Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
MRPS28Q9Y2Q9 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
MRPS28Q9Y2Q9 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
MRPS28Q9Y2Q9 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC21.36■■□□□ 1.01
MRPS28Q9Y2Q9 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC21.36■■□□□ 1.01
MRPS28Q9Y2Q9 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
MRPS28Q9Y2Q9 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.36■■□□□ 1.01
MRPS28Q9Y2Q9 CIB2-204ENST00000557846 934 ntTSL 3 BASIC21.35■■□□□ 1.01
MRPS28Q9Y2Q9 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.35■■□□□ 1.01
MRPS28Q9Y2Q9 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.35■■□□□ 1.01
MRPS28Q9Y2Q9 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
MRPS28Q9Y2Q9 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.34■■□□□ 1.01
MRPS28Q9Y2Q9 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.34■■□□□ 1.01
MRPS28Q9Y2Q9 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
MRPS28Q9Y2Q9 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
MRPS28Q9Y2Q9 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
MRPS28Q9Y2Q9 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC21.33■■□□□ 1.01
MRPS28Q9Y2Q9 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC21.33■■□□□ 1.01
MRPS28Q9Y2Q9 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC21.33■■□□□ 1
MRPS28Q9Y2Q9 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1
MRPS28Q9Y2Q9 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.32■■□□□ 1
MRPS28Q9Y2Q9 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC21.32■■□□□ 1
MRPS28Q9Y2Q9 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
MRPS28Q9Y2Q9 AP004609.3-201ENST00000610705 1884 ntBASIC21.32■■□□□ 1
MRPS28Q9Y2Q9 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
MRPS28Q9Y2Q9 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.32■■□□□ 1
MRPS28Q9Y2Q9 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC21.31■■□□□ 1
MRPS28Q9Y2Q9 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
MRPS28Q9Y2Q9 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
MRPS28Q9Y2Q9 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
MRPS28Q9Y2Q9 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
MRPS28Q9Y2Q9 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
MRPS28Q9Y2Q9 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC21.31■■□□□ 1
MRPS28Q9Y2Q9 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC21.31■■□□□ 1
MRPS28Q9Y2Q9 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC21.31■■□□□ 1
MRPS28Q9Y2Q9 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
MRPS28Q9Y2Q9 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
MRPS28Q9Y2Q9 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
MRPS28Q9Y2Q9 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
MRPS28Q9Y2Q9 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
MRPS28Q9Y2Q9 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
MRPS28Q9Y2Q9 AP006261.1-201ENST00000584783 668 ntBASIC21.3■■□□□ 1
MRPS28Q9Y2Q9 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
MRPS28Q9Y2Q9 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
MRPS28Q9Y2Q9 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC21.29■■□□□ 1
MRPS28Q9Y2Q9 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
MRPS28Q9Y2Q9 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
MRPS28Q9Y2Q9 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
MRPS28Q9Y2Q9 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.28■■□□□ 1
MRPS28Q9Y2Q9 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.28■■□□□ 1
MRPS28Q9Y2Q9 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
MRPS28Q9Y2Q9 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC21.27■■□□□ 1
MRPS28Q9Y2Q9 AC110285.7-201ENST00000624417 1536 ntBASIC21.27■■□□□ 1
MRPS28Q9Y2Q9 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
MRPS28Q9Y2Q9 AC092803.2-201ENST00000564287 1899 ntBASIC21.26■□□□□ 0.99
MRPS28Q9Y2Q9 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC21.26■□□□□ 0.99
MRPS28Q9Y2Q9 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
MRPS28Q9Y2Q9 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.25■□□□□ 0.99
MRPS28Q9Y2Q9 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
MRPS28Q9Y2Q9 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
MRPS28Q9Y2Q9 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
MRPS28Q9Y2Q9 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
MRPS28Q9Y2Q9 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
MRPS28Q9Y2Q9 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC21.23■□□□□ 0.99
MRPS28Q9Y2Q9 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
MRPS28Q9Y2Q9 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC21.23■□□□□ 0.99
MRPS28Q9Y2Q9 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC21.23■□□□□ 0.99
MRPS28Q9Y2Q9 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
MRPS28Q9Y2Q9 AC087741.3-201ENST00000624270 1347 ntBASIC21.23■□□□□ 0.99
MRPS28Q9Y2Q9 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
MRPS28Q9Y2Q9 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
MRPS28Q9Y2Q9 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
MRPS28Q9Y2Q9 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC21.22■□□□□ 0.99
MRPS28Q9Y2Q9 DUSP8P4-201ENST00000399538 1761 ntBASIC21.22■□□□□ 0.99
MRPS28Q9Y2Q9 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
MRPS28Q9Y2Q9 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC21.21■□□□□ 0.99
MRPS28Q9Y2Q9 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
MRPS28Q9Y2Q9 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC21.21■□□□□ 0.99
MRPS28Q9Y2Q9 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
MRPS28Q9Y2Q9 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
MRPS28Q9Y2Q9 PEX7-203ENST00000541292 945 ntTSL 5 BASIC21.21■□□□□ 0.99
MRPS28Q9Y2Q9 AC020928.2-201ENST00000588717 2197 ntBASIC21.2■□□□□ 0.98
MRPS28Q9Y2Q9 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
MRPS28Q9Y2Q9 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC21.2■□□□□ 0.98
MRPS28Q9Y2Q9 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
MRPS28Q9Y2Q9 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
MRPS28Q9Y2Q9 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC21.2■□□□□ 0.98
MRPS28Q9Y2Q9 AC142472.1-201ENST00000612013 1741 ntBASIC21.2■□□□□ 0.98
MRPS28Q9Y2Q9 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
MRPS28Q9Y2Q9 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
MRPS28Q9Y2Q9 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
MRPS28Q9Y2Q9 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
MRPS28Q9Y2Q9 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.18■□□□□ 0.98
MRPS28Q9Y2Q9 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
MRPS28Q9Y2Q9 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC21.18■□□□□ 0.98
MRPS28Q9Y2Q9 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
MRPS28Q9Y2Q9 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.17■□□□□ 0.98
MRPS28Q9Y2Q9 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC21.17■□□□□ 0.98
MRPS28Q9Y2Q9 AC044849.2-201ENST00000606596 710 ntBASIC21.17■□□□□ 0.98
MRPS28Q9Y2Q9 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms