Protein–RNA interactions for Protein: Q96EL3

MRPL53, 39S ribosomal protein L53, mitochondrial, humanhuman

Known RBP Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL53Q96EL3 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
MRPL53Q96EL3 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
MRPL53Q96EL3 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
MRPL53Q96EL3 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC18.69■□□□□ 0.58
MRPL53Q96EL3 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
MRPL53Q96EL3 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC18.68■□□□□ 0.58
MRPL53Q96EL3 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC18.68■□□□□ 0.58
MRPL53Q96EL3 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC18.68■□□□□ 0.58
MRPL53Q96EL3 NRG1-221ENST00000614767 762 ntTSL 5 BASIC18.68■□□□□ 0.58
MRPL53Q96EL3 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MRPL53Q96EL3 AP004609.3-201ENST00000610705 1884 ntBASIC18.68■□□□□ 0.58
MRPL53Q96EL3 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
MRPL53Q96EL3 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
MRPL53Q96EL3 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC18.67■□□□□ 0.58
MRPL53Q96EL3 AL162393.1-201ENST00000437852 946 ntBASIC18.67■□□□□ 0.58
MRPL53Q96EL3 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
MRPL53Q96EL3 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
MRPL53Q96EL3 BOD1-206ENST00000480951 814 ntTSL 2 BASIC18.66■□□□□ 0.58
MRPL53Q96EL3 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
MRPL53Q96EL3 AC142472.1-201ENST00000612013 1741 ntBASIC18.66■□□□□ 0.58
MRPL53Q96EL3 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MRPL53Q96EL3 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MRPL53Q96EL3 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC18.65■□□□□ 0.58
MRPL53Q96EL3 WHAMMP3-201ENST00000611636 1609 ntBASIC18.64■□□□□ 0.57
MRPL53Q96EL3 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MRPL53Q96EL3 DUSP8P4-201ENST00000399538 1761 ntBASIC18.64■□□□□ 0.57
MRPL53Q96EL3 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MRPL53Q96EL3 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC18.64■□□□□ 0.57
MRPL53Q96EL3 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC18.64■□□□□ 0.57
MRPL53Q96EL3 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
MRPL53Q96EL3 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
MRPL53Q96EL3 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MRPL53Q96EL3 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MRPL53Q96EL3 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MRPL53Q96EL3 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
MRPL53Q96EL3 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
MRPL53Q96EL3 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MRPL53Q96EL3 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MRPL53Q96EL3 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC18.62■□□□□ 0.57
MRPL53Q96EL3 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
MRPL53Q96EL3 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
MRPL53Q96EL3 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
MRPL53Q96EL3 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
MRPL53Q96EL3 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
MRPL53Q96EL3 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MRPL53Q96EL3 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MRPL53Q96EL3 AC092803.2-201ENST00000564287 1899 ntBASIC18.62■□□□□ 0.57
MRPL53Q96EL3 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
MRPL53Q96EL3 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MRPL53Q96EL3 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MRPL53Q96EL3 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
MRPL53Q96EL3 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MRPL53Q96EL3 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
MRPL53Q96EL3 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
MRPL53Q96EL3 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC18.6■□□□□ 0.57
MRPL53Q96EL3 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
MRPL53Q96EL3 RPS2-210ENST00000530225 765 ntTSL 2 BASIC18.6■□□□□ 0.57
MRPL53Q96EL3 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC18.59■□□□□ 0.57
MRPL53Q96EL3 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC18.59■□□□□ 0.57
MRPL53Q96EL3 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
MRPL53Q96EL3 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC18.59■□□□□ 0.57
MRPL53Q96EL3 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC18.59■□□□□ 0.57
MRPL53Q96EL3 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
MRPL53Q96EL3 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
MRPL53Q96EL3 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
MRPL53Q96EL3 DUX4L29-201ENST00000425409 679 ntBASIC18.58■□□□□ 0.56
MRPL53Q96EL3 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
MRPL53Q96EL3 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC18.58■□□□□ 0.56
MRPL53Q96EL3 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
MRPL53Q96EL3 AC021231.2-201ENST00000594613 730 ntBASIC18.58■□□□□ 0.56
MRPL53Q96EL3 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
MRPL53Q96EL3 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
MRPL53Q96EL3 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC18.57■□□□□ 0.56
MRPL53Q96EL3 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
MRPL53Q96EL3 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
MRPL53Q96EL3 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC18.57■□□□□ 0.56
MRPL53Q96EL3 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC18.57■□□□□ 0.56
MRPL53Q96EL3 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC18.56■□□□□ 0.56
MRPL53Q96EL3 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
MRPL53Q96EL3 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC18.56■□□□□ 0.56
MRPL53Q96EL3 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC18.56■□□□□ 0.56
MRPL53Q96EL3 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
MRPL53Q96EL3 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
MRPL53Q96EL3 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC18.55■□□□□ 0.56
MRPL53Q96EL3 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
MRPL53Q96EL3 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MRPL53Q96EL3 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC18.55■□□□□ 0.56
MRPL53Q96EL3 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
MRPL53Q96EL3 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MRPL53Q96EL3 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MRPL53Q96EL3 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC18.54■□□□□ 0.56
MRPL53Q96EL3 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
MRPL53Q96EL3 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
MRPL53Q96EL3 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
MRPL53Q96EL3 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MRPL53Q96EL3 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
MRPL53Q96EL3 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
MRPL53Q96EL3 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC18.53■□□□□ 0.56
MRPL53Q96EL3 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
MRPL53Q96EL3 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms