Protein–RNA interactions for Protein: Q9BW27

NUP85, Nuclear pore complex protein Nup85, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85Q9BW27 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
NUP85Q9BW27 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
NUP85Q9BW27 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC26.34■■□□□ 1.81
NUP85Q9BW27 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
NUP85Q9BW27 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC26.34■■□□□ 1.81
NUP85Q9BW27 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
NUP85Q9BW27 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
NUP85Q9BW27 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC26.33■■□□□ 1.81
NUP85Q9BW27 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
NUP85Q9BW27 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
NUP85Q9BW27 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC26.33■■□□□ 1.81
NUP85Q9BW27 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.81
NUP85Q9BW27 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC26.33■■□□□ 1.8
NUP85Q9BW27 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC26.32■■□□□ 1.8
NUP85Q9BW27 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC26.32■■□□□ 1.8
NUP85Q9BW27 AL449106.1-201ENST00000608517 1980 ntBASIC26.32■■□□□ 1.8
NUP85Q9BW27 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
NUP85Q9BW27 SHF-207ENST00000560540 2062 ntTSL 5 BASIC26.32■■□□□ 1.8
NUP85Q9BW27 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
NUP85Q9BW27 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC26.31■■□□□ 1.8
NUP85Q9BW27 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC26.31■■□□□ 1.8
NUP85Q9BW27 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC26.31■■□□□ 1.8
NUP85Q9BW27 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
NUP85Q9BW27 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC26.31■■□□□ 1.8
NUP85Q9BW27 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC26.3■■□□□ 1.8
NUP85Q9BW27 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
NUP85Q9BW27 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC26.3■■□□□ 1.8
NUP85Q9BW27 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
NUP85Q9BW27 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC26.28■■□□□ 1.8
NUP85Q9BW27 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
NUP85Q9BW27 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC26.28■■□□□ 1.8
NUP85Q9BW27 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
NUP85Q9BW27 LINC01971-201ENST00000617888 1048 ntBASIC26.27■■□□□ 1.8
NUP85Q9BW27 CHML-204ENST00000638121 920 ntTSL 2 BASIC26.27■■□□□ 1.8
NUP85Q9BW27 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
NUP85Q9BW27 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
NUP85Q9BW27 RPS2-210ENST00000530225 765 ntTSL 2 BASIC26.26■■□□□ 1.79
NUP85Q9BW27 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC26.26■■□□□ 1.79
NUP85Q9BW27 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
NUP85Q9BW27 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
NUP85Q9BW27 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
NUP85Q9BW27 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
NUP85Q9BW27 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
NUP85Q9BW27 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
NUP85Q9BW27 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
NUP85Q9BW27 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC26.24■■□□□ 1.79
NUP85Q9BW27 AP004609.3-201ENST00000610705 1884 ntBASIC26.24■■□□□ 1.79
NUP85Q9BW27 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC26.24■■□□□ 1.79
NUP85Q9BW27 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC26.24■■□□□ 1.79
NUP85Q9BW27 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC26.23■■□□□ 1.79
NUP85Q9BW27 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC26.23■■□□□ 1.79
NUP85Q9BW27 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
NUP85Q9BW27 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC26.22■■□□□ 1.79
NUP85Q9BW27 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
NUP85Q9BW27 WHAMMP3-201ENST00000611636 1609 ntBASIC26.21■■□□□ 1.79
NUP85Q9BW27 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC26.21■■□□□ 1.79
NUP85Q9BW27 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC26.21■■□□□ 1.79
NUP85Q9BW27 AC091060.1-201ENST00000623524 1766 ntBASIC26.2■■□□□ 1.79
NUP85Q9BW27 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC26.2■■□□□ 1.79
NUP85Q9BW27 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC26.2■■□□□ 1.78
NUP85Q9BW27 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.78
NUP85Q9BW27 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC26.19■■□□□ 1.78
NUP85Q9BW27 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
NUP85Q9BW27 DUX4L13-201ENST00000554103 1267 ntBASIC26.18■■□□□ 1.78
NUP85Q9BW27 DUX4L15-201ENST00000611059 1267 ntBASIC26.18■■□□□ 1.78
NUP85Q9BW27 DUX4L23-201ENST00000615195 1269 ntBASIC26.18■■□□□ 1.78
NUP85Q9BW27 DUX4L24-201ENST00000617576 1269 ntBASIC26.18■■□□□ 1.78
NUP85Q9BW27 DUX4L22-201ENST00000618238 1269 ntBASIC26.18■■□□□ 1.78
NUP85Q9BW27 DUX4L20-201ENST00000619712 1269 ntBASIC26.18■■□□□ 1.78
NUP85Q9BW27 DUX4L21-201ENST00000622058 1269 ntBASIC26.18■■□□□ 1.78
NUP85Q9BW27 DUX4L10-201ENST00000622460 1267 ntBASIC26.18■■□□□ 1.78
NUP85Q9BW27 DUX4L25-201ENST00000624915 1269 ntBASIC26.18■■□□□ 1.78
NUP85Q9BW27 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
NUP85Q9BW27 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
NUP85Q9BW27 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
NUP85Q9BW27 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
NUP85Q9BW27 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC26.16■■□□□ 1.78
NUP85Q9BW27 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC26.16■■□□□ 1.78
NUP85Q9BW27 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
NUP85Q9BW27 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC26.15■■□□□ 1.78
NUP85Q9BW27 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC26.15■■□□□ 1.78
NUP85Q9BW27 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC26.14■■□□□ 1.78
NUP85Q9BW27 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
NUP85Q9BW27 CHST11-202ENST00000546689 756 ntTSL 2 BASIC26.14■■□□□ 1.78
NUP85Q9BW27 DUX4L11-201ENST00000611504 1267 ntBASIC26.14■■□□□ 1.78
NUP85Q9BW27 DUX4L12-201ENST00000614593 1267 ntBASIC26.14■■□□□ 1.78
NUP85Q9BW27 DUX4L14-201ENST00000621227 1267 ntBASIC26.14■■□□□ 1.78
NUP85Q9BW27 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC26.14■■□□□ 1.77
NUP85Q9BW27 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
NUP85Q9BW27 MLEC-202ENST00000412616 841 ntTSL 3 BASIC26.13■■□□□ 1.77
NUP85Q9BW27 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
NUP85Q9BW27 AC142472.1-201ENST00000612013 1741 ntBASIC26.13■■□□□ 1.77
NUP85Q9BW27 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC26.12■■□□□ 1.77
NUP85Q9BW27 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC26.12■■□□□ 1.77
NUP85Q9BW27 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
NUP85Q9BW27 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC26.11■■□□□ 1.77
NUP85Q9BW27 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC26.11■■□□□ 1.77
NUP85Q9BW27 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
NUP85Q9BW27 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
NUP85Q9BW27 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms