Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 U85056.1-201ENST00000616429 682 ntBASIC30■■■□□ 2.39
SH3RF3Q8TEJ3 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC29.99■■■□□ 2.39
SH3RF3Q8TEJ3 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
SH3RF3Q8TEJ3 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC29.99■■■□□ 2.39
SH3RF3Q8TEJ3 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC29.99■■■□□ 2.39
SH3RF3Q8TEJ3 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
SH3RF3Q8TEJ3 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC29.99■■■□□ 2.39
SH3RF3Q8TEJ3 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC29.98■■■□□ 2.39
SH3RF3Q8TEJ3 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
SH3RF3Q8TEJ3 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC29.97■■■□□ 2.39
SH3RF3Q8TEJ3 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC29.97■■■□□ 2.39
SH3RF3Q8TEJ3 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC29.97■■■□□ 2.39
SH3RF3Q8TEJ3 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC29.97■■■□□ 2.39
SH3RF3Q8TEJ3 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC29.97■■■□□ 2.39
SH3RF3Q8TEJ3 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC29.97■■■□□ 2.39
SH3RF3Q8TEJ3 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC29.97■■■□□ 2.39
SH3RF3Q8TEJ3 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC29.96■■■□□ 2.39
SH3RF3Q8TEJ3 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
SH3RF3Q8TEJ3 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC29.96■■■□□ 2.39
SH3RF3Q8TEJ3 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC29.95■■■□□ 2.39
SH3RF3Q8TEJ3 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
SH3RF3Q8TEJ3 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
SH3RF3Q8TEJ3 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.38
SH3RF3Q8TEJ3 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC29.94■■■□□ 2.38
SH3RF3Q8TEJ3 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
SH3RF3Q8TEJ3 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
SH3RF3Q8TEJ3 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC29.92■■■□□ 2.38
SH3RF3Q8TEJ3 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
SH3RF3Q8TEJ3 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
SH3RF3Q8TEJ3 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC29.91■■■□□ 2.38
SH3RF3Q8TEJ3 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC29.9■■■□□ 2.38
SH3RF3Q8TEJ3 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC29.9■■■□□ 2.38
SH3RF3Q8TEJ3 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
SH3RF3Q8TEJ3 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
SH3RF3Q8TEJ3 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
SH3RF3Q8TEJ3 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
SH3RF3Q8TEJ3 AC018358.1-201ENST00000631079 1402 ntBASIC29.89■■■□□ 2.38
SH3RF3Q8TEJ3 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
SH3RF3Q8TEJ3 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
SH3RF3Q8TEJ3 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
SH3RF3Q8TEJ3 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
SH3RF3Q8TEJ3 AC012354.3-201ENST00000623734 483 ntBASIC29.87■■■□□ 2.37
SH3RF3Q8TEJ3 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
SH3RF3Q8TEJ3 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
SH3RF3Q8TEJ3 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
SH3RF3Q8TEJ3 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC29.85■■■□□ 2.37
SH3RF3Q8TEJ3 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC29.85■■■□□ 2.37
SH3RF3Q8TEJ3 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC29.84■■■□□ 2.37
SH3RF3Q8TEJ3 KRT18P60-201ENST00000312876 1297 ntBASIC29.84■■■□□ 2.37
SH3RF3Q8TEJ3 AC007029.1-201ENST00000604183 313 ntBASIC29.84■■■□□ 2.37
SH3RF3Q8TEJ3 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
SH3RF3Q8TEJ3 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC29.84■■■□□ 2.37
SH3RF3Q8TEJ3 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC29.84■■■□□ 2.37
SH3RF3Q8TEJ3 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
SH3RF3Q8TEJ3 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC29.83■■■□□ 2.37
SH3RF3Q8TEJ3 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
SH3RF3Q8TEJ3 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC29.83■■■□□ 2.37
SH3RF3Q8TEJ3 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC29.83■■■□□ 2.37
SH3RF3Q8TEJ3 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
SH3RF3Q8TEJ3 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
SH3RF3Q8TEJ3 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC29.82■■■□□ 2.36
SH3RF3Q8TEJ3 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC29.82■■■□□ 2.36
SH3RF3Q8TEJ3 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC29.81■■■□□ 2.36
SH3RF3Q8TEJ3 PROC-203ENST00000409048 1586 ntTSL 5 BASIC29.81■■■□□ 2.36
SH3RF3Q8TEJ3 SMPD5-203ENST00000639008 1464 ntBASIC29.81■■■□□ 2.36
SH3RF3Q8TEJ3 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
SH3RF3Q8TEJ3 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC29.81■■■□□ 2.36
SH3RF3Q8TEJ3 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
SH3RF3Q8TEJ3 DRD5P2-201ENST00000421395 2012 ntBASIC29.8■■■□□ 2.36
SH3RF3Q8TEJ3 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
SH3RF3Q8TEJ3 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC29.8■■■□□ 2.36
SH3RF3Q8TEJ3 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
SH3RF3Q8TEJ3 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC29.79■■■□□ 2.36
SH3RF3Q8TEJ3 REST-210ENST00000638187 1334 ntTSL 5 BASIC29.79■■■□□ 2.36
SH3RF3Q8TEJ3 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
SH3RF3Q8TEJ3 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
SH3RF3Q8TEJ3 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
SH3RF3Q8TEJ3 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
SH3RF3Q8TEJ3 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC29.78■■■□□ 2.36
SH3RF3Q8TEJ3 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC29.78■■■□□ 2.36
SH3RF3Q8TEJ3 AC025884.2-201ENST00000553429 711 ntBASIC29.78■■■□□ 2.36
SH3RF3Q8TEJ3 AL033527.3-201ENST00000566366 1196 ntBASIC29.78■■■□□ 2.36
SH3RF3Q8TEJ3 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC29.78■■■□□ 2.36
SH3RF3Q8TEJ3 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
SH3RF3Q8TEJ3 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC29.77■■■□□ 2.36
SH3RF3Q8TEJ3 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC29.77■■■□□ 2.36
SH3RF3Q8TEJ3 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
SH3RF3Q8TEJ3 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC29.77■■■□□ 2.36
SH3RF3Q8TEJ3 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC29.77■■■□□ 2.36
SH3RF3Q8TEJ3 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.36
SH3RF3Q8TEJ3 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC29.76■■■□□ 2.35
SH3RF3Q8TEJ3 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC29.76■■■□□ 2.35
SH3RF3Q8TEJ3 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC29.76■■■□□ 2.35
SH3RF3Q8TEJ3 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC29.75■■■□□ 2.35
SH3RF3Q8TEJ3 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
SH3RF3Q8TEJ3 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC29.75■■■□□ 2.35
SH3RF3Q8TEJ3 AC009831.1-201ENST00000580420 1582 ntBASIC29.74■■■□□ 2.35
SH3RF3Q8TEJ3 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
SH3RF3Q8TEJ3 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
SH3RF3Q8TEJ3 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC29.74■■■□□ 2.35
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms