Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC24.16■■□□□ 1.46
PCDHGA6Q9Y5G7 CEP120-209ENST00000515110 606 ntTSL 3 BASIC24.16■■□□□ 1.46
PCDHGA6Q9Y5G7 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC24.16■■□□□ 1.46
PCDHGA6Q9Y5G7 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC24.15■■□□□ 1.46
PCDHGA6Q9Y5G7 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PCDHGA6Q9Y5G7 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PCDHGA6Q9Y5G7 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
PCDHGA6Q9Y5G7 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC24.14■■□□□ 1.45
PCDHGA6Q9Y5G7 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
PCDHGA6Q9Y5G7 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC24.14■■□□□ 1.45
PCDHGA6Q9Y5G7 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
PCDHGA6Q9Y5G7 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC24.13■■□□□ 1.45
PCDHGA6Q9Y5G7 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
PCDHGA6Q9Y5G7 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
PCDHGA6Q9Y5G7 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
PCDHGA6Q9Y5G7 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PCDHGA6Q9Y5G7 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PCDHGA6Q9Y5G7 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC24.12■■□□□ 1.45
PCDHGA6Q9Y5G7 AC022413.1-201ENST00000624602 984 ntBASIC24.12■■□□□ 1.45
PCDHGA6Q9Y5G7 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
PCDHGA6Q9Y5G7 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC24.11■■□□□ 1.45
PCDHGA6Q9Y5G7 HES4-202ENST00000428771 1040 ntTSL 2 BASIC24.11■■□□□ 1.45
PCDHGA6Q9Y5G7 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
PCDHGA6Q9Y5G7 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
PCDHGA6Q9Y5G7 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
PCDHGA6Q9Y5G7 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
PCDHGA6Q9Y5G7 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC24.09■■□□□ 1.45
PCDHGA6Q9Y5G7 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC24.09■■□□□ 1.45
PCDHGA6Q9Y5G7 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
PCDHGA6Q9Y5G7 CHST11-203ENST00000547956 936 ntTSL 2 BASIC24.09■■□□□ 1.45
PCDHGA6Q9Y5G7 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
PCDHGA6Q9Y5G7 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC24.09■■□□□ 1.45
PCDHGA6Q9Y5G7 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
PCDHGA6Q9Y5G7 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
PCDHGA6Q9Y5G7 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
PCDHGA6Q9Y5G7 AL139393.2-201ENST00000608721 2025 ntBASIC24.08■■□□□ 1.45
PCDHGA6Q9Y5G7 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
PCDHGA6Q9Y5G7 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
PCDHGA6Q9Y5G7 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC24.07■■□□□ 1.44
PCDHGA6Q9Y5G7 AC110285.7-201ENST00000624417 1536 ntBASIC24.07■■□□□ 1.44
PCDHGA6Q9Y5G7 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
PCDHGA6Q9Y5G7 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
PCDHGA6Q9Y5G7 AC148477.6-201ENST00000623746 465 ntBASIC24.07■■□□□ 1.44
PCDHGA6Q9Y5G7 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC24.07■■□□□ 1.44
PCDHGA6Q9Y5G7 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC24.07■■□□□ 1.44
PCDHGA6Q9Y5G7 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC24.07■■□□□ 1.44
PCDHGA6Q9Y5G7 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
PCDHGA6Q9Y5G7 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
PCDHGA6Q9Y5G7 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
PCDHGA6Q9Y5G7 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
PCDHGA6Q9Y5G7 DRD5P2-201ENST00000421395 2012 ntBASIC24.06■■□□□ 1.44
PCDHGA6Q9Y5G7 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC24.05■■□□□ 1.44
PCDHGA6Q9Y5G7 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC24.05■■□□□ 1.44
PCDHGA6Q9Y5G7 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC24.04■■□□□ 1.44
PCDHGA6Q9Y5G7 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC24.03■■□□□ 1.44
PCDHGA6Q9Y5G7 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC24.03■■□□□ 1.44
PCDHGA6Q9Y5G7 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
PCDHGA6Q9Y5G7 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC24.02■■□□□ 1.44
PCDHGA6Q9Y5G7 RPS2-210ENST00000530225 765 ntTSL 2 BASIC24.02■■□□□ 1.44
PCDHGA6Q9Y5G7 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC24.02■■□□□ 1.44
PCDHGA6Q9Y5G7 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
PCDHGA6Q9Y5G7 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
PCDHGA6Q9Y5G7 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC24.01■■□□□ 1.43
PCDHGA6Q9Y5G7 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC24.01■■□□□ 1.43
PCDHGA6Q9Y5G7 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
PCDHGA6Q9Y5G7 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC24■■□□□ 1.43
PCDHGA6Q9Y5G7 AL121749.1-202ENST00000609313 2153 ntBASIC24■■□□□ 1.43
PCDHGA6Q9Y5G7 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC24■■□□□ 1.43
PCDHGA6Q9Y5G7 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
PCDHGA6Q9Y5G7 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC23.99■■□□□ 1.43
PCDHGA6Q9Y5G7 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
PCDHGA6Q9Y5G7 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
PCDHGA6Q9Y5G7 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC23.99■■□□□ 1.43
PCDHGA6Q9Y5G7 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
PCDHGA6Q9Y5G7 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
PCDHGA6Q9Y5G7 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
PCDHGA6Q9Y5G7 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
PCDHGA6Q9Y5G7 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
PCDHGA6Q9Y5G7 NTF6A-201ENST00000591175 560 ntBASIC23.98■■□□□ 1.43
PCDHGA6Q9Y5G7 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC23.97■■□□□ 1.43
PCDHGA6Q9Y5G7 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
PCDHGA6Q9Y5G7 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC23.97■■□□□ 1.43
PCDHGA6Q9Y5G7 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
PCDHGA6Q9Y5G7 MEST-211ENST00000437945 1455 ntTSL 5 BASIC23.97■■□□□ 1.43
PCDHGA6Q9Y5G7 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
PCDHGA6Q9Y5G7 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC23.97■■□□□ 1.43
PCDHGA6Q9Y5G7 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC23.97■■□□□ 1.43
PCDHGA6Q9Y5G7 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC23.97■■□□□ 1.43
PCDHGA6Q9Y5G7 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PCDHGA6Q9Y5G7 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PCDHGA6Q9Y5G7 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
PCDHGA6Q9Y5G7 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
PCDHGA6Q9Y5G7 PEX7-203ENST00000541292 945 ntTSL 5 BASIC23.96■■□□□ 1.43
PCDHGA6Q9Y5G7 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC23.96■■□□□ 1.43
PCDHGA6Q9Y5G7 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
PCDHGA6Q9Y5G7 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PCDHGA6Q9Y5G7 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC23.96■■□□□ 1.43
PCDHGA6Q9Y5G7 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
PCDHGA6Q9Y5G7 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
PCDHGA6Q9Y5G7 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms