Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC24.03■■□□□ 1.44
KRT78Q8N1N4 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
KRT78Q8N1N4 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC24.03■■□□□ 1.44
KRT78Q8N1N4 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC24.03■■□□□ 1.44
KRT78Q8N1N4 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
KRT78Q8N1N4 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
KRT78Q8N1N4 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
KRT78Q8N1N4 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC24.01■■□□□ 1.43
KRT78Q8N1N4 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC24.01■■□□□ 1.43
KRT78Q8N1N4 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
KRT78Q8N1N4 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC24■■□□□ 1.43
KRT78Q8N1N4 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
KRT78Q8N1N4 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC24■■□□□ 1.43
KRT78Q8N1N4 AC016575.1-201ENST00000607026 382 ntBASIC24■■□□□ 1.43
KRT78Q8N1N4 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC23.99■■□□□ 1.43
KRT78Q8N1N4 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC23.99■■□□□ 1.43
KRT78Q8N1N4 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
KRT78Q8N1N4 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC23.99■■□□□ 1.43
KRT78Q8N1N4 AC148477.6-201ENST00000623746 465 ntBASIC23.98■■□□□ 1.43
KRT78Q8N1N4 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
KRT78Q8N1N4 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC23.98■■□□□ 1.43
KRT78Q8N1N4 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
KRT78Q8N1N4 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC23.97■■□□□ 1.43
KRT78Q8N1N4 PVT1-219ENST00000523427 938 ntTSL 3 BASIC23.97■■□□□ 1.43
KRT78Q8N1N4 AL121749.1-202ENST00000609313 2153 ntBASIC23.97■■□□□ 1.43
KRT78Q8N1N4 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC23.97■■□□□ 1.43
KRT78Q8N1N4 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
KRT78Q8N1N4 CHST11-203ENST00000547956 936 ntTSL 2 BASIC23.96■■□□□ 1.43
KRT78Q8N1N4 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
KRT78Q8N1N4 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC23.96■■□□□ 1.43
KRT78Q8N1N4 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
KRT78Q8N1N4 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC23.96■■□□□ 1.43
KRT78Q8N1N4 MIR219A2-201ENST00000608502 1504 ntBASIC23.95■■□□□ 1.43
KRT78Q8N1N4 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC23.95■■□□□ 1.43
KRT78Q8N1N4 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
KRT78Q8N1N4 HLA-V-202ENST00000446817 847 ntBASIC23.95■■□□□ 1.42
KRT78Q8N1N4 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
KRT78Q8N1N4 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
KRT78Q8N1N4 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
KRT78Q8N1N4 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
KRT78Q8N1N4 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
KRT78Q8N1N4 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
KRT78Q8N1N4 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
KRT78Q8N1N4 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
KRT78Q8N1N4 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
KRT78Q8N1N4 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
KRT78Q8N1N4 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC23.92■■□□□ 1.42
KRT78Q8N1N4 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC23.92■■□□□ 1.42
KRT78Q8N1N4 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
KRT78Q8N1N4 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC23.92■■□□□ 1.42
KRT78Q8N1N4 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
KRT78Q8N1N4 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
KRT78Q8N1N4 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
KRT78Q8N1N4 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC23.91■■□□□ 1.42
KRT78Q8N1N4 METRNL-202ENST00000570778 967 ntTSL 5 BASIC23.91■■□□□ 1.42
KRT78Q8N1N4 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC23.91■■□□□ 1.42
KRT78Q8N1N4 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
KRT78Q8N1N4 WHAMMP3-201ENST00000611636 1609 ntBASIC23.91■■□□□ 1.42
KRT78Q8N1N4 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC23.91■■□□□ 1.42
KRT78Q8N1N4 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
KRT78Q8N1N4 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC23.91■■□□□ 1.42
KRT78Q8N1N4 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
KRT78Q8N1N4 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC23.9■■□□□ 1.42
KRT78Q8N1N4 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC23.9■■□□□ 1.42
KRT78Q8N1N4 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
KRT78Q8N1N4 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
KRT78Q8N1N4 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC23.89■■□□□ 1.41
KRT78Q8N1N4 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.41
KRT78Q8N1N4 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
KRT78Q8N1N4 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.41
KRT78Q8N1N4 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
KRT78Q8N1N4 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
KRT78Q8N1N4 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC23.88■■□□□ 1.41
KRT78Q8N1N4 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC23.88■■□□□ 1.41
KRT78Q8N1N4 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
KRT78Q8N1N4 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
KRT78Q8N1N4 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
KRT78Q8N1N4 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC23.87■■□□□ 1.41
KRT78Q8N1N4 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
KRT78Q8N1N4 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
KRT78Q8N1N4 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC23.87■■□□□ 1.41
KRT78Q8N1N4 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
KRT78Q8N1N4 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC23.87■■□□□ 1.41
KRT78Q8N1N4 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC23.87■■□□□ 1.41
KRT78Q8N1N4 AL449106.1-201ENST00000608517 1980 ntBASIC23.87■■□□□ 1.41
KRT78Q8N1N4 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
KRT78Q8N1N4 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
KRT78Q8N1N4 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
KRT78Q8N1N4 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
KRT78Q8N1N4 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
KRT78Q8N1N4 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
KRT78Q8N1N4 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
KRT78Q8N1N4 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC23.86■■□□□ 1.41
KRT78Q8N1N4 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
KRT78Q8N1N4 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
KRT78Q8N1N4 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
KRT78Q8N1N4 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC23.85■■□□□ 1.41
KRT78Q8N1N4 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC23.85■■□□□ 1.41
KRT78Q8N1N4 MIR639-201ENST00000384974 98 ntBASIC23.84■■□□□ 1.41
KRT78Q8N1N4 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms