Protein–RNA interactions for Protein: Q8WZ73

RFFL, E3 ubiquitin-protein ligase rififylin, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFFLQ8WZ73 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
RFFLQ8WZ73 BOD1-206ENST00000480951 814 ntTSL 2 BASIC26.49■■□□□ 1.83
RFFLQ8WZ73 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC26.49■■□□□ 1.83
RFFLQ8WZ73 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC26.49■■□□□ 1.83
RFFLQ8WZ73 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC26.49■■□□□ 1.83
RFFLQ8WZ73 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC26.48■■□□□ 1.83
RFFLQ8WZ73 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC26.47■■□□□ 1.83
RFFLQ8WZ73 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC26.46■■□□□ 1.83
RFFLQ8WZ73 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC26.46■■□□□ 1.83
RFFLQ8WZ73 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
RFFLQ8WZ73 ZNRF2P2-203ENST00000454624 420 ntBASIC26.46■■□□□ 1.83
RFFLQ8WZ73 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC26.46■■□□□ 1.83
RFFLQ8WZ73 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
RFFLQ8WZ73 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
RFFLQ8WZ73 AC110285.7-201ENST00000624417 1536 ntBASIC26.44■■□□□ 1.82
RFFLQ8WZ73 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
RFFLQ8WZ73 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC26.44■■□□□ 1.82
RFFLQ8WZ73 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC26.44■■□□□ 1.82
RFFLQ8WZ73 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
RFFLQ8WZ73 AC091060.1-201ENST00000623524 1766 ntBASIC26.43■■□□□ 1.82
RFFLQ8WZ73 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC26.43■■□□□ 1.82
RFFLQ8WZ73 PEX7-203ENST00000541292 945 ntTSL 5 BASIC26.43■■□□□ 1.82
RFFLQ8WZ73 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
RFFLQ8WZ73 AL449106.1-201ENST00000608517 1980 ntBASIC26.42■■□□□ 1.82
RFFLQ8WZ73 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
RFFLQ8WZ73 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC26.41■■□□□ 1.82
RFFLQ8WZ73 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
RFFLQ8WZ73 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.82
RFFLQ8WZ73 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.82
RFFLQ8WZ73 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.82
RFFLQ8WZ73 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.81
RFFLQ8WZ73 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
RFFLQ8WZ73 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC26.38■■□□□ 1.81
RFFLQ8WZ73 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
RFFLQ8WZ73 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC26.38■■□□□ 1.81
RFFLQ8WZ73 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC26.37■■□□□ 1.81
RFFLQ8WZ73 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
RFFLQ8WZ73 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
RFFLQ8WZ73 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
RFFLQ8WZ73 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC26.37■■□□□ 1.81
RFFLQ8WZ73 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
RFFLQ8WZ73 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
RFFLQ8WZ73 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC26.36■■□□□ 1.81
RFFLQ8WZ73 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC26.36■■□□□ 1.81
RFFLQ8WZ73 HGH1-207ENST00000628266 258 ntTSL 5 BASIC26.36■■□□□ 1.81
RFFLQ8WZ73 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC26.36■■□□□ 1.81
RFFLQ8WZ73 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC26.36■■□□□ 1.81
RFFLQ8WZ73 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
RFFLQ8WZ73 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
RFFLQ8WZ73 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC26.35■■□□□ 1.81
RFFLQ8WZ73 AC021231.2-201ENST00000594613 730 ntBASIC26.35■■□□□ 1.81
RFFLQ8WZ73 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC26.35■■□□□ 1.81
RFFLQ8WZ73 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC26.35■■□□□ 1.81
RFFLQ8WZ73 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC26.34■■□□□ 1.81
RFFLQ8WZ73 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
RFFLQ8WZ73 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
RFFLQ8WZ73 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
RFFLQ8WZ73 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC26.34■■□□□ 1.81
RFFLQ8WZ73 AP004609.3-201ENST00000610705 1884 ntBASIC26.34■■□□□ 1.81
RFFLQ8WZ73 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
RFFLQ8WZ73 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC26.33■■□□□ 1.81
RFFLQ8WZ73 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
RFFLQ8WZ73 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
RFFLQ8WZ73 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC26.33■■□□□ 1.81
RFFLQ8WZ73 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC26.32■■□□□ 1.8
RFFLQ8WZ73 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC26.32■■□□□ 1.8
RFFLQ8WZ73 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
RFFLQ8WZ73 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
RFFLQ8WZ73 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
RFFLQ8WZ73 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
RFFLQ8WZ73 AC145676.1-201ENST00000514988 2004 ntBASIC26.31■■□□□ 1.8
RFFLQ8WZ73 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RFFLQ8WZ73 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
RFFLQ8WZ73 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
RFFLQ8WZ73 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
RFFLQ8WZ73 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
RFFLQ8WZ73 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
RFFLQ8WZ73 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
RFFLQ8WZ73 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC26.29■■□□□ 1.8
RFFLQ8WZ73 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC26.29■■□□□ 1.8
RFFLQ8WZ73 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC26.29■■□□□ 1.8
RFFLQ8WZ73 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC26.28■■□□□ 1.8
RFFLQ8WZ73 DUX4L29-201ENST00000425409 679 ntBASIC26.28■■□□□ 1.8
RFFLQ8WZ73 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC26.28■■□□□ 1.8
RFFLQ8WZ73 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC26.28■■□□□ 1.8
RFFLQ8WZ73 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
RFFLQ8WZ73 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
RFFLQ8WZ73 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC26.28■■□□□ 1.8
RFFLQ8WZ73 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
RFFLQ8WZ73 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
RFFLQ8WZ73 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
RFFLQ8WZ73 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC26.25■■□□□ 1.79
RFFLQ8WZ73 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
RFFLQ8WZ73 WHAMMP3-201ENST00000611636 1609 ntBASIC26.25■■□□□ 1.79
RFFLQ8WZ73 AC142472.1-201ENST00000612013 1741 ntBASIC26.24■■□□□ 1.79
RFFLQ8WZ73 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
RFFLQ8WZ73 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
RFFLQ8WZ73 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
RFFLQ8WZ73 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
RFFLQ8WZ73 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC26.22■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 10.8 ms