Protein–RNA interactions for Protein: D6RIA3

LOC285556, Uncharacterized protein, humanhuman

Predictions only

Length 1,793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC285556D6RIA3 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
LOC285556D6RIA3 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC29.16■■■□□ 2.26
LOC285556D6RIA3 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
LOC285556D6RIA3 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC29.16■■■□□ 2.26
LOC285556D6RIA3 AC093536.1-201ENST00000569153 554 ntBASIC29.16■■■□□ 2.26
LOC285556D6RIA3 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC29.16■■■□□ 2.26
LOC285556D6RIA3 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
LOC285556D6RIA3 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC29.15■■■□□ 2.26
LOC285556D6RIA3 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
LOC285556D6RIA3 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC29.14■■■□□ 2.26
LOC285556D6RIA3 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC29.14■■■□□ 2.26
LOC285556D6RIA3 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC29.14■■■□□ 2.26
LOC285556D6RIA3 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC29.14■■■□□ 2.26
LOC285556D6RIA3 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC29.14■■■□□ 2.25
LOC285556D6RIA3 DUX4L9-201ENST00000449051 1259 ntBASIC29.13■■■□□ 2.25
LOC285556D6RIA3 AL451085.2-201ENST00000605085 799 ntBASIC29.13■■■□□ 2.25
LOC285556D6RIA3 RAP2CP1-202ENST00000605179 643 ntBASIC29.13■■■□□ 2.25
LOC285556D6RIA3 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC29.13■■■□□ 2.25
LOC285556D6RIA3 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC29.13■■■□□ 2.25
LOC285556D6RIA3 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC29.13■■■□□ 2.25
LOC285556D6RIA3 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC29.13■■■□□ 2.25
LOC285556D6RIA3 SMPD5-203ENST00000639008 1464 ntBASIC29.12■■■□□ 2.25
LOC285556D6RIA3 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC29.12■■■□□ 2.25
LOC285556D6RIA3 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC29.12■■■□□ 2.25
LOC285556D6RIA3 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC29.12■■■□□ 2.25
LOC285556D6RIA3 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC29.11■■■□□ 2.25
LOC285556D6RIA3 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
LOC285556D6RIA3 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
LOC285556D6RIA3 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC29.11■■■□□ 2.25
LOC285556D6RIA3 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC29.11■■■□□ 2.25
LOC285556D6RIA3 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC29.11■■■□□ 2.25
LOC285556D6RIA3 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC29.11■■■□□ 2.25
LOC285556D6RIA3 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC29.1■■■□□ 2.25
LOC285556D6RIA3 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
LOC285556D6RIA3 AL359258.2-201ENST00000564063 1566 ntBASIC29.1■■■□□ 2.25
LOC285556D6RIA3 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC29.1■■■□□ 2.25
LOC285556D6RIA3 AC026202.3-201ENST00000600805 1127 ntBASIC29.1■■■□□ 2.25
LOC285556D6RIA3 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC29.1■■■□□ 2.25
LOC285556D6RIA3 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC29.1■■■□□ 2.25
LOC285556D6RIA3 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC29.09■■■□□ 2.25
LOC285556D6RIA3 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC29.09■■■□□ 2.25
LOC285556D6RIA3 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
LOC285556D6RIA3 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
LOC285556D6RIA3 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC29.08■■■□□ 2.25
LOC285556D6RIA3 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC29.08■■■□□ 2.25
LOC285556D6RIA3 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC29.08■■■□□ 2.25
LOC285556D6RIA3 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC29.08■■■□□ 2.25
LOC285556D6RIA3 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC29.08■■■□□ 2.25
LOC285556D6RIA3 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC29.07■■■□□ 2.24
LOC285556D6RIA3 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC29.07■■■□□ 2.24
LOC285556D6RIA3 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC29.07■■■□□ 2.24
LOC285556D6RIA3 SPCS2P3-201ENST00000500401 656 ntBASIC29.07■■■□□ 2.24
LOC285556D6RIA3 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
LOC285556D6RIA3 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
LOC285556D6RIA3 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC29.06■■■□□ 2.24
LOC285556D6RIA3 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC29.06■■■□□ 2.24
LOC285556D6RIA3 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC29.06■■■□□ 2.24
LOC285556D6RIA3 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
LOC285556D6RIA3 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC29.06■■■□□ 2.24
LOC285556D6RIA3 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
LOC285556D6RIA3 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC29.06■■■□□ 2.24
LOC285556D6RIA3 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC29.06■■■□□ 2.24
LOC285556D6RIA3 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC29.05■■■□□ 2.24
LOC285556D6RIA3 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC29.05■■■□□ 2.24
LOC285556D6RIA3 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
LOC285556D6RIA3 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC29.05■■■□□ 2.24
LOC285556D6RIA3 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
LOC285556D6RIA3 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
LOC285556D6RIA3 RP9P-202ENST00000450133 1212 ntBASIC29.03■■■□□ 2.24
LOC285556D6RIA3 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC29.03■■■□□ 2.24
LOC285556D6RIA3 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC29.03■■■□□ 2.24
LOC285556D6RIA3 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC29.03■■■□□ 2.24
LOC285556D6RIA3 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC29.03■■■□□ 2.24
LOC285556D6RIA3 DUX4L18-201ENST00000553347 1267 ntBASIC29.03■■■□□ 2.24
LOC285556D6RIA3 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
LOC285556D6RIA3 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC29.01■■■□□ 2.23
LOC285556D6RIA3 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
LOC285556D6RIA3 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC29■■■□□ 2.23
LOC285556D6RIA3 AP002414.2-202ENST00000590929 1450 ntBASIC29■■■□□ 2.23
LOC285556D6RIA3 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC29■■■□□ 2.23
LOC285556D6RIA3 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
LOC285556D6RIA3 PFN2-211ENST00000489155 636 ntTSL 4 BASIC29■■■□□ 2.23
LOC285556D6RIA3 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
LOC285556D6RIA3 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
LOC285556D6RIA3 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC28.99■■■□□ 2.23
LOC285556D6RIA3 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC28.99■■■□□ 2.23
LOC285556D6RIA3 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
LOC285556D6RIA3 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
LOC285556D6RIA3 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC28.98■■■□□ 2.23
LOC285556D6RIA3 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC28.98■■■□□ 2.23
LOC285556D6RIA3 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC28.97■■■□□ 2.23
LOC285556D6RIA3 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
LOC285556D6RIA3 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC28.97■■■□□ 2.23
LOC285556D6RIA3 TRIR-205ENST00000592273 783 ntTSL 3 BASIC28.96■■■□□ 2.23
LOC285556D6RIA3 ABCB10P3-201ENST00000561950 2166 ntBASIC28.96■■■□□ 2.23
LOC285556D6RIA3 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC28.96■■■□□ 2.23
LOC285556D6RIA3 AL035685.1-201ENST00000636663 812 ntBASIC28.96■■■□□ 2.23
LOC285556D6RIA3 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC28.95■■■□□ 2.23
LOC285556D6RIA3 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC28.95■■■□□ 2.22
LOC285556D6RIA3 BEX3-202ENST00000372634 753 ntTSL 2 BASIC28.94■■■□□ 2.22
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms