RNA–Protein interactions for RNA: ENST00000523752.5

TNFRSF10B-208, Transcript of TNF receptor superfamily member 10b, humanhuman

TSL 1 (best)

Gene TNFRSF10B, Length 3,328 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF10B-208ENST00000523752 NISCHQ9Y2I1 1504 aa16.47■□□□□ 0.23
TNFRSF10B-208ENST00000523752 SHROOM4Q9ULL8 1493 aa14.2□□□□□ -0.14
TNFRSF10B-208ENST00000523752 ZCCHC6Q5VYS8 1495 aaKnown RBP13.95□□□□□ -0.18
TNFRSF10B-208ENST00000523752 CCDC180Q9P1Z9 1646 aa13.92□□□□□ -0.18
TNFRSF10B-208ENST00000523752 SUPT5HO00267 1087 aaKnown RBP13.92□□□□□ -0.18
TNFRSF10B-208ENST00000523752 DCAF8L2P0C7V8 631 aa13.67□□□□□ -0.22
TNFRSF10B-208ENST00000523752 MYO15BQ96JP2 1530 aa13.62□□□□□ -0.23
TNFRSF10B-208ENST00000523752 CHIC1Q5VXU3 224 aa13.55□□□□□ -0.24
TNFRSF10B-208ENST00000523752 DCAF1Q9Y4B6 1507 aa13.44□□□□□ -0.26
TNFRSF10B-208ENST00000523752 ABCC9O60706 1549 aa13.44□□□□□ -0.26
TNFRSF10B-208ENST00000523752 HRCP23327 699 aa13.27□□□□□ -0.29
TNFRSF10B-208ENST00000523752 PCGF6Q9BYE7 350 aa13.24□□□□□ -0.29
TNFRSF10B-208ENST00000523752 LOC105371045A0A1W2PR82 267 aa13.21□□□□□ -0.29
TNFRSF10B-208ENST00000523752 SCRIBQ14160 1630 aa13.17□□□□□ -0.3
TNFRSF10B-208ENST00000523752 PPARGC1BQ86YN6 1023 aaKnown RBP13.09□□□□□ -0.31
TNFRSF10B-208ENST00000523752 RSF1Q96T23 1441 aaPredicted RBP13.08□□□□□ -0.32
TNFRSF10B-208ENST00000523752 RB1CC1Q8TDY2 1594 aa13.02□□□□□ -0.32
TNFRSF10B-208ENST00000523752 DNAJC5BQ9UF47 199 aa12.92□□□□□ -0.34
TNFRSF10B-208ENST00000523752 TRIM41Q8WV44 630 aa12.9□□□□□ -0.34
TNFRSF10B-208ENST00000523752 CECR2Q9BXF3 1484 aa12.9□□□□□ -0.34
TNFRSF10B-208ENST00000523752 TRIM26Q12899 539 aaPredicted RBP12.9□□□□□ -0.34
TNFRSF10B-208ENST00000523752 FAM9AQ8IZU1 332 aaPredicted RBP12.88□□□□□ -0.35
TNFRSF10B-208ENST00000523752 MROH2BQ7Z745 1585 aa12.85□□□□□ -0.35
TNFRSF10B-208ENST00000523752 EHMT2Q96KQ7 1210 aa12.85□□□□□ -0.35
TNFRSF10B-208ENST00000523752 NACADO15069 1562 aa12.84□□□□□ -0.35
TNFRSF10B-208ENST00000523752 WIZO95785 1651 aa12.81□□□□□ -0.36
TNFRSF10B-208ENST00000523752 BAZ1AQ9NRL2 1556 aaPredicted RBP12.68□□□□□ -0.38
TNFRSF10B-208ENST00000523752 EIF4G1Q04637 1599 aaKnown RBP12.67□□□□□ -0.38
TNFRSF10B-208ENST00000523752 ZEB1P37275 1124 aaPredicted RBP12.57□□□□□ -0.4
TNFRSF10B-208ENST00000523752 ABCC8Q09428 1581 aa12.57□□□□□ -0.4
TNFRSF10B-208ENST00000523752 UNC13AQ9UPW8 1703 aa12.56□□□□□ -0.4
TNFRSF10B-208ENST00000523752 TOP2AP11388 1531 aaKnown RBP12.54□□□□□ -0.4
TNFRSF10B-208ENST00000523752 SMARCA4P51532 1647 aa12.54□□□□□ -0.4
TNFRSF10B-208ENST00000523752 CCDC88BA6NC98 1476 aa12.52□□□□□ -0.4
TNFRSF10B-208ENST00000523752 SMARCA2P51531 1590 aa12.51□□□□□ -0.41
TNFRSF10B-208ENST00000523752 PABPN1Q86U42 306 aaKnown RBP eCLIP12.45□□□□□ -0.42
TNFRSF10B-208ENST00000523752 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.45□□□□□ -0.42
TNFRSF10B-208ENST00000523752 SOGA1O94964 1423 aa12.44□□□□□ -0.42
TNFRSF10B-208ENST00000523752 TTBK1Q5TCY1 1321 aaPredicted RBP12.43□□□□□ -0.42
TNFRSF10B-208ENST00000523752 RUSC2Q8N2Y8 1516 aa12.41□□□□□ -0.42
TNFRSF10B-208ENST00000523752 CEP162Q5TB80 1403 aa12.4□□□□□ -0.43
TNFRSF10B-208ENST00000523752 CCER1Q8TC90 406 aaPredicted RBP12.37□□□□□ -0.43
TNFRSF10B-208ENST00000523752 WRNQ14191 1432 aaPredicted RBP eCLIP12.36□□□□□ -0.43
TNFRSF10B-208ENST00000523752 BICRAQ9NZM4 1560 aa12.36□□□□□ -0.43
TNFRSF10B-208ENST00000523752 SCAF1Q9H7N4 1312 aaKnown RBP12.33□□□□□ -0.44
TNFRSF10B-208ENST00000523752 TNIKQ9UKE5 1360 aa12.32□□□□□ -0.44
TNFRSF10B-208ENST00000523752 CSRNP3Q8WYN3 585 aa12.3□□□□□ -0.44
TNFRSF10B-208ENST00000523752 UBTFP17480 764 aaKnown RBP12.29□□□□□ -0.44
TNFRSF10B-208ENST00000523752 EEA1Q15075 1411 aa12.27□□□□□ -0.45
TNFRSF10B-208ENST00000523752 SYNJ1O43426 1573 aa12.26□□□□□ -0.45
TNFRSF10B-208ENST00000523752 PEG3Q9GZU2 1588 aa12.26□□□□□ -0.45
TNFRSF10B-208ENST00000523752 GOLGA3Q08378 1498 aa12.25□□□□□ -0.45
TNFRSF10B-208ENST00000523752 ATAD2BQ9ULI0 1458 aa12.18□□□□□ -0.46
TNFRSF10B-208ENST00000523752 DIEXFQ68CQ4 756 aaKnown RBP12.17□□□□□ -0.46
TNFRSF10B-208ENST00000523752 KIF21BO75037 1637 aa12.16□□□□□ -0.46
TNFRSF10B-208ENST00000523752 CEP164Q9UPV0 1460 aa12.16□□□□□ -0.46
TNFRSF10B-208ENST00000523752 NEUROD1Q13562 356 aa12.16□□□□□ -0.46
TNFRSF10B-208ENST00000523752 BAZ1BQ9UIG0 1483 aaKnown RBP12.15□□□□□ -0.46
TNFRSF10B-208ENST00000523752 DNAJC5Q9H3Z4 198 aa12.15□□□□□ -0.46
TNFRSF10B-208ENST00000523752 RAPGEF2Q9Y4G8 1499 aa12.13□□□□□ -0.47
TNFRSF10B-208ENST00000523752 CLIP1P30622 1438 aa12.13□□□□□ -0.47
TNFRSF10B-208ENST00000523752 ACIN1Q9UKV3 1341 aaKnown RBP12.12□□□□□ -0.47
TNFRSF10B-208ENST00000523752 RANGAP1P46060 587 aaPredicted RBP12.11□□□□□ -0.47
TNFRSF10B-208ENST00000523752 HNRNPUL2Q1KMD3 747 aaKnown RBP12.11□□□□□ -0.47
TNFRSF10B-208ENST00000523752 CC2D2AQ9P2K1 1620 aa12.1□□□□□ -0.47
TNFRSF10B-208ENST00000523752 VPS8Q8N3P4 1428 aa12.08□□□□□ -0.48
TNFRSF10B-208ENST00000523752 TOP2BQ02880 1626 aa12.06□□□□□ -0.48
TNFRSF10B-208ENST00000523752 ZNF316A6NFI3 1004 aaPredicted RBP12.04□□□□□ -0.48
TNFRSF10B-208ENST00000523752 GTF3C3Q9Y5Q9 886 aa12.02□□□□□ -0.49
TNFRSF10B-208ENST00000523752 BIVM-ERCC5R4GMW8 1640 aa12.01□□□□□ -0.49
TNFRSF10B-208ENST00000523752 CENPBP07199 599 aaPredicted RBP11.98□□□□□ -0.49
TNFRSF10B-208ENST00000523752 PELP1Q8IZL8 1130 aaKnown RBP11.98□□□□□ -0.49
TNFRSF10B-208ENST00000523752 APLP2Q06481 763 aa11.97□□□□□ -0.49
TNFRSF10B-208ENST00000523752 ARAP1Q96P48 1450 aa11.96□□□□□ -0.49
TNFRSF10B-208ENST00000523752 PRXQ9BXM0 1461 aa11.96□□□□□ -0.5
TNFRSF10B-208ENST00000523752 YTHDC1Q96MU7 727 aaKnown RBP11.95□□□□□ -0.5
TNFRSF10B-208ENST00000523752 CUX1P39880 1505 aa11.95□□□□□ -0.5
TNFRSF10B-208ENST00000523752 MIER1Q8N108 512 aa11.94□□□□□ -0.5
TNFRSF10B-208ENST00000523752 ERICH3Q5RHP9 1530 aa11.94□□□□□ -0.5
TNFRSF10B-208ENST00000523752 KANK4Q5T7N3 995 aaPredicted RBP11.92□□□□□ -0.5
TNFRSF10B-208ENST00000523752 HMGXB3Q12766 1538 aa11.9□□□□□ -0.5
TNFRSF10B-208ENST00000523752 MYT1Q01538 1121 aa11.9□□□□□ -0.5
TNFRSF10B-208ENST00000523752 NCAPD3P42695 1498 aa11.89□□□□□ -0.51
TNFRSF10B-208ENST00000523752 DHX57Q6P158 1386 aaKnown RBP11.87□□□□□ -0.51
TNFRSF10B-208ENST00000523752 KIF27Q86VH2 1401 aa11.85□□□□□ -0.51
TNFRSF10B-208ENST00000523752 CFTRP13569 1480 aa11.85□□□□□ -0.51
TNFRSF10B-208ENST00000523752 ARHGAP35Q9NRY4 1499 aa11.83□□□□□ -0.52
TNFRSF10B-208ENST00000523752 RRBP1Q9P2E9 1410 aaKnown RBP11.81□□□□□ -0.52
TNFRSF10B-208ENST00000523752 PRDM2Q13029 1718 aa11.77□□□□□ -0.53
TNFRSF10B-208ENST00000523752 ITGAEP38570 1179 aa11.76□□□□□ -0.53
TNFRSF10B-208ENST00000523752 CUX2O14529 1486 aa11.76□□□□□ -0.53
TNFRSF10B-208ENST00000523752 CLSPNQ9HAW4 1339 aa11.76□□□□□ -0.53
TNFRSF10B-208ENST00000523752 CCNB3Q8WWL7 1395 aa11.76□□□□□ -0.53
TNFRSF10B-208ENST00000523752 IGF1RP08069 1367 aa11.74□□□□□ -0.53
TNFRSF10B-208ENST00000523752 FGD5Q6ZNL6 1462 aa11.71□□□□□ -0.53
TNFRSF10B-208ENST00000523752 TIAM1Q13009 1591 aa11.71□□□□□ -0.54
TNFRSF10B-208ENST00000523752 RAB3GAP2Q9H2M9 1393 aa11.69□□□□□ -0.54
TNFRSF10B-208ENST00000523752 MAPKBP1O60336 1514 aa11.69□□□□□ -0.54
TNFRSF10B-208ENST00000523752 CARMIL1Q5VZK9 1371 aa11.68□□□□□ -0.54
TNFRSF10B-208ENST00000523752 CADPSQ9ULU8 1353 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms