Protein–RNA interactions for Protein: Q9NRA1

PDGFC, Platelet-derived growth factor C, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFCQ9NRA1 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
PDGFCQ9NRA1 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
PDGFCQ9NRA1 ECEL1P2-201ENST00000461596 1295 ntBASIC28.58■■■□□ 2.17
PDGFCQ9NRA1 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC28.57■■■□□ 2.16
PDGFCQ9NRA1 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
PDGFCQ9NRA1 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC28.57■■■□□ 2.16
PDGFCQ9NRA1 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC28.57■■■□□ 2.16
PDGFCQ9NRA1 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
PDGFCQ9NRA1 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
PDGFCQ9NRA1 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
PDGFCQ9NRA1 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
PDGFCQ9NRA1 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC28.55■■■□□ 2.16
PDGFCQ9NRA1 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC28.55■■■□□ 2.16
PDGFCQ9NRA1 AL157400.5-201ENST00000507624 621 ntBASIC28.55■■■□□ 2.16
PDGFCQ9NRA1 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
PDGFCQ9NRA1 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC28.54■■■□□ 2.16
PDGFCQ9NRA1 KRT18P60-201ENST00000312876 1297 ntBASIC28.54■■■□□ 2.16
PDGFCQ9NRA1 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
PDGFCQ9NRA1 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC28.53■■■□□ 2.16
PDGFCQ9NRA1 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC28.53■■■□□ 2.16
PDGFCQ9NRA1 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
PDGFCQ9NRA1 AC126177.7-201ENST00000547904 679 ntBASIC28.52■■■□□ 2.16
PDGFCQ9NRA1 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
PDGFCQ9NRA1 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
PDGFCQ9NRA1 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
PDGFCQ9NRA1 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC28.5■■■□□ 2.15
PDGFCQ9NRA1 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC28.5■■■□□ 2.15
PDGFCQ9NRA1 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
PDGFCQ9NRA1 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC28.49■■■□□ 2.15
PDGFCQ9NRA1 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC28.48■■■□□ 2.15
PDGFCQ9NRA1 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
PDGFCQ9NRA1 AC004987.1-201ENST00000428627 508 ntBASIC28.47■■■□□ 2.15
PDGFCQ9NRA1 GFER-205ENST00000569451 517 ntTSL 5 BASIC28.47■■■□□ 2.15
PDGFCQ9NRA1 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC28.47■■■□□ 2.15
PDGFCQ9NRA1 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC28.47■■■□□ 2.15
PDGFCQ9NRA1 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC28.46■■■□□ 2.15
PDGFCQ9NRA1 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
PDGFCQ9NRA1 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC28.46■■■□□ 2.15
PDGFCQ9NRA1 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
PDGFCQ9NRA1 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
PDGFCQ9NRA1 AL139393.2-201ENST00000608721 2025 ntBASIC28.46■■■□□ 2.15
PDGFCQ9NRA1 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC28.45■■■□□ 2.15
PDGFCQ9NRA1 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC28.45■■■□□ 2.14
PDGFCQ9NRA1 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC28.45■■■□□ 2.14
PDGFCQ9NRA1 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC28.45■■■□□ 2.14
PDGFCQ9NRA1 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC28.45■■■□□ 2.14
PDGFCQ9NRA1 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC28.45■■■□□ 2.14
PDGFCQ9NRA1 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
PDGFCQ9NRA1 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
PDGFCQ9NRA1 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC28.44■■■□□ 2.14
PDGFCQ9NRA1 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
PDGFCQ9NRA1 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC28.43■■■□□ 2.14
PDGFCQ9NRA1 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC28.43■■■□□ 2.14
PDGFCQ9NRA1 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC28.43■■■□□ 2.14
PDGFCQ9NRA1 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
PDGFCQ9NRA1 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
PDGFCQ9NRA1 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC28.42■■■□□ 2.14
PDGFCQ9NRA1 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
PDGFCQ9NRA1 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC28.42■■■□□ 2.14
PDGFCQ9NRA1 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
PDGFCQ9NRA1 ATP5G2P3-201ENST00000429083 425 ntBASIC28.42■■■□□ 2.14
PDGFCQ9NRA1 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
PDGFCQ9NRA1 ABCB10P3-201ENST00000561950 2166 ntBASIC28.42■■■□□ 2.14
PDGFCQ9NRA1 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC28.42■■■□□ 2.14
PDGFCQ9NRA1 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC28.41■■■□□ 2.14
PDGFCQ9NRA1 TSPY13P-201ENST00000338964 914 ntBASIC28.41■■■□□ 2.14
PDGFCQ9NRA1 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC28.41■■■□□ 2.14
PDGFCQ9NRA1 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
PDGFCQ9NRA1 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC28.4■■■□□ 2.14
PDGFCQ9NRA1 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
PDGFCQ9NRA1 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC28.4■■■□□ 2.14
PDGFCQ9NRA1 AL359258.2-201ENST00000564063 1566 ntBASIC28.4■■■□□ 2.14
PDGFCQ9NRA1 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
PDGFCQ9NRA1 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC28.39■■■□□ 2.14
PDGFCQ9NRA1 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC28.39■■■□□ 2.14
PDGFCQ9NRA1 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC28.39■■■□□ 2.13
PDGFCQ9NRA1 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
PDGFCQ9NRA1 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC28.38■■■□□ 2.13
PDGFCQ9NRA1 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
PDGFCQ9NRA1 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC28.37■■■□□ 2.13
PDGFCQ9NRA1 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
PDGFCQ9NRA1 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC28.37■■■□□ 2.13
PDGFCQ9NRA1 AC007029.1-201ENST00000604183 313 ntBASIC28.37■■■□□ 2.13
PDGFCQ9NRA1 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC28.37■■■□□ 2.13
PDGFCQ9NRA1 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC28.37■■■□□ 2.13
PDGFCQ9NRA1 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC28.36■■■□□ 2.13
PDGFCQ9NRA1 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
PDGFCQ9NRA1 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC28.35■■■□□ 2.13
PDGFCQ9NRA1 GUK1-208ENST00000366728 842 ntTSL 2 BASIC28.35■■■□□ 2.13
PDGFCQ9NRA1 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC28.35■■■□□ 2.13
PDGFCQ9NRA1 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC28.35■■■□□ 2.13
PDGFCQ9NRA1 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC28.35■■■□□ 2.13
PDGFCQ9NRA1 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
PDGFCQ9NRA1 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC28.34■■■□□ 2.13
PDGFCQ9NRA1 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC28.34■■■□□ 2.13
PDGFCQ9NRA1 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC28.34■■■□□ 2.13
PDGFCQ9NRA1 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC28.34■■■□□ 2.13
PDGFCQ9NRA1 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC28.33■■■□□ 2.13
PDGFCQ9NRA1 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
PDGFCQ9NRA1 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC28.33■■■□□ 2.13
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms