Protein–RNA interactions for Protein: A0A075B6U6

TRAV8-7, T-cell receptor alpha variable 8-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-7A0A075B6U6 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRAV8-7A0A075B6U6 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
TRAV8-7A0A075B6U6 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRAV8-7A0A075B6U6 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
TRAV8-7A0A075B6U6 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRAV8-7A0A075B6U6 HNRNPLP2-201ENST00000568980 1570 ntBASIC21.62■■□□□ 1.05
TRAV8-7A0A075B6U6 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
TRAV8-7A0A075B6U6 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
TRAV8-7A0A075B6U6 SUZ12P1-203ENST00000578195 985 ntBASIC21.61■■□□□ 1.05
TRAV8-7A0A075B6U6 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TRAV8-7A0A075B6U6 AC092803.2-201ENST00000564287 1899 ntBASIC21.6■■□□□ 1.05
TRAV8-7A0A075B6U6 AP004609.3-201ENST00000610705 1884 ntBASIC21.6■■□□□ 1.05
TRAV8-7A0A075B6U6 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TRAV8-7A0A075B6U6 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
TRAV8-7A0A075B6U6 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
TRAV8-7A0A075B6U6 DUSP8P4-201ENST00000399538 1761 ntBASIC21.59■■□□□ 1.05
TRAV8-7A0A075B6U6 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.58■■□□□ 1.05
TRAV8-7A0A075B6U6 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.58■■□□□ 1.05
TRAV8-7A0A075B6U6 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
TRAV8-7A0A075B6U6 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TRAV8-7A0A075B6U6 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
TRAV8-7A0A075B6U6 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC21.57■■□□□ 1.04
TRAV8-7A0A075B6U6 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRAV8-7A0A075B6U6 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TRAV8-7A0A075B6U6 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRAV8-7A0A075B6U6 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TRAV8-7A0A075B6U6 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRAV8-7A0A075B6U6 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC21.57■■□□□ 1.04
TRAV8-7A0A075B6U6 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TRAV8-7A0A075B6U6 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.56■■□□□ 1.04
TRAV8-7A0A075B6U6 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
TRAV8-7A0A075B6U6 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC21.56■■□□□ 1.04
TRAV8-7A0A075B6U6 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TRAV8-7A0A075B6U6 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.55■■□□□ 1.04
TRAV8-7A0A075B6U6 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRAV8-7A0A075B6U6 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
TRAV8-7A0A075B6U6 DUX4L28-201ENST00000623687 678 ntBASIC21.55■■□□□ 1.04
TRAV8-7A0A075B6U6 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRAV8-7A0A075B6U6 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRAV8-7A0A075B6U6 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC21.55■■□□□ 1.04
TRAV8-7A0A075B6U6 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC21.55■■□□□ 1.04
TRAV8-7A0A075B6U6 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TRAV8-7A0A075B6U6 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC21.54■■□□□ 1.04
TRAV8-7A0A075B6U6 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TRAV8-7A0A075B6U6 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
TRAV8-7A0A075B6U6 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRAV8-7A0A075B6U6 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRAV8-7A0A075B6U6 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRAV8-7A0A075B6U6 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TRAV8-7A0A075B6U6 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TRAV8-7A0A075B6U6 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
TRAV8-7A0A075B6U6 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRAV8-7A0A075B6U6 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TRAV8-7A0A075B6U6 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRAV8-7A0A075B6U6 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
TRAV8-7A0A075B6U6 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
TRAV8-7A0A075B6U6 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRAV8-7A0A075B6U6 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC21.51■■□□□ 1.03
TRAV8-7A0A075B6U6 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC21.51■■□□□ 1.03
TRAV8-7A0A075B6U6 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRAV8-7A0A075B6U6 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRAV8-7A0A075B6U6 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRAV8-7A0A075B6U6 CALM3-209ENST00000597743 577 ntTSL 4 BASIC21.5■■□□□ 1.03
TRAV8-7A0A075B6U6 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC21.5■■□□□ 1.03
TRAV8-7A0A075B6U6 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRAV8-7A0A075B6U6 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRAV8-7A0A075B6U6 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
TRAV8-7A0A075B6U6 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRAV8-7A0A075B6U6 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC21.49■■□□□ 1.03
TRAV8-7A0A075B6U6 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRAV8-7A0A075B6U6 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC21.49■■□□□ 1.03
TRAV8-7A0A075B6U6 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRAV8-7A0A075B6U6 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC21.48■■□□□ 1.03
TRAV8-7A0A075B6U6 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
TRAV8-7A0A075B6U6 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TRAV8-7A0A075B6U6 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TRAV8-7A0A075B6U6 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.47■■□□□ 1.03
TRAV8-7A0A075B6U6 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRAV8-7A0A075B6U6 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC21.47■■□□□ 1.03
TRAV8-7A0A075B6U6 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRAV8-7A0A075B6U6 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC21.47■■□□□ 1.03
TRAV8-7A0A075B6U6 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRAV8-7A0A075B6U6 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRAV8-7A0A075B6U6 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.47■■□□□ 1.03
TRAV8-7A0A075B6U6 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
TRAV8-7A0A075B6U6 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRAV8-7A0A075B6U6 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRAV8-7A0A075B6U6 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
TRAV8-7A0A075B6U6 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
TRAV8-7A0A075B6U6 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
TRAV8-7A0A075B6U6 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TRAV8-7A0A075B6U6 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRAV8-7A0A075B6U6 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC21.45■■□□□ 1.02
TRAV8-7A0A075B6U6 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC21.45■■□□□ 1.02
TRAV8-7A0A075B6U6 AC142472.1-201ENST00000612013 1741 ntBASIC21.44■■□□□ 1.02
TRAV8-7A0A075B6U6 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TRAV8-7A0A075B6U6 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRAV8-7A0A075B6U6 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21.44■■□□□ 1.02
TRAV8-7A0A075B6U6 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TRAV8-7A0A075B6U6 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms