Protein–RNA interactions for Protein: Q8N535

LINC00471, Putative uncharacterized protein encoded by LINC00471, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00471Q8N535 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC22.75■■□□□ 1.23
LINC00471Q8N535 DUSP8P4-201ENST00000399538 1761 ntBASIC22.75■■□□□ 1.23
LINC00471Q8N535 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
LINC00471Q8N535 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
LINC00471Q8N535 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC22.74■■□□□ 1.23
LINC00471Q8N535 MIR3665-201ENST00000578708 105 ntBASIC22.74■■□□□ 1.23
LINC00471Q8N535 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
LINC00471Q8N535 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
LINC00471Q8N535 AP004609.3-201ENST00000610705 1884 ntBASIC22.73■■□□□ 1.23
LINC00471Q8N535 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
LINC00471Q8N535 DUX4L28-201ENST00000623687 678 ntBASIC22.73■■□□□ 1.23
LINC00471Q8N535 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC22.73■■□□□ 1.23
LINC00471Q8N535 AC092803.2-201ENST00000564287 1899 ntBASIC22.73■■□□□ 1.23
LINC00471Q8N535 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC22.72■■□□□ 1.23
LINC00471Q8N535 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC22.72■■□□□ 1.23
LINC00471Q8N535 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
LINC00471Q8N535 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
LINC00471Q8N535 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
LINC00471Q8N535 AC135731.1-201ENST00000569415 2548 ntBASIC22.7■■□□□ 1.22
LINC00471Q8N535 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC22.7■■□□□ 1.22
LINC00471Q8N535 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.22
LINC00471Q8N535 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
LINC00471Q8N535 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC22.69■■□□□ 1.22
LINC00471Q8N535 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
LINC00471Q8N535 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC22.69■■□□□ 1.22
LINC00471Q8N535 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
LINC00471Q8N535 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
LINC00471Q8N535 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
LINC00471Q8N535 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
LINC00471Q8N535 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
LINC00471Q8N535 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC22.67■■□□□ 1.22
LINC00471Q8N535 AC142472.1-201ENST00000612013 1741 ntBASIC22.65■■□□□ 1.22
LINC00471Q8N535 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
LINC00471Q8N535 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC22.65■■□□□ 1.22
LINC00471Q8N535 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC22.65■■□□□ 1.22
LINC00471Q8N535 CIB2-204ENST00000557846 934 ntTSL 3 BASIC22.65■■□□□ 1.22
LINC00471Q8N535 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
LINC00471Q8N535 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
LINC00471Q8N535 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
LINC00471Q8N535 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC22.64■■□□□ 1.21
LINC00471Q8N535 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC22.64■■□□□ 1.21
LINC00471Q8N535 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC22.64■■□□□ 1.21
LINC00471Q8N535 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC22.63■■□□□ 1.21
LINC00471Q8N535 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
LINC00471Q8N535 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
LINC00471Q8N535 AC020928.2-201ENST00000588717 2197 ntBASIC22.63■■□□□ 1.21
LINC00471Q8N535 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC22.63■■□□□ 1.21
LINC00471Q8N535 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
LINC00471Q8N535 AP006261.1-201ENST00000584783 668 ntBASIC22.63■■□□□ 1.21
LINC00471Q8N535 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC22.63■■□□□ 1.21
LINC00471Q8N535 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
LINC00471Q8N535 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
LINC00471Q8N535 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC22.62■■□□□ 1.21
LINC00471Q8N535 AC110285.7-201ENST00000624417 1536 ntBASIC22.62■■□□□ 1.21
LINC00471Q8N535 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC22.62■■□□□ 1.21
LINC00471Q8N535 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
LINC00471Q8N535 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
LINC00471Q8N535 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
LINC00471Q8N535 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC22.61■■□□□ 1.21
LINC00471Q8N535 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
LINC00471Q8N535 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
LINC00471Q8N535 PEX7-203ENST00000541292 945 ntTSL 5 BASIC22.61■■□□□ 1.21
LINC00471Q8N535 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC22.61■■□□□ 1.21
LINC00471Q8N535 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
LINC00471Q8N535 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
LINC00471Q8N535 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
LINC00471Q8N535 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
LINC00471Q8N535 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
LINC00471Q8N535 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
LINC00471Q8N535 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
LINC00471Q8N535 WHAMMP3-201ENST00000611636 1609 ntBASIC22.6■■□□□ 1.21
LINC00471Q8N535 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
LINC00471Q8N535 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
LINC00471Q8N535 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
LINC00471Q8N535 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
LINC00471Q8N535 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
LINC00471Q8N535 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
LINC00471Q8N535 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
LINC00471Q8N535 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
LINC00471Q8N535 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC22.58■■□□□ 1.21
LINC00471Q8N535 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC22.58■■□□□ 1.2
LINC00471Q8N535 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
LINC00471Q8N535 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
LINC00471Q8N535 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
LINC00471Q8N535 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
LINC00471Q8N535 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
LINC00471Q8N535 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
LINC00471Q8N535 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
LINC00471Q8N535 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
LINC00471Q8N535 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
LINC00471Q8N535 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
LINC00471Q8N535 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC22.56■■□□□ 1.2
LINC00471Q8N535 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
LINC00471Q8N535 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC22.56■■□□□ 1.2
LINC00471Q8N535 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
LINC00471Q8N535 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
LINC00471Q8N535 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
LINC00471Q8N535 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC22.54■■□□□ 1.2
LINC00471Q8N535 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC22.54■■□□□ 1.2
LINC00471Q8N535 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC22.54■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms