Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
USH1GQ495M9 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
USH1GQ495M9 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC28.85■■■□□ 2.21
USH1GQ495M9 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
USH1GQ495M9 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC28.85■■■□□ 2.21
USH1GQ495M9 AC092296.2-201ENST00000589470 999 ntBASIC28.85■■■□□ 2.21
USH1GQ495M9 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
USH1GQ495M9 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
USH1GQ495M9 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC28.84■■■□□ 2.21
USH1GQ495M9 DRD5P2-201ENST00000421395 2012 ntBASIC28.84■■■□□ 2.21
USH1GQ495M9 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC28.84■■■□□ 2.21
USH1GQ495M9 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
USH1GQ495M9 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC28.83■■■□□ 2.21
USH1GQ495M9 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
USH1GQ495M9 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC28.83■■■□□ 2.21
USH1GQ495M9 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC28.82■■■□□ 2.2
USH1GQ495M9 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC28.82■■■□□ 2.2
USH1GQ495M9 AL359258.2-201ENST00000564063 1566 ntBASIC28.82■■■□□ 2.2
USH1GQ495M9 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
USH1GQ495M9 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC28.81■■■□□ 2.2
USH1GQ495M9 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC28.81■■■□□ 2.2
USH1GQ495M9 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC28.81■■■□□ 2.2
USH1GQ495M9 MOB2-207ENST00000614710 705 ntTSL 5 BASIC28.81■■■□□ 2.2
USH1GQ495M9 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC28.81■■■□□ 2.2
USH1GQ495M9 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
USH1GQ495M9 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC28.81■■■□□ 2.2
USH1GQ495M9 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
USH1GQ495M9 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
USH1GQ495M9 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC28.8■■■□□ 2.2
USH1GQ495M9 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
USH1GQ495M9 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC28.8■■■□□ 2.2
USH1GQ495M9 AC018358.1-201ENST00000631079 1402 ntBASIC28.79■■■□□ 2.2
USH1GQ495M9 AL157400.5-201ENST00000507624 621 ntBASIC28.79■■■□□ 2.2
USH1GQ495M9 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
USH1GQ495M9 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
USH1GQ495M9 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
USH1GQ495M9 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC28.78■■■□□ 2.2
USH1GQ495M9 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC28.78■■■□□ 2.2
USH1GQ495M9 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
USH1GQ495M9 PROC-203ENST00000409048 1586 ntTSL 5 BASIC28.78■■■□□ 2.2
USH1GQ495M9 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC28.77■■■□□ 2.2
USH1GQ495M9 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC28.77■■■□□ 2.2
USH1GQ495M9 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC28.77■■■□□ 2.2
USH1GQ495M9 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC28.77■■■□□ 2.2
USH1GQ495M9 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
USH1GQ495M9 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC28.76■■■□□ 2.19
USH1GQ495M9 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC28.76■■■□□ 2.19
USH1GQ495M9 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC28.75■■■□□ 2.19
USH1GQ495M9 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC28.74■■■□□ 2.19
USH1GQ495M9 ECEL1P2-201ENST00000461596 1295 ntBASIC28.74■■■□□ 2.19
USH1GQ495M9 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
USH1GQ495M9 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC28.73■■■□□ 2.19
USH1GQ495M9 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC28.73■■■□□ 2.19
USH1GQ495M9 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
USH1GQ495M9 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC28.72■■■□□ 2.19
USH1GQ495M9 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
USH1GQ495M9 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC28.71■■■□□ 2.19
USH1GQ495M9 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
USH1GQ495M9 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC28.71■■■□□ 2.19
USH1GQ495M9 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC28.7■■■□□ 2.18
USH1GQ495M9 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
USH1GQ495M9 HYI-213ENST00000583037 1322 ntTSL 5 BASIC28.69■■■□□ 2.18
USH1GQ495M9 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC28.69■■■□□ 2.18
USH1GQ495M9 NTF6A-201ENST00000591175 560 ntBASIC28.68■■■□□ 2.18
USH1GQ495M9 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC28.68■■■□□ 2.18
USH1GQ495M9 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
USH1GQ495M9 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC28.67■■■□□ 2.18
USH1GQ495M9 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC28.67■■■□□ 2.18
USH1GQ495M9 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC28.67■■■□□ 2.18
USH1GQ495M9 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC28.66■■■□□ 2.18
USH1GQ495M9 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
USH1GQ495M9 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
USH1GQ495M9 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC28.65■■■□□ 2.18
USH1GQ495M9 U85056.1-201ENST00000616429 682 ntBASIC28.65■■■□□ 2.18
USH1GQ495M9 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC28.65■■■□□ 2.18
USH1GQ495M9 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
USH1GQ495M9 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
USH1GQ495M9 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.17
USH1GQ495M9 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
USH1GQ495M9 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC28.62■■■□□ 2.17
USH1GQ495M9 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
USH1GQ495M9 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC28.62■■■□□ 2.17
USH1GQ495M9 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
USH1GQ495M9 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC28.61■■■□□ 2.17
USH1GQ495M9 SHF-206ENST00000560471 2499 ntTSL 5 BASIC28.61■■■□□ 2.17
USH1GQ495M9 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC28.61■■■□□ 2.17
USH1GQ495M9 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC28.61■■■□□ 2.17
USH1GQ495M9 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
USH1GQ495M9 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
USH1GQ495M9 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC28.6■■■□□ 2.17
USH1GQ495M9 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
USH1GQ495M9 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC28.6■■■□□ 2.17
USH1GQ495M9 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC28.59■■■□□ 2.17
USH1GQ495M9 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
USH1GQ495M9 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
USH1GQ495M9 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
USH1GQ495M9 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
USH1GQ495M9 SMPD5-203ENST00000639008 1464 ntBASIC28.59■■■□□ 2.17
USH1GQ495M9 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
USH1GQ495M9 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC28.59■■■□□ 2.17
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms