RNA–Protein interactions for RNA: ENST00000310786.8

CD164-202, Transcript of CD164 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD164, Length 2,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD164-202ENST00000310786 NISCHQ9Y2I1 1504 aa20.86■□□□□ 0.93
CD164-202ENST00000310786 SHROOM4Q9ULL8 1493 aa17.99■□□□□ 0.47
CD164-202ENST00000310786 SUPT5HO00267 1087 aaKnown RBP17.68■□□□□ 0.42
CD164-202ENST00000310786 ZCCHC6Q5VYS8 1495 aaKnown RBP17.65■□□□□ 0.42
CD164-202ENST00000310786 CCDC180Q9P1Z9 1646 aa17.64■□□□□ 0.41
CD164-202ENST00000310786 DCAF8L2P0C7V8 631 aa17.45■□□□□ 0.38
CD164-202ENST00000310786 CHIC1Q5VXU3 224 aa17.16■□□□□ 0.34
CD164-202ENST00000310786 MYO15BQ96JP2 1530 aa17.13■□□□□ 0.33
CD164-202ENST00000310786 DCAF1Q9Y4B6 1507 aa17.04■□□□□ 0.32
CD164-202ENST00000310786 HRCP23327 699 aa16.78■□□□□ 0.28
CD164-202ENST00000310786 PCGF6Q9BYE7 350 aa16.78■□□□□ 0.28
CD164-202ENST00000310786 LOC105371045A0A1W2PR82 267 aa16.72■□□□□ 0.27
CD164-202ENST00000310786 ABCC9O60706 1549 aa16.67■□□□□ 0.26
CD164-202ENST00000310786 SCRIBQ14160 1630 aa16.66■□□□□ 0.26
CD164-202ENST00000310786 RSF1Q96T23 1441 aaPredicted RBP16.56■□□□□ 0.24
CD164-202ENST00000310786 PPARGC1BQ86YN6 1023 aaKnown RBP16.5■□□□□ 0.23
CD164-202ENST00000310786 TRIM41Q8WV44 630 aa16.43■□□□□ 0.22
CD164-202ENST00000310786 RB1CC1Q8TDY2 1594 aa16.42■□□□□ 0.22
CD164-202ENST00000310786 TRIM26Q12899 539 aaPredicted RBP16.38■□□□□ 0.21
CD164-202ENST00000310786 FAM9AQ8IZU1 332 aaPredicted RBP16.36■□□□□ 0.21
CD164-202ENST00000310786 NACADO15069 1562 aa16.31■□□□□ 0.2
CD164-202ENST00000310786 CECR2Q9BXF3 1484 aa16.31■□□□□ 0.2
CD164-202ENST00000310786 EHMT2Q96KQ7 1210 aa16.28■□□□□ 0.2
CD164-202ENST00000310786 MROH2BQ7Z745 1585 aa16.25■□□□□ 0.19
CD164-202ENST00000310786 WIZO95785 1651 aa16.18■□□□□ 0.18
CD164-202ENST00000310786 BAZ1AQ9NRL2 1556 aaPredicted RBP16.04■□□□□ 0.16
CD164-202ENST00000310786 ZEB1P37275 1124 aaPredicted RBP16.04■□□□□ 0.16
CD164-202ENST00000310786 EIF4G1Q04637 1599 aaKnown RBP15.93■□□□□ 0.14
CD164-202ENST00000310786 TOP2AP11388 1531 aaKnown RBP15.88■□□□□ 0.13
CD164-202ENST00000310786 ABCC8Q09428 1581 aa15.88■□□□□ 0.13
CD164-202ENST00000310786 SMARCA4P51532 1647 aa15.87■□□□□ 0.13
CD164-202ENST00000310786 CCDC88BA6NC98 1476 aa15.86■□□□□ 0.13
CD164-202ENST00000310786 UNC13AQ9UPW8 1703 aa15.82■□□□□ 0.12
CD164-202ENST00000310786 SMARCA2P51531 1590 aa15.81■□□□□ 0.12
CD164-202ENST00000310786 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.78■□□□□ 0.12
CD164-202ENST00000310786 TTBK1Q5TCY1 1321 aaPredicted RBP15.77■□□□□ 0.12
CD164-202ENST00000310786 PABPN1Q86U42 306 aaKnown RBP eCLIP15.75■□□□□ 0.11
CD164-202ENST00000310786 SOGA1O94964 1423 aa15.74■□□□□ 0.11
CD164-202ENST00000310786 CCER1Q8TC90 406 aaPredicted RBP15.73■□□□□ 0.11
CD164-202ENST00000310786 CEP162Q5TB80 1403 aa15.7■□□□□ 0.1
CD164-202ENST00000310786 RUSC2Q8N2Y8 1516 aa15.67■□□□□ 0.1
CD164-202ENST00000310786 UBTFP17480 764 aaKnown RBP15.66■□□□□ 0.1
CD164-202ENST00000310786 CSRNP3Q8WYN3 585 aa15.66■□□□□ 0.1
CD164-202ENST00000310786 WRNQ14191 1432 aaPredicted RBP eCLIP15.64■□□□□ 0.093e-7■■□□□ 13.1
CD164-202ENST00000310786 TNIKQ9UKE5 1360 aa15.63■□□□□ 0.09
CD164-202ENST00000310786 BICRAQ9NZM4 1560 aa15.62■□□□□ 0.09
CD164-202ENST00000310786 EEA1Q15075 1411 aa15.6■□□□□ 0.09
CD164-202ENST00000310786 SCAF1Q9H7N4 1312 aaKnown RBP15.54■□□□□ 0.08
CD164-202ENST00000310786 GOLGA3Q08378 1498 aa15.54■□□□□ 0.08
CD164-202ENST00000310786 PEG3Q9GZU2 1588 aa15.5■□□□□ 0.07
CD164-202ENST00000310786 SYNJ1O43426 1573 aa15.49■□□□□ 0.07
CD164-202ENST00000310786 ATAD2BQ9ULI0 1458 aa15.45■□□□□ 0.06
CD164-202ENST00000310786 DIEXFQ68CQ4 756 aaKnown RBP15.45■□□□□ 0.06
CD164-202ENST00000310786 BAZ1BQ9UIG0 1483 aaKnown RBP15.44■□□□□ 0.06
CD164-202ENST00000310786 CEP164Q9UPV0 1460 aa15.43■□□□□ 0.06
CD164-202ENST00000310786 RANGAP1P46060 587 aaPredicted RBP15.4■□□□□ 0.06
CD164-202ENST00000310786 CLIP1P30622 1438 aa15.39■□□□□ 0.05
CD164-202ENST00000310786 KIF21BO75037 1637 aa15.39■□□□□ 0.05
CD164-202ENST00000310786 HNRNPUL2Q1KMD3 747 aaKnown RBP15.38■□□□□ 0.05
CD164-202ENST00000310786 ACIN1Q9UKV3 1341 aaKnown RBP15.35■□□□□ 0.05
CD164-202ENST00000310786 NEUROD1Q13562 356 aa15.35■□□□□ 0.05
CD164-202ENST00000310786 RAPGEF2Q9Y4G8 1499 aa15.34■□□□□ 0.05
CD164-202ENST00000310786 APLP2Q06481 763 aa15.32■□□□□ 0.04
CD164-202ENST00000310786 VPS8Q8N3P4 1428 aa15.31■□□□□ 0.04
CD164-202ENST00000310786 ZNF316A6NFI3 1004 aaPredicted RBP15.29■□□□□ 0.04
CD164-202ENST00000310786 CENPBP07199 599 aaPredicted RBP15.26■□□□□ 0.03
CD164-202ENST00000310786 TOP2BQ02880 1626 aa15.26■□□□□ 0.03
CD164-202ENST00000310786 PELP1Q8IZL8 1130 aaKnown RBP15.24■□□□□ 0.03
CD164-202ENST00000310786 GTF3C3Q9Y5Q9 886 aa15.21■□□□□ 0.03
CD164-202ENST00000310786 BIVM-ERCC5R4GMW8 1640 aa15.18■□□□□ 0.02
CD164-202ENST00000310786 YTHDC1Q96MU7 727 aaKnown RBP15.16■□□□□ 0.02
CD164-202ENST00000310786 PRXQ9BXM0 1461 aa15.13■□□□□ 0.01
CD164-202ENST00000310786 ERICH3Q5RHP9 1530 aa15.12■□□□□ 0.01
CD164-202ENST00000310786 CUX1P39880 1505 aa15.12■□□□□ 0.01
CD164-202ENST00000310786 MIER1Q8N108 512 aa15.11■□□□□ 0.01
CD164-202ENST00000310786 ARAP1Q96P48 1450 aa15.11■□□□□ 0.01
CD164-202ENST00000310786 NCAPD3P42695 1498 aa15.11■□□□□ 0.01
CD164-202ENST00000310786 KANK4Q5T7N3 995 aaPredicted RBP15.1■□□□□ 0.01
CD164-202ENST00000310786 HMGXB3Q12766 1538 aa15.1■□□□□ 0.01
CD164-202ENST00000310786 KIF27Q86VH2 1401 aa15.07■□□□□ 0
CD164-202ENST00000310786 CFTRP13569 1480 aa15.03■□□□□ -0
CD164-202ENST00000310786 DHX57Q6P158 1386 aaKnown RBP15.01□□□□□ -0.01
CD164-202ENST00000310786 ITGAEP38570 1179 aa14.97□□□□□ -0.01
CD164-202ENST00000310786 ARHGAP35Q9NRY4 1499 aa14.97□□□□□ -0.01
CD164-202ENST00000310786 CLSPNQ9HAW4 1339 aa14.96□□□□□ -0.01
CD164-202ENST00000310786 RRBP1Q9P2E9 1410 aaKnown RBP14.94□□□□□ -0.02
CD164-202ENST00000310786 CUX2O14529 1486 aa14.94□□□□□ -0.02
CD164-202ENST00000310786 CCNB3Q8WWL7 1395 aa14.92□□□□□ -0.02
CD164-202ENST00000310786 IGF1RP08069 1367 aa14.9□□□□□ -0.02
CD164-202ENST00000310786 PRDM2Q13029 1718 aa14.87□□□□□ -0.03
CD164-202ENST00000310786 CADPSQ9ULU8 1353 aa14.86□□□□□ -0.03
CD164-202ENST00000310786 CARMIL1Q5VZK9 1371 aa14.85□□□□□ -0.03
CD164-202ENST00000310786 FGD5Q6ZNL6 1462 aa14.85□□□□□ -0.03
CD164-202ENST00000310786 P3H3Q8IVL6 736 aa14.82□□□□□ -0.04
CD164-202ENST00000310786 RAB3GAP2Q9H2M9 1393 aa14.81□□□□□ -0.04
CD164-202ENST00000310786 TIAM1Q13009 1591 aa14.81□□□□□ -0.04
CD164-202ENST00000310786 ATP1B4Q9UN42 357 aaPredicted RBP14.81□□□□□ -0.04
CD164-202ENST00000310786 FAM50AQ14320 339 aaKnown RBP14.78□□□□□ -0.04
CD164-202ENST00000310786 LRRC9Q6ZRR7 1453 aa14.77□□□□□ -0.05
CD164-202ENST00000310786 PHLDB1Q86UU1 1377 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms