Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC24.84■■□□□ 1.57
NDUFS3O75489 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
NDUFS3O75489 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC24.83■■□□□ 1.57
NDUFS3O75489 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
NDUFS3O75489 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
NDUFS3O75489 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
NDUFS3O75489 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
NDUFS3O75489 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
NDUFS3O75489 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC24.82■■□□□ 1.56
NDUFS3O75489 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
NDUFS3O75489 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
NDUFS3O75489 AC008813.1-201ENST00000536597 885 ntBASIC24.81■■□□□ 1.56
NDUFS3O75489 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC24.81■■□□□ 1.56
NDUFS3O75489 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC24.81■■□□□ 1.56
NDUFS3O75489 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC24.8■■□□□ 1.56
NDUFS3O75489 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
NDUFS3O75489 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC24.8■■□□□ 1.56
NDUFS3O75489 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC24.8■■□□□ 1.56
NDUFS3O75489 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
NDUFS3O75489 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
NDUFS3O75489 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC24.79■■□□□ 1.56
NDUFS3O75489 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
NDUFS3O75489 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC24.78■■□□□ 1.56
NDUFS3O75489 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
NDUFS3O75489 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC24.78■■□□□ 1.56
NDUFS3O75489 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
NDUFS3O75489 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC24.77■■□□□ 1.56
NDUFS3O75489 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
NDUFS3O75489 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC24.77■■□□□ 1.56
NDUFS3O75489 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
NDUFS3O75489 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
NDUFS3O75489 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
NDUFS3O75489 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
NDUFS3O75489 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
NDUFS3O75489 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC24.76■■□□□ 1.55
NDUFS3O75489 CR559946.2-201ENST00000623684 991 ntBASIC24.76■■□□□ 1.55
NDUFS3O75489 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC24.76■■□□□ 1.55
NDUFS3O75489 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC24.76■■□□□ 1.55
NDUFS3O75489 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
NDUFS3O75489 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC24.76■■□□□ 1.55
NDUFS3O75489 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC24.75■■□□□ 1.55
NDUFS3O75489 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC24.75■■□□□ 1.55
NDUFS3O75489 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC24.75■■□□□ 1.55
NDUFS3O75489 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC24.75■■□□□ 1.55
NDUFS3O75489 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC24.75■■□□□ 1.55
NDUFS3O75489 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC24.75■■□□□ 1.55
NDUFS3O75489 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
NDUFS3O75489 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC24.74■■□□□ 1.55
NDUFS3O75489 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC24.74■■□□□ 1.55
NDUFS3O75489 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC24.74■■□□□ 1.55
NDUFS3O75489 GDI1-215ENST00000630693 786 ntTSL 4 BASIC24.74■■□□□ 1.55
NDUFS3O75489 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
NDUFS3O75489 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC24.74■■□□□ 1.55
NDUFS3O75489 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
NDUFS3O75489 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
NDUFS3O75489 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
NDUFS3O75489 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
NDUFS3O75489 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC24.73■■□□□ 1.55
NDUFS3O75489 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC24.73■■□□□ 1.55
NDUFS3O75489 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC24.73■■□□□ 1.55
NDUFS3O75489 MIR3648-2-201ENST00000581792 180 ntBASIC24.73■■□□□ 1.55
NDUFS3O75489 MIR7108-201ENST00000614319 87 ntBASIC24.73■■□□□ 1.55
NDUFS3O75489 MIR3648-1-201ENST00000615959 180 ntBASIC24.73■■□□□ 1.55
NDUFS3O75489 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
NDUFS3O75489 MACF1-219ENST00000484793 834 ntTSL 2 BASIC24.72■■□□□ 1.55
NDUFS3O75489 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
NDUFS3O75489 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC24.71■■□□□ 1.55
NDUFS3O75489 PKM-203ENST00000389093 2279 ntTSL 5 BASIC24.71■■□□□ 1.55
NDUFS3O75489 AL449106.1-201ENST00000608517 1980 ntBASIC24.71■■□□□ 1.55
NDUFS3O75489 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC24.7■■□□□ 1.54
NDUFS3O75489 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
NDUFS3O75489 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC24.7■■□□□ 1.54
NDUFS3O75489 WHAMMP3-201ENST00000611636 1609 ntBASIC24.7■■□□□ 1.54
NDUFS3O75489 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC24.7■■□□□ 1.54
NDUFS3O75489 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC24.7■■□□□ 1.54
NDUFS3O75489 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
NDUFS3O75489 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
NDUFS3O75489 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
NDUFS3O75489 HLA-V-202ENST00000446817 847 ntBASIC24.69■■□□□ 1.54
NDUFS3O75489 MIR219A2-201ENST00000608502 1504 ntBASIC24.69■■□□□ 1.54
NDUFS3O75489 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC24.69■■□□□ 1.54
NDUFS3O75489 AC016575.1-201ENST00000607026 382 ntBASIC24.68■■□□□ 1.54
NDUFS3O75489 AC148477.6-201ENST00000623746 465 ntBASIC24.68■■□□□ 1.54
NDUFS3O75489 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
NDUFS3O75489 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
NDUFS3O75489 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
NDUFS3O75489 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
NDUFS3O75489 CHST11-203ENST00000547956 936 ntTSL 2 BASIC24.67■■□□□ 1.54
NDUFS3O75489 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC24.67■■□□□ 1.54
NDUFS3O75489 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC24.66■■□□□ 1.54
NDUFS3O75489 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
NDUFS3O75489 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
NDUFS3O75489 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC24.66■■□□□ 1.54
NDUFS3O75489 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
NDUFS3O75489 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC24.66■■□□□ 1.54
NDUFS3O75489 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
NDUFS3O75489 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
NDUFS3O75489 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
NDUFS3O75489 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
NDUFS3O75489 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC24.65■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms