Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC23.81■■□□□ 1.4
POLR2JP52435 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
POLR2JP52435 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC23.81■■□□□ 1.4
POLR2JP52435 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
POLR2JP52435 CALM3-209ENST00000597743 577 ntTSL 4 BASIC23.8■■□□□ 1.4
POLR2JP52435 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC23.8■■□□□ 1.4
POLR2JP52435 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
POLR2JP52435 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC23.8■■□□□ 1.4
POLR2JP52435 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC23.79■■□□□ 1.4
POLR2JP52435 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
POLR2JP52435 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC23.78■■□□□ 1.4
POLR2JP52435 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC23.78■■□□□ 1.4
POLR2JP52435 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC23.78■■□□□ 1.4
POLR2JP52435 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
POLR2JP52435 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
POLR2JP52435 AP004609.3-201ENST00000610705 1884 ntBASIC23.77■■□□□ 1.4
POLR2JP52435 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
POLR2JP52435 MIR3665-201ENST00000578708 105 ntBASIC23.77■■□□□ 1.4
POLR2JP52435 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC23.77■■□□□ 1.4
POLR2JP52435 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC23.77■■□□□ 1.4
POLR2JP52435 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
POLR2JP52435 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
POLR2JP52435 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC23.77■■□□□ 1.39
POLR2JP52435 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC23.76■■□□□ 1.39
POLR2JP52435 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
POLR2JP52435 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
POLR2JP52435 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
POLR2JP52435 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC23.74■■□□□ 1.39
POLR2JP52435 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC23.74■■□□□ 1.39
POLR2JP52435 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
POLR2JP52435 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
POLR2JP52435 AC092803.2-201ENST00000564287 1899 ntBASIC23.73■■□□□ 1.39
POLR2JP52435 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
POLR2JP52435 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC23.73■■□□□ 1.39
POLR2JP52435 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
POLR2JP52435 AC020928.2-201ENST00000588717 2197 ntBASIC23.72■■□□□ 1.39
POLR2JP52435 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
POLR2JP52435 DUSP8P4-201ENST00000399538 1761 ntBASIC23.71■■□□□ 1.39
POLR2JP52435 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
POLR2JP52435 CIB2-204ENST00000557846 934 ntTSL 3 BASIC23.71■■□□□ 1.39
POLR2JP52435 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
POLR2JP52435 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC23.7■■□□□ 1.38
POLR2JP52435 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
POLR2JP52435 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC23.69■■□□□ 1.38
POLR2JP52435 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC23.69■■□□□ 1.38
POLR2JP52435 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
POLR2JP52435 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
POLR2JP52435 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC23.69■■□□□ 1.38
POLR2JP52435 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
POLR2JP52435 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
POLR2JP52435 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
POLR2JP52435 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC23.68■■□□□ 1.38
POLR2JP52435 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
POLR2JP52435 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
POLR2JP52435 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
POLR2JP52435 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC23.67■■□□□ 1.38
POLR2JP52435 AC110285.7-201ENST00000624417 1536 ntBASIC23.67■■□□□ 1.38
POLR2JP52435 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
POLR2JP52435 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
POLR2JP52435 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC23.67■■□□□ 1.38
POLR2JP52435 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
POLR2JP52435 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
POLR2JP52435 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
POLR2JP52435 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
POLR2JP52435 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC23.66■■□□□ 1.38
POLR2JP52435 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC23.66■■□□□ 1.38
POLR2JP52435 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC23.65■■□□□ 1.38
POLR2JP52435 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
POLR2JP52435 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
POLR2JP52435 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
POLR2JP52435 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
POLR2JP52435 PEX7-203ENST00000541292 945 ntTSL 5 BASIC23.65■■□□□ 1.38
POLR2JP52435 AP006261.1-201ENST00000584783 668 ntBASIC23.65■■□□□ 1.38
POLR2JP52435 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC23.64■■□□□ 1.38
POLR2JP52435 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
POLR2JP52435 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
POLR2JP52435 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.38
POLR2JP52435 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
POLR2JP52435 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC23.63■■□□□ 1.37
POLR2JP52435 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
POLR2JP52435 AC142472.1-201ENST00000612013 1741 ntBASIC23.63■■□□□ 1.37
POLR2JP52435 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
POLR2JP52435 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
POLR2JP52435 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC23.62■■□□□ 1.37
POLR2JP52435 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
POLR2JP52435 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
POLR2JP52435 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
POLR2JP52435 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
POLR2JP52435 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC23.62■■□□□ 1.37
POLR2JP52435 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC23.62■■□□□ 1.37
POLR2JP52435 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
POLR2JP52435 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
POLR2JP52435 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
POLR2JP52435 AC087741.3-201ENST00000624270 1347 ntBASIC23.6■■□□□ 1.37
POLR2JP52435 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
POLR2JP52435 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
POLR2JP52435 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
POLR2JP52435 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
POLR2JP52435 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
POLR2JP52435 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms