Protein–RNA interactions for Protein: Q9Y5E4

PCDHB5, Protocadherin beta-5, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB5Q9Y5E4 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC26.46■■□□□ 1.83
PCDHB5Q9Y5E4 MOB2-207ENST00000614710 705 ntTSL 5 BASIC26.46■■□□□ 1.83
PCDHB5Q9Y5E4 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
PCDHB5Q9Y5E4 AC139426.1-201ENST00000568218 2529 ntBASIC26.46■■□□□ 1.83
PCDHB5Q9Y5E4 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC26.45■■□□□ 1.82
PCDHB5Q9Y5E4 AL157400.5-201ENST00000507624 621 ntBASIC26.45■■□□□ 1.82
PCDHB5Q9Y5E4 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
PCDHB5Q9Y5E4 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC26.45■■□□□ 1.82
PCDHB5Q9Y5E4 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC26.45■■□□□ 1.82
PCDHB5Q9Y5E4 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
PCDHB5Q9Y5E4 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
PCDHB5Q9Y5E4 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC26.43■■□□□ 1.82
PCDHB5Q9Y5E4 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
PCDHB5Q9Y5E4 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC26.43■■□□□ 1.82
PCDHB5Q9Y5E4 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC26.43■■□□□ 1.82
PCDHB5Q9Y5E4 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
PCDHB5Q9Y5E4 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC26.42■■□□□ 1.82
PCDHB5Q9Y5E4 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
PCDHB5Q9Y5E4 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC26.42■■□□□ 1.82
PCDHB5Q9Y5E4 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC26.42■■□□□ 1.82
PCDHB5Q9Y5E4 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
PCDHB5Q9Y5E4 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
PCDHB5Q9Y5E4 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC26.41■■□□□ 1.82
PCDHB5Q9Y5E4 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
PCDHB5Q9Y5E4 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC26.41■■□□□ 1.82
PCDHB5Q9Y5E4 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC26.41■■□□□ 1.82
PCDHB5Q9Y5E4 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC26.4■■□□□ 1.82
PCDHB5Q9Y5E4 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
PCDHB5Q9Y5E4 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
PCDHB5Q9Y5E4 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
PCDHB5Q9Y5E4 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC26.39■■□□□ 1.82
PCDHB5Q9Y5E4 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC26.39■■□□□ 1.82
PCDHB5Q9Y5E4 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC26.39■■□□□ 1.82
PCDHB5Q9Y5E4 NTF6A-201ENST00000591175 560 ntBASIC26.39■■□□□ 1.82
PCDHB5Q9Y5E4 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
PCDHB5Q9Y5E4 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
PCDHB5Q9Y5E4 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
PCDHB5Q9Y5E4 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC26.38■■□□□ 1.81
PCDHB5Q9Y5E4 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC26.38■■□□□ 1.81
PCDHB5Q9Y5E4 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC26.38■■□□□ 1.81
PCDHB5Q9Y5E4 HYI-213ENST00000583037 1322 ntTSL 5 BASIC26.38■■□□□ 1.81
PCDHB5Q9Y5E4 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC26.37■■□□□ 1.81
PCDHB5Q9Y5E4 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC26.37■■□□□ 1.81
PCDHB5Q9Y5E4 DRD5P2-201ENST00000421395 2012 ntBASIC26.36■■□□□ 1.81
PCDHB5Q9Y5E4 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC26.36■■□□□ 1.81
PCDHB5Q9Y5E4 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
PCDHB5Q9Y5E4 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
PCDHB5Q9Y5E4 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
PCDHB5Q9Y5E4 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC26.35■■□□□ 1.81
PCDHB5Q9Y5E4 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
PCDHB5Q9Y5E4 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC26.35■■□□□ 1.81
PCDHB5Q9Y5E4 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
PCDHB5Q9Y5E4 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC26.34■■□□□ 1.81
PCDHB5Q9Y5E4 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC26.34■■□□□ 1.81
PCDHB5Q9Y5E4 REST-210ENST00000638187 1334 ntTSL 5 BASIC26.34■■□□□ 1.81
PCDHB5Q9Y5E4 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
PCDHB5Q9Y5E4 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
PCDHB5Q9Y5E4 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC26.33■■□□□ 1.81
PCDHB5Q9Y5E4 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC26.32■■□□□ 1.8
PCDHB5Q9Y5E4 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
PCDHB5Q9Y5E4 U85056.1-201ENST00000616429 682 ntBASIC26.32■■□□□ 1.8
PCDHB5Q9Y5E4 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
PCDHB5Q9Y5E4 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
PCDHB5Q9Y5E4 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
PCDHB5Q9Y5E4 SMPD5-203ENST00000639008 1464 ntBASIC26.3■■□□□ 1.8
PCDHB5Q9Y5E4 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC26.3■■□□□ 1.8
PCDHB5Q9Y5E4 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC26.3■■□□□ 1.8
PCDHB5Q9Y5E4 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC26.3■■□□□ 1.8
PCDHB5Q9Y5E4 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
PCDHB5Q9Y5E4 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC26.3■■□□□ 1.8
PCDHB5Q9Y5E4 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
PCDHB5Q9Y5E4 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC26.29■■□□□ 1.8
PCDHB5Q9Y5E4 AC007029.1-201ENST00000604183 313 ntBASIC26.29■■□□□ 1.8
PCDHB5Q9Y5E4 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
PCDHB5Q9Y5E4 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
PCDHB5Q9Y5E4 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
PCDHB5Q9Y5E4 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
PCDHB5Q9Y5E4 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
PCDHB5Q9Y5E4 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
PCDHB5Q9Y5E4 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
PCDHB5Q9Y5E4 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC26.27■■□□□ 1.8
PCDHB5Q9Y5E4 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC26.27■■□□□ 1.8
PCDHB5Q9Y5E4 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
PCDHB5Q9Y5E4 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
PCDHB5Q9Y5E4 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC26.27■■□□□ 1.8
PCDHB5Q9Y5E4 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
PCDHB5Q9Y5E4 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC26.26■■□□□ 1.79
PCDHB5Q9Y5E4 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC26.26■■□□□ 1.79
PCDHB5Q9Y5E4 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
PCDHB5Q9Y5E4 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
PCDHB5Q9Y5E4 AC025884.2-201ENST00000553429 711 ntBASIC26.25■■□□□ 1.79
PCDHB5Q9Y5E4 WHAMMP3-201ENST00000611636 1609 ntBASIC26.25■■□□□ 1.79
PCDHB5Q9Y5E4 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
PCDHB5Q9Y5E4 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC26.24■■□□□ 1.79
PCDHB5Q9Y5E4 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
PCDHB5Q9Y5E4 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC26.23■■□□□ 1.79
PCDHB5Q9Y5E4 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
PCDHB5Q9Y5E4 AC012354.3-201ENST00000623734 483 ntBASIC26.23■■□□□ 1.79
PCDHB5Q9Y5E4 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
PCDHB5Q9Y5E4 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms