Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 AC108673.1-201ENST00000510422 1159 ntBASIC25.71■■□□□ 1.71
FOXR1Q6PIV2 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC25.71■■□□□ 1.71
FOXR1Q6PIV2 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
FOXR1Q6PIV2 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC25.71■■□□□ 1.71
FOXR1Q6PIV2 MIR6090-201ENST00000622481 60 ntBASIC25.7■■□□□ 1.7
FOXR1Q6PIV2 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC25.7■■□□□ 1.7
FOXR1Q6PIV2 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.7
FOXR1Q6PIV2 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC25.7■■□□□ 1.7
FOXR1Q6PIV2 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
FOXR1Q6PIV2 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
FOXR1Q6PIV2 RNF166-209ENST00000567844 633 ntTSL 5 BASIC25.69■■□□□ 1.7
FOXR1Q6PIV2 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
FOXR1Q6PIV2 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
FOXR1Q6PIV2 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
FOXR1Q6PIV2 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
FOXR1Q6PIV2 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC25.68■■□□□ 1.7
FOXR1Q6PIV2 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC25.68■■□□□ 1.7
FOXR1Q6PIV2 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC25.68■■□□□ 1.7
FOXR1Q6PIV2 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
FOXR1Q6PIV2 THRA-202ENST00000394121 2260 ntTSL 2 BASIC25.67■■□□□ 1.7
FOXR1Q6PIV2 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC25.67■■□□□ 1.7
FOXR1Q6PIV2 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC25.67■■□□□ 1.7
FOXR1Q6PIV2 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
FOXR1Q6PIV2 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
FOXR1Q6PIV2 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC25.66■■□□□ 1.7
FOXR1Q6PIV2 MIR639-201ENST00000384974 98 ntBASIC25.66■■□□□ 1.7
FOXR1Q6PIV2 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC25.66■■□□□ 1.7
FOXR1Q6PIV2 MIR4449-201ENST00000578365 66 ntBASIC25.66■■□□□ 1.7
FOXR1Q6PIV2 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
FOXR1Q6PIV2 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC25.65■■□□□ 1.7
FOXR1Q6PIV2 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
FOXR1Q6PIV2 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC25.65■■□□□ 1.7
FOXR1Q6PIV2 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
FOXR1Q6PIV2 AC016575.1-201ENST00000607026 382 ntBASIC25.65■■□□□ 1.7
FOXR1Q6PIV2 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC25.65■■□□□ 1.7
FOXR1Q6PIV2 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
FOXR1Q6PIV2 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC25.64■■□□□ 1.7
FOXR1Q6PIV2 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
FOXR1Q6PIV2 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
FOXR1Q6PIV2 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
FOXR1Q6PIV2 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
FOXR1Q6PIV2 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
FOXR1Q6PIV2 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC25.63■■□□□ 1.69
FOXR1Q6PIV2 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC25.63■■□□□ 1.69
FOXR1Q6PIV2 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
FOXR1Q6PIV2 GDI1-215ENST00000630693 786 ntTSL 4 BASIC25.63■■□□□ 1.69
FOXR1Q6PIV2 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
FOXR1Q6PIV2 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
FOXR1Q6PIV2 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
FOXR1Q6PIV2 LINC01003-201ENST00000564834 1764 ntBASIC25.62■■□□□ 1.69
FOXR1Q6PIV2 MACF1-219ENST00000484793 834 ntTSL 2 BASIC25.62■■□□□ 1.69
FOXR1Q6PIV2 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC25.62■■□□□ 1.69
FOXR1Q6PIV2 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
FOXR1Q6PIV2 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC25.62■■□□□ 1.69
FOXR1Q6PIV2 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
FOXR1Q6PIV2 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
FOXR1Q6PIV2 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
FOXR1Q6PIV2 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC25.61■■□□□ 1.69
FOXR1Q6PIV2 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC25.61■■□□□ 1.69
FOXR1Q6PIV2 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC25.61■■□□□ 1.69
FOXR1Q6PIV2 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
FOXR1Q6PIV2 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC25.6■■□□□ 1.69
FOXR1Q6PIV2 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
FOXR1Q6PIV2 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC25.6■■□□□ 1.69
FOXR1Q6PIV2 MIR3648-2-201ENST00000581792 180 ntBASIC25.6■■□□□ 1.69
FOXR1Q6PIV2 MIR3648-1-201ENST00000615959 180 ntBASIC25.6■■□□□ 1.69
FOXR1Q6PIV2 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC25.6■■□□□ 1.69
FOXR1Q6PIV2 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
FOXR1Q6PIV2 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC25.6■■□□□ 1.69
FOXR1Q6PIV2 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC25.6■■□□□ 1.69
FOXR1Q6PIV2 CALM3-209ENST00000597743 577 ntTSL 4 BASIC25.59■■□□□ 1.69
FOXR1Q6PIV2 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
FOXR1Q6PIV2 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
FOXR1Q6PIV2 AC133561.1-201ENST00000568600 2415 ntBASIC25.58■■□□□ 1.69
FOXR1Q6PIV2 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
FOXR1Q6PIV2 PROC-203ENST00000409048 1586 ntTSL 5 BASIC25.57■■□□□ 1.68
FOXR1Q6PIV2 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC25.57■■□□□ 1.68
FOXR1Q6PIV2 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC25.57■■□□□ 1.68
FOXR1Q6PIV2 RARA-203ENST00000394086 2008 ntTSL 2 BASIC25.57■■□□□ 1.68
FOXR1Q6PIV2 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC25.57■■□□□ 1.68
FOXR1Q6PIV2 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC25.56■■□□□ 1.68
FOXR1Q6PIV2 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC25.56■■□□□ 1.68
FOXR1Q6PIV2 AC145676.1-201ENST00000514988 2004 ntBASIC25.56■■□□□ 1.68
FOXR1Q6PIV2 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
FOXR1Q6PIV2 DUX4L11-201ENST00000611504 1267 ntBASIC25.56■■□□□ 1.68
FOXR1Q6PIV2 DUX4L12-201ENST00000614593 1267 ntBASIC25.56■■□□□ 1.68
FOXR1Q6PIV2 DUX4L14-201ENST00000621227 1267 ntBASIC25.56■■□□□ 1.68
FOXR1Q6PIV2 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC25.56■■□□□ 1.68
FOXR1Q6PIV2 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC25.55■■□□□ 1.68
FOXR1Q6PIV2 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
FOXR1Q6PIV2 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
FOXR1Q6PIV2 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC25.55■■□□□ 1.68
FOXR1Q6PIV2 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC25.55■■□□□ 1.68
FOXR1Q6PIV2 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC25.55■■□□□ 1.68
FOXR1Q6PIV2 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
FOXR1Q6PIV2 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
FOXR1Q6PIV2 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
FOXR1Q6PIV2 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC25.54■■□□□ 1.68
FOXR1Q6PIV2 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC25.53■■□□□ 1.68
FOXR1Q6PIV2 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 136.6 ms