Protein–RNA interactions for Protein: Q96QU1

PCDH15, Protocadherin-15, humanhuman

Predictions only

Length 1,955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15Q96QU1 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC24.76■■□□□ 1.55
PCDH15Q96QU1 DUX4L18-201ENST00000553347 1267 ntBASIC24.76■■□□□ 1.55
PCDH15Q96QU1 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
PCDH15Q96QU1 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC24.76■■□□□ 1.55
PCDH15Q96QU1 DUX4L9-201ENST00000449051 1259 ntBASIC24.75■■□□□ 1.55
PCDH15Q96QU1 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC24.75■■□□□ 1.55
PCDH15Q96QU1 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC24.74■■□□□ 1.55
PCDH15Q96QU1 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC24.74■■□□□ 1.55
PCDH15Q96QU1 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC24.74■■□□□ 1.55
PCDH15Q96QU1 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC24.74■■□□□ 1.55
PCDH15Q96QU1 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
PCDH15Q96QU1 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
PCDH15Q96QU1 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
PCDH15Q96QU1 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
PCDH15Q96QU1 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC24.73■■□□□ 1.55
PCDH15Q96QU1 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
PCDH15Q96QU1 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC24.73■■□□□ 1.55
PCDH15Q96QU1 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC24.72■■□□□ 1.55
PCDH15Q96QU1 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC24.72■■□□□ 1.55
PCDH15Q96QU1 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC24.72■■□□□ 1.55
PCDH15Q96QU1 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC24.72■■□□□ 1.55
PCDH15Q96QU1 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC24.71■■□□□ 1.55
PCDH15Q96QU1 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
PCDH15Q96QU1 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC24.71■■□□□ 1.55
PCDH15Q96QU1 RAP2CP1-202ENST00000605179 643 ntBASIC24.71■■□□□ 1.55
PCDH15Q96QU1 AC026202.3-201ENST00000600805 1127 ntBASIC24.7■■□□□ 1.54
PCDH15Q96QU1 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
PCDH15Q96QU1 SPCS2P3-201ENST00000500401 656 ntBASIC24.69■■□□□ 1.54
PCDH15Q96QU1 AC093536.1-201ENST00000569153 554 ntBASIC24.69■■□□□ 1.54
PCDH15Q96QU1 SMPD5-203ENST00000639008 1464 ntBASIC24.69■■□□□ 1.54
PCDH15Q96QU1 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC24.69■■□□□ 1.54
PCDH15Q96QU1 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC24.69■■□□□ 1.54
PCDH15Q96QU1 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
PCDH15Q96QU1 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC24.68■■□□□ 1.54
PCDH15Q96QU1 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC24.68■■□□□ 1.54
PCDH15Q96QU1 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
PCDH15Q96QU1 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PCDH15Q96QU1 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PCDH15Q96QU1 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC24.67■■□□□ 1.54
PCDH15Q96QU1 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PCDH15Q96QU1 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC24.67■■□□□ 1.54
PCDH15Q96QU1 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PCDH15Q96QU1 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC24.67■■□□□ 1.54
PCDH15Q96QU1 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
PCDH15Q96QU1 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC24.67■■□□□ 1.54
PCDH15Q96QU1 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC24.66■■□□□ 1.54
PCDH15Q96QU1 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
PCDH15Q96QU1 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC24.66■■□□□ 1.54
PCDH15Q96QU1 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC24.65■■□□□ 1.54
PCDH15Q96QU1 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
PCDH15Q96QU1 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC24.65■■□□□ 1.54
PCDH15Q96QU1 AC009299.2-201ENST00000482477 511 ntBASIC24.65■■□□□ 1.54
PCDH15Q96QU1 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC24.65■■□□□ 1.54
PCDH15Q96QU1 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC24.65■■□□□ 1.54
PCDH15Q96QU1 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC24.65■■□□□ 1.54
PCDH15Q96QU1 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
PCDH15Q96QU1 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PCDH15Q96QU1 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC24.65■■□□□ 1.54
PCDH15Q96QU1 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC24.64■■□□□ 1.54
PCDH15Q96QU1 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC24.64■■□□□ 1.54
PCDH15Q96QU1 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
PCDH15Q96QU1 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC24.64■■□□□ 1.53
PCDH15Q96QU1 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
PCDH15Q96QU1 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
PCDH15Q96QU1 BEX3-202ENST00000372634 753 ntTSL 2 BASIC24.63■■□□□ 1.53
PCDH15Q96QU1 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC24.63■■□□□ 1.53
PCDH15Q96QU1 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC24.63■■□□□ 1.53
PCDH15Q96QU1 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC24.63■■□□□ 1.53
PCDH15Q96QU1 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PCDH15Q96QU1 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
PCDH15Q96QU1 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
PCDH15Q96QU1 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
PCDH15Q96QU1 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC24.61■■□□□ 1.53
PCDH15Q96QU1 AC100797.4-201ENST00000631653 1827 ntBASIC24.61■■□□□ 1.53
PCDH15Q96QU1 AL359258.2-201ENST00000564063 1566 ntBASIC24.61■■□□□ 1.53
PCDH15Q96QU1 AP004833.2-201ENST00000532228 1454 ntBASIC24.61■■□□□ 1.53
PCDH15Q96QU1 AL592295.1-201ENST00000400984 884 ntBASIC24.61■■□□□ 1.53
PCDH15Q96QU1 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
PCDH15Q96QU1 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC24.6■■□□□ 1.53
PCDH15Q96QU1 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC24.6■■□□□ 1.53
PCDH15Q96QU1 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC24.6■■□□□ 1.53
PCDH15Q96QU1 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC24.6■■□□□ 1.53
PCDH15Q96QU1 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC24.6■■□□□ 1.53
PCDH15Q96QU1 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
PCDH15Q96QU1 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC24.59■■□□□ 1.53
PCDH15Q96QU1 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
PCDH15Q96QU1 RP9P-202ENST00000450133 1212 ntBASIC24.59■■□□□ 1.53
PCDH15Q96QU1 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC24.59■■□□□ 1.53
PCDH15Q96QU1 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
PCDH15Q96QU1 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
PCDH15Q96QU1 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC24.58■■□□□ 1.53
PCDH15Q96QU1 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
PCDH15Q96QU1 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
PCDH15Q96QU1 AC010980.1-201ENST00000587192 1142 ntBASIC24.57■■□□□ 1.52
PCDH15Q96QU1 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
PCDH15Q96QU1 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC24.56■■□□□ 1.52
PCDH15Q96QU1 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC24.56■■□□□ 1.52
PCDH15Q96QU1 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
PCDH15Q96QU1 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC24.56■■□□□ 1.52
PCDH15Q96QU1 AC019069.1-201ENST00000610008 1333 ntBASIC24.56■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 13 ms