Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
PDE6BP35913 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC31.34■■■□□ 2.61
PDE6BP35913 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
PDE6BP35913 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
PDE6BP35913 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC31.34■■■□□ 2.61
PDE6BP35913 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
PDE6BP35913 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC31.34■■■□□ 2.61
PDE6BP35913 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
PDE6BP35913 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
PDE6BP35913 AC010980.1-201ENST00000587192 1142 ntBASIC31.33■■■□□ 2.61
PDE6BP35913 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC31.33■■■□□ 2.61
PDE6BP35913 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC31.33■■■□□ 2.61
PDE6BP35913 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
PDE6BP35913 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
PDE6BP35913 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC31.32■■■□□ 2.6
PDE6BP35913 AC093536.1-201ENST00000569153 554 ntBASIC31.32■■■□□ 2.6
PDE6BP35913 RAP2CP1-202ENST00000605179 643 ntBASIC31.32■■■□□ 2.6
PDE6BP35913 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC31.32■■■□□ 2.6
PDE6BP35913 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC31.31■■■□□ 2.6
PDE6BP35913 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
PDE6BP35913 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC31.29■■■□□ 2.6
PDE6BP35913 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC31.29■■■□□ 2.6
PDE6BP35913 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
PDE6BP35913 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
PDE6BP35913 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC31.28■■■□□ 2.6
PDE6BP35913 AL592295.1-201ENST00000400984 884 ntBASIC31.28■■■□□ 2.6
PDE6BP35913 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC31.28■■■□□ 2.6
PDE6BP35913 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC31.28■■■□□ 2.6
PDE6BP35913 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC31.28■■■□□ 2.6
PDE6BP35913 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC31.28■■■□□ 2.6
PDE6BP35913 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
PDE6BP35913 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
PDE6BP35913 KRT8P33-201ENST00000508125 1423 ntBASIC31.27■■■□□ 2.6
PDE6BP35913 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC31.27■■■□□ 2.6
PDE6BP35913 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC31.27■■■□□ 2.6
PDE6BP35913 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC31.27■■■□□ 2.6
PDE6BP35913 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC31.27■■■□□ 2.6
PDE6BP35913 SPCS2P3-201ENST00000500401 656 ntBASIC31.27■■■□□ 2.6
PDE6BP35913 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
PDE6BP35913 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
PDE6BP35913 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC31.27■■■□□ 2.6
PDE6BP35913 AC100797.4-201ENST00000631653 1827 ntBASIC31.26■■■□□ 2.6
PDE6BP35913 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC31.26■■■□□ 2.6
PDE6BP35913 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
PDE6BP35913 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC31.26■■■□□ 2.59
PDE6BP35913 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
PDE6BP35913 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC31.25■■■□□ 2.59
PDE6BP35913 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
PDE6BP35913 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC31.24■■■□□ 2.59
PDE6BP35913 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC31.24■■■□□ 2.59
PDE6BP35913 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
PDE6BP35913 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
PDE6BP35913 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC31.23■■■□□ 2.59
PDE6BP35913 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
PDE6BP35913 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC31.23■■■□□ 2.59
PDE6BP35913 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC31.23■■■□□ 2.59
PDE6BP35913 AC009299.2-201ENST00000482477 511 ntBASIC31.23■■■□□ 2.59
PDE6BP35913 AC139795.1-202ENST00000500444 432 ntBASIC31.23■■■□□ 2.59
PDE6BP35913 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
PDE6BP35913 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC31.23■■■□□ 2.59
PDE6BP35913 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC31.23■■■□□ 2.59
PDE6BP35913 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
PDE6BP35913 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC31.22■■■□□ 2.59
PDE6BP35913 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC31.22■■■□□ 2.59
PDE6BP35913 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC31.22■■■□□ 2.59
PDE6BP35913 PFN2-211ENST00000489155 636 ntTSL 4 BASIC31.21■■■□□ 2.59
PDE6BP35913 MIR6765-201ENST00000614092 87 ntBASIC31.21■■■□□ 2.59
PDE6BP35913 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC31.21■■■□□ 2.59
PDE6BP35913 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC31.21■■■□□ 2.59
PDE6BP35913 YBX1P4-201ENST00000392794 808 ntBASIC31.2■■■□□ 2.59
PDE6BP35913 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC31.2■■■□□ 2.59
PDE6BP35913 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC31.2■■■□□ 2.59
PDE6BP35913 MIR3960-201ENST00000583311 91 ntBASIC31.2■■■□□ 2.59
PDE6BP35913 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC31.2■■■□□ 2.58
PDE6BP35913 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC31.19■■■□□ 2.58
PDE6BP35913 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
PDE6BP35913 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC31.19■■■□□ 2.58
PDE6BP35913 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
PDE6BP35913 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
PDE6BP35913 BEX3-202ENST00000372634 753 ntTSL 2 BASIC31.19■■■□□ 2.58
PDE6BP35913 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
PDE6BP35913 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
PDE6BP35913 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
PDE6BP35913 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
PDE6BP35913 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
PDE6BP35913 HYI-210ENST00000486909 905 ntTSL 5 BASIC31.17■■■□□ 2.58
PDE6BP35913 AC103834.1-201ENST00000520383 144 ntBASIC31.17■■■□□ 2.58
PDE6BP35913 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC31.17■■■□□ 2.58
PDE6BP35913 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
PDE6BP35913 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
PDE6BP35913 HES6-204ENST00000409182 863 ntTSL 2 BASIC31.15■■■□□ 2.58
PDE6BP35913 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
PDE6BP35913 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC31.15■■■□□ 2.58
PDE6BP35913 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC31.15■■■□□ 2.58
PDE6BP35913 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC31.15■■■□□ 2.58
PDE6BP35913 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC31.14■■■□□ 2.58
PDE6BP35913 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC31.14■■■□□ 2.58
PDE6BP35913 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC31.14■■■□□ 2.57
PDE6BP35913 AC018755.3-202ENST00000596210 929 ntBASIC31.13■■■□□ 2.57
PDE6BP35913 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms