Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TRDV1A0A1B0GX56 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
TRDV1A0A1B0GX56 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
TRDV1A0A1B0GX56 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TRDV1A0A1B0GX56 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
TRDV1A0A1B0GX56 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
TRDV1A0A1B0GX56 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC21.94■■□□□ 1.1
TRDV1A0A1B0GX56 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TRDV1A0A1B0GX56 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
TRDV1A0A1B0GX56 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
TRDV1A0A1B0GX56 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
TRDV1A0A1B0GX56 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TRDV1A0A1B0GX56 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
TRDV1A0A1B0GX56 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC21.92■■□□□ 1.1
TRDV1A0A1B0GX56 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
TRDV1A0A1B0GX56 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
TRDV1A0A1B0GX56 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
TRDV1A0A1B0GX56 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
TRDV1A0A1B0GX56 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.91■■□□□ 1.1
TRDV1A0A1B0GX56 AP004609.3-201ENST00000610705 1884 ntBASIC21.91■■□□□ 1.1
TRDV1A0A1B0GX56 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.91■■□□□ 1.1
TRDV1A0A1B0GX56 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TRDV1A0A1B0GX56 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
TRDV1A0A1B0GX56 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
TRDV1A0A1B0GX56 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.9■■□□□ 1.1
TRDV1A0A1B0GX56 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
TRDV1A0A1B0GX56 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
TRDV1A0A1B0GX56 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TRDV1A0A1B0GX56 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC21.89■■□□□ 1.1
TRDV1A0A1B0GX56 AC135983.2-203ENST00000454486 1613 ntBASIC21.89■■□□□ 1.09
TRDV1A0A1B0GX56 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TRDV1A0A1B0GX56 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
TRDV1A0A1B0GX56 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC21.88■■□□□ 1.09
TRDV1A0A1B0GX56 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TRDV1A0A1B0GX56 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
TRDV1A0A1B0GX56 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
TRDV1A0A1B0GX56 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
TRDV1A0A1B0GX56 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
TRDV1A0A1B0GX56 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
TRDV1A0A1B0GX56 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TRDV1A0A1B0GX56 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
TRDV1A0A1B0GX56 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TRDV1A0A1B0GX56 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
TRDV1A0A1B0GX56 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC21.86■■□□□ 1.09
TRDV1A0A1B0GX56 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
TRDV1A0A1B0GX56 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TRDV1A0A1B0GX56 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TRDV1A0A1B0GX56 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TRDV1A0A1B0GX56 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
TRDV1A0A1B0GX56 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
TRDV1A0A1B0GX56 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
TRDV1A0A1B0GX56 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.84■■□□□ 1.09
TRDV1A0A1B0GX56 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
TRDV1A0A1B0GX56 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.83■■□□□ 1.09
TRDV1A0A1B0GX56 ERN1-208ENST00000606895 2068 ntBASIC21.83■■□□□ 1.08
TRDV1A0A1B0GX56 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC21.82■■□□□ 1.08
TRDV1A0A1B0GX56 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TRDV1A0A1B0GX56 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TRDV1A0A1B0GX56 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC21.82■■□□□ 1.08
TRDV1A0A1B0GX56 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRDV1A0A1B0GX56 EBPL-202ENST00000378268 680 ntTSL 3 BASIC21.81■■□□□ 1.08
TRDV1A0A1B0GX56 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRDV1A0A1B0GX56 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.8■■□□□ 1.08
TRDV1A0A1B0GX56 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRDV1A0A1B0GX56 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRDV1A0A1B0GX56 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.8■■□□□ 1.08
TRDV1A0A1B0GX56 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRDV1A0A1B0GX56 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC21.79■■□□□ 1.08
TRDV1A0A1B0GX56 WHAMMP2-203ENST00000563942 1603 ntBASIC21.79■■□□□ 1.08
TRDV1A0A1B0GX56 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC21.79■■□□□ 1.08
TRDV1A0A1B0GX56 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC21.79■■□□□ 1.08
TRDV1A0A1B0GX56 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRDV1A0A1B0GX56 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TRDV1A0A1B0GX56 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRDV1A0A1B0GX56 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRDV1A0A1B0GX56 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC21.78■■□□□ 1.08
TRDV1A0A1B0GX56 SETD8P1-201ENST00000623146 1180 ntBASIC21.78■■□□□ 1.08
TRDV1A0A1B0GX56 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRDV1A0A1B0GX56 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TRDV1A0A1B0GX56 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRDV1A0A1B0GX56 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRDV1A0A1B0GX56 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.77■■□□□ 1.08
TRDV1A0A1B0GX56 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
TRDV1A0A1B0GX56 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRDV1A0A1B0GX56 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRDV1A0A1B0GX56 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRDV1A0A1B0GX56 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.76■■□□□ 1.07
TRDV1A0A1B0GX56 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRDV1A0A1B0GX56 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRDV1A0A1B0GX56 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.75■■□□□ 1.07
TRDV1A0A1B0GX56 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC21.75■■□□□ 1.07
TRDV1A0A1B0GX56 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRDV1A0A1B0GX56 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC21.75■■□□□ 1.07
TRDV1A0A1B0GX56 AL391121.1-201ENST00000607967 1349 ntBASIC21.75■■□□□ 1.07
TRDV1A0A1B0GX56 AC142472.1-201ENST00000612013 1741 ntBASIC21.75■■□□□ 1.07
TRDV1A0A1B0GX56 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRDV1A0A1B0GX56 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRDV1A0A1B0GX56 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRDV1A0A1B0GX56 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRDV1A0A1B0GX56 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms