Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 PEX7-203ENST00000541292 945 ntTSL 5 BASIC23.49■■□□□ 1.35
TRBV5-3A0A0A0MS03 DUSP8P4-201ENST00000399538 1761 ntBASIC23.49■■□□□ 1.35
TRBV5-3A0A0A0MS03 AP004609.3-201ENST00000610705 1884 ntBASIC23.49■■□□□ 1.35
TRBV5-3A0A0A0MS03 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
TRBV5-3A0A0A0MS03 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC23.48■■□□□ 1.35
TRBV5-3A0A0A0MS03 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
TRBV5-3A0A0A0MS03 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
TRBV5-3A0A0A0MS03 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
TRBV5-3A0A0A0MS03 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC23.47■■□□□ 1.35
TRBV5-3A0A0A0MS03 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC23.47■■□□□ 1.35
TRBV5-3A0A0A0MS03 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
TRBV5-3A0A0A0MS03 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
TRBV5-3A0A0A0MS03 AC092803.2-201ENST00000564287 1899 ntBASIC23.46■■□□□ 1.35
TRBV5-3A0A0A0MS03 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC23.45■■□□□ 1.35
TRBV5-3A0A0A0MS03 AP006261.1-201ENST00000584783 668 ntBASIC23.45■■□□□ 1.34
TRBV5-3A0A0A0MS03 AC020928.2-201ENST00000588717 2197 ntBASIC23.45■■□□□ 1.34
TRBV5-3A0A0A0MS03 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC23.45■■□□□ 1.34
TRBV5-3A0A0A0MS03 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
TRBV5-3A0A0A0MS03 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
TRBV5-3A0A0A0MS03 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC23.44■■□□□ 1.34
TRBV5-3A0A0A0MS03 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
TRBV5-3A0A0A0MS03 NRG1-221ENST00000614767 762 ntTSL 5 BASIC23.44■■□□□ 1.34
TRBV5-3A0A0A0MS03 AC087741.3-201ENST00000624270 1347 ntBASIC23.43■■□□□ 1.34
TRBV5-3A0A0A0MS03 AC110285.7-201ENST00000624417 1536 ntBASIC23.43■■□□□ 1.34
TRBV5-3A0A0A0MS03 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
TRBV5-3A0A0A0MS03 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
TRBV5-3A0A0A0MS03 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
TRBV5-3A0A0A0MS03 CIB2-204ENST00000557846 934 ntTSL 3 BASIC23.42■■□□□ 1.34
TRBV5-3A0A0A0MS03 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC23.42■■□□□ 1.34
TRBV5-3A0A0A0MS03 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
TRBV5-3A0A0A0MS03 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC23.41■■□□□ 1.34
TRBV5-3A0A0A0MS03 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC23.41■■□□□ 1.34
TRBV5-3A0A0A0MS03 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC23.41■■□□□ 1.34
TRBV5-3A0A0A0MS03 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC23.41■■□□□ 1.34
TRBV5-3A0A0A0MS03 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC23.41■■□□□ 1.34
TRBV5-3A0A0A0MS03 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC23.41■■□□□ 1.34
TRBV5-3A0A0A0MS03 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC23.41■■□□□ 1.34
TRBV5-3A0A0A0MS03 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
TRBV5-3A0A0A0MS03 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
TRBV5-3A0A0A0MS03 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC23.4■■□□□ 1.34
TRBV5-3A0A0A0MS03 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC23.4■■□□□ 1.34
TRBV5-3A0A0A0MS03 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
TRBV5-3A0A0A0MS03 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
TRBV5-3A0A0A0MS03 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC23.4■■□□□ 1.34
TRBV5-3A0A0A0MS03 AC142472.1-201ENST00000612013 1741 ntBASIC23.39■■□□□ 1.34
TRBV5-3A0A0A0MS03 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC23.39■■□□□ 1.34
TRBV5-3A0A0A0MS03 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
TRBV5-3A0A0A0MS03 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
TRBV5-3A0A0A0MS03 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
TRBV5-3A0A0A0MS03 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
TRBV5-3A0A0A0MS03 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
TRBV5-3A0A0A0MS03 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC23.38■■□□□ 1.33
TRBV5-3A0A0A0MS03 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC23.38■■□□□ 1.33
TRBV5-3A0A0A0MS03 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
TRBV5-3A0A0A0MS03 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
TRBV5-3A0A0A0MS03 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
TRBV5-3A0A0A0MS03 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TRBV5-3A0A0A0MS03 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
TRBV5-3A0A0A0MS03 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC23.36■■□□□ 1.33
TRBV5-3A0A0A0MS03 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
TRBV5-3A0A0A0MS03 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
TRBV5-3A0A0A0MS03 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
TRBV5-3A0A0A0MS03 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
TRBV5-3A0A0A0MS03 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC23.35■■□□□ 1.33
TRBV5-3A0A0A0MS03 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TRBV5-3A0A0A0MS03 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
TRBV5-3A0A0A0MS03 WHAMMP3-201ENST00000611636 1609 ntBASIC23.34■■□□□ 1.33
TRBV5-3A0A0A0MS03 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
TRBV5-3A0A0A0MS03 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
TRBV5-3A0A0A0MS03 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
TRBV5-3A0A0A0MS03 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC23.33■■□□□ 1.33
TRBV5-3A0A0A0MS03 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
TRBV5-3A0A0A0MS03 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
TRBV5-3A0A0A0MS03 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC23.33■■□□□ 1.33
TRBV5-3A0A0A0MS03 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC23.33■■□□□ 1.33
TRBV5-3A0A0A0MS03 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TRBV5-3A0A0A0MS03 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
TRBV5-3A0A0A0MS03 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TRBV5-3A0A0A0MS03 AL162393.1-201ENST00000437852 946 ntBASIC23.32■■□□□ 1.32
TRBV5-3A0A0A0MS03 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
TRBV5-3A0A0A0MS03 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
TRBV5-3A0A0A0MS03 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
TRBV5-3A0A0A0MS03 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TRBV5-3A0A0A0MS03 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC23.31■■□□□ 1.32
TRBV5-3A0A0A0MS03 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
TRBV5-3A0A0A0MS03 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
TRBV5-3A0A0A0MS03 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
TRBV5-3A0A0A0MS03 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC23.31■■□□□ 1.32
TRBV5-3A0A0A0MS03 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
TRBV5-3A0A0A0MS03 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC23.31■■□□□ 1.32
TRBV5-3A0A0A0MS03 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
TRBV5-3A0A0A0MS03 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
TRBV5-3A0A0A0MS03 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
TRBV5-3A0A0A0MS03 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
TRBV5-3A0A0A0MS03 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
TRBV5-3A0A0A0MS03 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
TRBV5-3A0A0A0MS03 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
TRBV5-3A0A0A0MS03 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC23.29■■□□□ 1.32
TRBV5-3A0A0A0MS03 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
TRBV5-3A0A0A0MS03 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC23.29■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 1248.7 ms