Protein–RNA interactions for Protein: Q9HAE3

EFCAB1, EF-hand calcium-binding domain-containing protein 1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB1Q9HAE3 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC23.88■■□□□ 1.41
EFCAB1Q9HAE3 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC23.87■■□□□ 1.41
EFCAB1Q9HAE3 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
EFCAB1Q9HAE3 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
EFCAB1Q9HAE3 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
EFCAB1Q9HAE3 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC23.87■■□□□ 1.41
EFCAB1Q9HAE3 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
EFCAB1Q9HAE3 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
EFCAB1Q9HAE3 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC23.86■■□□□ 1.41
EFCAB1Q9HAE3 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
EFCAB1Q9HAE3 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
EFCAB1Q9HAE3 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
EFCAB1Q9HAE3 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
EFCAB1Q9HAE3 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
EFCAB1Q9HAE3 SNAI3-AS1-204ENST00000567997 2048 ntBASIC23.85■■□□□ 1.41
EFCAB1Q9HAE3 AC093323.1-202ENST00000635031 2045 ntBASIC23.85■■□□□ 1.41
EFCAB1Q9HAE3 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC23.85■■□□□ 1.41
EFCAB1Q9HAE3 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC23.85■■□□□ 1.41
EFCAB1Q9HAE3 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
EFCAB1Q9HAE3 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
EFCAB1Q9HAE3 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
EFCAB1Q9HAE3 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC23.84■■□□□ 1.41
EFCAB1Q9HAE3 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
EFCAB1Q9HAE3 AP004609.3-201ENST00000610705 1884 ntBASIC23.84■■□□□ 1.41
EFCAB1Q9HAE3 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC23.84■■□□□ 1.41
EFCAB1Q9HAE3 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
EFCAB1Q9HAE3 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
EFCAB1Q9HAE3 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
EFCAB1Q9HAE3 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
EFCAB1Q9HAE3 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
EFCAB1Q9HAE3 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
EFCAB1Q9HAE3 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
EFCAB1Q9HAE3 WHAMMP2-203ENST00000563942 1603 ntBASIC23.82■■□□□ 1.4
EFCAB1Q9HAE3 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
EFCAB1Q9HAE3 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
EFCAB1Q9HAE3 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC23.82■■□□□ 1.4
EFCAB1Q9HAE3 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
EFCAB1Q9HAE3 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
EFCAB1Q9HAE3 CAHM-201ENST00000604200 896 ntBASIC23.81■■□□□ 1.4
EFCAB1Q9HAE3 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
EFCAB1Q9HAE3 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
EFCAB1Q9HAE3 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
EFCAB1Q9HAE3 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
EFCAB1Q9HAE3 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
EFCAB1Q9HAE3 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC23.8■■□□□ 1.4
EFCAB1Q9HAE3 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC23.8■■□□□ 1.4
EFCAB1Q9HAE3 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
EFCAB1Q9HAE3 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
EFCAB1Q9HAE3 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC23.79■■□□□ 1.4
EFCAB1Q9HAE3 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC23.79■■□□□ 1.4
EFCAB1Q9HAE3 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC23.79■■□□□ 1.4
EFCAB1Q9HAE3 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
EFCAB1Q9HAE3 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
EFCAB1Q9HAE3 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
EFCAB1Q9HAE3 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
EFCAB1Q9HAE3 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
EFCAB1Q9HAE3 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
EFCAB1Q9HAE3 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
EFCAB1Q9HAE3 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
EFCAB1Q9HAE3 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
EFCAB1Q9HAE3 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC23.78■■□□□ 1.4
EFCAB1Q9HAE3 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC23.78■■□□□ 1.4
EFCAB1Q9HAE3 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
EFCAB1Q9HAE3 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
EFCAB1Q9HAE3 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC23.77■■□□□ 1.4
EFCAB1Q9HAE3 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
EFCAB1Q9HAE3 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
EFCAB1Q9HAE3 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
EFCAB1Q9HAE3 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
EFCAB1Q9HAE3 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC23.76■■□□□ 1.39
EFCAB1Q9HAE3 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC23.76■■□□□ 1.39
EFCAB1Q9HAE3 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC23.75■■□□□ 1.39
EFCAB1Q9HAE3 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
EFCAB1Q9HAE3 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC23.75■■□□□ 1.39
EFCAB1Q9HAE3 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
EFCAB1Q9HAE3 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
EFCAB1Q9HAE3 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
EFCAB1Q9HAE3 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
EFCAB1Q9HAE3 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
EFCAB1Q9HAE3 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC23.74■■□□□ 1.39
EFCAB1Q9HAE3 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
EFCAB1Q9HAE3 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC23.73■■□□□ 1.39
EFCAB1Q9HAE3 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
EFCAB1Q9HAE3 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
EFCAB1Q9HAE3 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
EFCAB1Q9HAE3 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC23.72■■□□□ 1.39
EFCAB1Q9HAE3 CEBPA-AS1-201ENST00000592982 2198 ntBASIC23.72■■□□□ 1.39
EFCAB1Q9HAE3 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC23.72■■□□□ 1.39
EFCAB1Q9HAE3 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
EFCAB1Q9HAE3 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC23.71■■□□□ 1.39
EFCAB1Q9HAE3 RPS2-209ENST00000529806 993 ntTSL 3 BASIC23.71■■□□□ 1.39
EFCAB1Q9HAE3 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC23.71■■□□□ 1.39
EFCAB1Q9HAE3 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
EFCAB1Q9HAE3 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
EFCAB1Q9HAE3 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
EFCAB1Q9HAE3 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC23.7■■□□□ 1.38
EFCAB1Q9HAE3 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC23.69■■□□□ 1.38
EFCAB1Q9HAE3 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
EFCAB1Q9HAE3 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
EFCAB1Q9HAE3 MIR762-201ENST00000390236 83 ntBASIC23.69■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms