Protein–RNA interactions for Protein: O60888

CUTA, Protein CutA, humanhuman

Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUTAO60888 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC28.27■■■□□ 2.12
CUTAO60888 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC28.27■■■□□ 2.12
CUTAO60888 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC28.27■■■□□ 2.12
CUTAO60888 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
CUTAO60888 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC28.26■■■□□ 2.11
CUTAO60888 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
CUTAO60888 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
CUTAO60888 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC28.26■■■□□ 2.11
CUTAO60888 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
CUTAO60888 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC28.25■■■□□ 2.11
CUTAO60888 RPS2-210ENST00000530225 765 ntTSL 2 BASIC28.25■■■□□ 2.11
CUTAO60888 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC28.25■■■□□ 2.11
CUTAO60888 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC28.25■■■□□ 2.11
CUTAO60888 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
CUTAO60888 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC28.24■■■□□ 2.11
CUTAO60888 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
CUTAO60888 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC28.24■■■□□ 2.11
CUTAO60888 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC28.23■■■□□ 2.11
CUTAO60888 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC28.23■■■□□ 2.11
CUTAO60888 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC28.23■■■□□ 2.11
CUTAO60888 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
CUTAO60888 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC28.22■■■□□ 2.11
CUTAO60888 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
CUTAO60888 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
CUTAO60888 LINC01971-201ENST00000617888 1048 ntBASIC28.22■■■□□ 2.11
CUTAO60888 CHML-204ENST00000638121 920 ntTSL 2 BASIC28.22■■■□□ 2.11
CUTAO60888 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
CUTAO60888 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC28.22■■■□□ 2.11
CUTAO60888 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC28.2■■■□□ 2.1
CUTAO60888 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC28.2■■■□□ 2.1
CUTAO60888 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
CUTAO60888 AP004609.3-201ENST00000610705 1884 ntBASIC28.19■■■□□ 2.1
CUTAO60888 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC28.19■■■□□ 2.1
CUTAO60888 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC28.19■■■□□ 2.1
CUTAO60888 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
CUTAO60888 AC091060.1-201ENST00000623524 1766 ntBASIC28.19■■■□□ 2.1
CUTAO60888 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
CUTAO60888 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
CUTAO60888 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
CUTAO60888 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
CUTAO60888 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC28.18■■■□□ 2.1
CUTAO60888 WHAMMP3-201ENST00000611636 1609 ntBASIC28.18■■■□□ 2.1
CUTAO60888 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC28.17■■■□□ 2.1
CUTAO60888 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC28.17■■■□□ 2.1
CUTAO60888 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
CUTAO60888 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC28.17■■■□□ 2.1
CUTAO60888 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC28.15■■■□□ 2.1
CUTAO60888 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC28.15■■■□□ 2.1
CUTAO60888 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
CUTAO60888 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC28.14■■■□□ 2.1
CUTAO60888 DUX4L13-201ENST00000554103 1267 ntBASIC28.13■■■□□ 2.09
CUTAO60888 DUX4L15-201ENST00000611059 1267 ntBASIC28.13■■■□□ 2.09
CUTAO60888 DUX4L23-201ENST00000615195 1269 ntBASIC28.13■■■□□ 2.09
CUTAO60888 DUX4L24-201ENST00000617576 1269 ntBASIC28.13■■■□□ 2.09
CUTAO60888 DUX4L22-201ENST00000618238 1269 ntBASIC28.13■■■□□ 2.09
CUTAO60888 DUX4L20-201ENST00000619712 1269 ntBASIC28.13■■■□□ 2.09
CUTAO60888 DUX4L21-201ENST00000622058 1269 ntBASIC28.13■■■□□ 2.09
CUTAO60888 DUX4L10-201ENST00000622460 1267 ntBASIC28.13■■■□□ 2.09
CUTAO60888 DUX4L25-201ENST00000624915 1269 ntBASIC28.13■■■□□ 2.09
CUTAO60888 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC28.12■■■□□ 2.09
CUTAO60888 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
CUTAO60888 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
CUTAO60888 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC28.12■■■□□ 2.09
CUTAO60888 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC28.11■■■□□ 2.09
CUTAO60888 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC28.11■■■□□ 2.09
CUTAO60888 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC28.11■■■□□ 2.09
CUTAO60888 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
CUTAO60888 AC142472.1-201ENST00000612013 1741 ntBASIC28.11■■■□□ 2.09
CUTAO60888 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
CUTAO60888 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC28.1■■■□□ 2.09
CUTAO60888 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
CUTAO60888 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC28.1■■■□□ 2.09
CUTAO60888 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC28.09■■■□□ 2.09
CUTAO60888 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC28.09■■■□□ 2.09
CUTAO60888 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC28.09■■■□□ 2.09
CUTAO60888 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
CUTAO60888 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC28.08■■■□□ 2.09
CUTAO60888 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC28.08■■■□□ 2.09
CUTAO60888 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
CUTAO60888 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
CUTAO60888 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
CUTAO60888 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
CUTAO60888 DUX4L11-201ENST00000611504 1267 ntBASIC28.07■■■□□ 2.08
CUTAO60888 DUX4L12-201ENST00000614593 1267 ntBASIC28.07■■■□□ 2.08
CUTAO60888 DUX4L14-201ENST00000621227 1267 ntBASIC28.07■■■□□ 2.08
CUTAO60888 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC28.07■■■□□ 2.08
CUTAO60888 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
CUTAO60888 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC28.07■■■□□ 2.08
CUTAO60888 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
CUTAO60888 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC28.06■■■□□ 2.08
CUTAO60888 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC28.06■■■□□ 2.08
CUTAO60888 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC28.06■■■□□ 2.08
CUTAO60888 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC28.06■■■□□ 2.08
CUTAO60888 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
CUTAO60888 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
CUTAO60888 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC28.05■■■□□ 2.08
CUTAO60888 MLEC-202ENST00000412616 841 ntTSL 3 BASIC28.05■■■□□ 2.08
CUTAO60888 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC28.05■■■□□ 2.08
CUTAO60888 CHST11-202ENST00000546689 756 ntTSL 2 BASIC28.05■■■□□ 2.08
CUTAO60888 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms