW9 1451 aa35.41■■■■□ 3.26
TNFRSF10B-206ENST00000520109 WDR62O43379 1518 aa35.41■■■■□ 3.26
TNFRSF10B-206ENST00000520109 CCDC88BA6NC98 1476 aa35.16■■■■□ 3.22
TNFRSF10B-206ENST00000520109 PRDM2Q13029 1718 aa35.12■■■■□ 3.21
TNFRSF10B-206ENST00000520109 URB2Q14146 1524 aaKnown RBP35.01■■■■□ 3.19
TNFRSF10B-206ENST00000520109 ABCC8Q09428 1581 aa34.89■■■■□ 3.18
TNFRSF10B-206ENST00000520109 IFT140Q96RY7 1462 aa34.78■■■■□ 3.16
TNFRSF10B-206ENST00000520109 TOPBP1Q92547 1522 aa34.74■■■■□ 3.15
TNFRSF10B-206ENST00000520109 DNMBPQ6XZF7 1577 aa34.68■■■■□ 3.14
TNFRSF10B-206ENST00000520109 OSCARQ8IYS5 282 aa34.67■■■■□ 3.14
TNFRSF10B-206ENST00000520109 ZNF608Q9ULD9 1512 aaPredicted RBP34.5■■■■□ 3.11
TNFRSF10B-206ENST00000520109 SUPT5HO00267 1087 aaKnown RBP34.41■■■■□ 3.1
TNFRSF10B-206ENST00000520109 EIF4G3O43432 1585 aaKnown RBP34.4■■■■□ 3.1
TNFRSF10B-206ENST00000520109 POLA1P09884 1462 aaPredicted RBP34.39■■■■□ 3.1
TNFRSF10B-206ENST00000520109 TRIM41Q8WV44 630 aa34.36■■■■□ 3.09
TNFRSF10B-206ENST00000520109 TARBP1Q13395 1621 aaKnown RBP34.36■■■■□ 3.09
TNFRSF10B-206ENST00000520109 SOGA1O94964 1423 aa34.3■■■■□ 3.08
TNFRSF10B-206ENST00000520109 AQRO60306 1485 aaKnown RBP eCLIP34.27■■■■□ 3.085e-7■■■■■ 38.3
TNFRSF10B-206ENST00000520109 WDR97A6NE52 1622 aa34.26■■■■□ 3.08
TNFRSF10B-206ENST00000520109 FGD5Q6ZNL6 1462 aa34.22■■■■□ 3.07
TNFRSF10B-206ENST00000520109 RAD54L2Q9Y4B4 1467 aa34.19■■■■□ 3.06
TNFRSF10B-206ENST00000520109 CUX1P39880 1505 aa34.17■■■■□ 3.06
TNFRSF10B-206ENST00000520109 TDRD9Q8NDG6 1382 aaKnown RBP34.12■■■■□ 3.05
TNFRSF10B-206ENST00000520109 FBLN2P98095 1184 aa34.1■■■■□ 3.05
TNFRSF10B-206ENST00000520109 CHD1O14646 1710 aa34.04■■■■□ 3.04
TNFRSF10B-206ENST00000520109 RIMBP3CA6NJZ7 1639 aa34.03■■■■□ 3.04
TNFRSF10B-206ENST00000520109 RIMBP3BA6NNM3 1639 aa34.03■■■■□ 3.04
TNFRSF10B-206ENST00000520109 RIMBP3Q9UFD9 1639 aa34.03■■■■□ 3.04
TNFRSF10B-206ENST00000520109 GRIN2BQ13224 1484 aa34.01■■■■□ 3.03
TNFRSF10B-206ENST00000520109 MAGI1Q96QZ7 1491 aaPredicted RBP34.01■■■■□ 3.03
TNFRSF10B-206ENST00000520109 ARHGEF11O15085 1522 aa33.99■■■■□ 3.03
TNFRSF10B-206ENST00000520109 SNAPC4Q5SXM2 1469 aa33.98■■■■□ 3.03
TNFRSF10B-206ENST00000520109 CHMP7Q8WUX9 453 aaPredicted RBP33.95■■■■□ 3.03
TNFRSF10B-206ENST00000520109 ABCA10Q8WWZ4 1543 aa33.9■■■■□ 3.02
TNFRSF10B-206ENST00000520109 GAPVD1Q14C86 1478 aa33.89■■■■□ 3.02
TNFRSF10B-206ENST00000520109 WRNQ14191 1432 aaPredicted RBP eCLIP33.89■■■■□ 3.02
TNFRSF10B-206ENST00000520109 SYNJ2O15056 1496 aa33.86■■■■□ 3.01
TNFRSF10B-206ENST00000520109 SYNJ1O43426 1573 aa33.85■■■■□ 3.01
TNFRSF10B-206ENST00000520109 PBRM1Q86U86 1689 aa33.79■■■■□ 3
TNFRSF10B-206ENST00000520109 TOP2BQ02880 1626 aa33.79■■■■□ 3
TNFRSF10B-206ENST00000520109 BIVM-ERCC5R4GMW8 1640 aa33.77■■■■□ 3
TNFRSF10B-206ENST00000520109 ABCA5Q8WWZ7 1642 aa33.76■■■■□ 3
TNFRSF10B-206ENST00000520109 CYB5RLQ6IPT4 315 aa33.74■■■□□ 2.99
TNFRSF10B-206ENST00000520109 CLASP1Q7Z460 1538 aa33.7■■■□□ 2.99
TNFRSF10B-206ENST00000520109 ARAP1Q96P48 1450 aa33.63■■■□□ 2.97
TNFRSF10B-206ENST00000520109 GRIN2AQ12879 1464 aa33.53■■■□□ 2.96
TNFRSF10B-206ENST00000520109 ERICH3Q5RHP9 1530 aa33.53■■■□□ 2.96
TNFRSF10B-206ENST00000520109 FHAD1B1AJZ9 1412 aa33.52■■■□□ 2.96
TNFRSF10B-206ENST00000520109 ADAMTS12P58397 1594 aa33.51■■■□□ 2.95
TNFRSF10B-206ENST00000520109 NUP160Q12769 1436 aa33.38■■■□□ 2.93
TNFRSF10B-206ENST00000520109 TRHP20396 242 aaPredicted RBP33.37■■■□□ 2.93
TNFRSF10B-206ENST00000520109 CEP170Q5SW79 1584 aa33.3■■■□□ 2.92
TNFRSF10B-206ENST00000520109 KIF27Q86VH2 1401 aa33.24■■■□□ 2.91
TNFRSF10B-206ENST00000520109 SHROOM2Q13796 1616 aa33.17■■■□□ 2.9
TNFRSF10B-206ENST00000520109 CUL7Q14999 1698 aa33.1■■■□□ 2.89
TNFRSF10B-206ENST00000520109 JPH4Q96JJ6 628 aa33.08■■■□□ 2.89
TNFRSF10B-206ENST00000520109 PRG4Q92954 1404 aaPredicted RBP33.06■■■□□ 2.88
TNFRSF10B-206ENST00000520109 IGF1RP08069 1367 aa33.06■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 158 ms