Protein–RNA interactions for Protein: Q9H7M6

ZSWIM4, Zinc finger SWIM domain-containing protein 4, humanhuman

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM4Q9H7M6 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
ZSWIM4Q9H7M6 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
ZSWIM4Q9H7M6 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC28.39■■■□□ 2.14
ZSWIM4Q9H7M6 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC28.39■■■□□ 2.13
ZSWIM4Q9H7M6 RPS2-210ENST00000530225 765 ntTSL 2 BASIC28.38■■■□□ 2.13
ZSWIM4Q9H7M6 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
ZSWIM4Q9H7M6 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC28.37■■■□□ 2.13
ZSWIM4Q9H7M6 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC28.37■■■□□ 2.13
ZSWIM4Q9H7M6 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC28.37■■■□□ 2.13
ZSWIM4Q9H7M6 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
ZSWIM4Q9H7M6 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC28.36■■■□□ 2.13
ZSWIM4Q9H7M6 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
ZSWIM4Q9H7M6 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
ZSWIM4Q9H7M6 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC28.36■■■□□ 2.13
ZSWIM4Q9H7M6 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC28.36■■■□□ 2.13
ZSWIM4Q9H7M6 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
ZSWIM4Q9H7M6 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC28.35■■■□□ 2.13
ZSWIM4Q9H7M6 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC28.35■■■□□ 2.13
ZSWIM4Q9H7M6 AP002414.2-202ENST00000590929 1450 ntBASIC28.34■■■□□ 2.13
ZSWIM4Q9H7M6 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
ZSWIM4Q9H7M6 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC28.34■■■□□ 2.13
ZSWIM4Q9H7M6 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC28.32■■■□□ 2.12
ZSWIM4Q9H7M6 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
ZSWIM4Q9H7M6 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
ZSWIM4Q9H7M6 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
ZSWIM4Q9H7M6 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC28.3■■■□□ 2.12
ZSWIM4Q9H7M6 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
ZSWIM4Q9H7M6 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC28.3■■■□□ 2.12
ZSWIM4Q9H7M6 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
ZSWIM4Q9H7M6 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC28.29■■■□□ 2.12
ZSWIM4Q9H7M6 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC28.29■■■□□ 2.12
ZSWIM4Q9H7M6 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC28.29■■■□□ 2.12
ZSWIM4Q9H7M6 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
ZSWIM4Q9H7M6 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
ZSWIM4Q9H7M6 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
ZSWIM4Q9H7M6 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC28.28■■■□□ 2.12
ZSWIM4Q9H7M6 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC28.27■■■□□ 2.12
ZSWIM4Q9H7M6 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
ZSWIM4Q9H7M6 DRD5P2-201ENST00000421395 2012 ntBASIC28.27■■■□□ 2.12
ZSWIM4Q9H7M6 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
ZSWIM4Q9H7M6 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
ZSWIM4Q9H7M6 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC28.26■■■□□ 2.11
ZSWIM4Q9H7M6 PROC-203ENST00000409048 1586 ntTSL 5 BASIC28.26■■■□□ 2.11
ZSWIM4Q9H7M6 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
ZSWIM4Q9H7M6 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
ZSWIM4Q9H7M6 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC28.26■■■□□ 2.11
ZSWIM4Q9H7M6 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
ZSWIM4Q9H7M6 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC28.25■■■□□ 2.11
ZSWIM4Q9H7M6 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
ZSWIM4Q9H7M6 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
ZSWIM4Q9H7M6 CHST11-203ENST00000547956 936 ntTSL 2 BASIC28.25■■■□□ 2.11
ZSWIM4Q9H7M6 AC148477.6-201ENST00000623746 465 ntBASIC28.25■■■□□ 2.11
ZSWIM4Q9H7M6 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
ZSWIM4Q9H7M6 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
ZSWIM4Q9H7M6 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
ZSWIM4Q9H7M6 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
ZSWIM4Q9H7M6 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC28.24■■■□□ 2.11
ZSWIM4Q9H7M6 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC28.24■■■□□ 2.11
ZSWIM4Q9H7M6 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC28.24■■■□□ 2.11
ZSWIM4Q9H7M6 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC28.23■■■□□ 2.11
ZSWIM4Q9H7M6 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
ZSWIM4Q9H7M6 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC28.23■■■□□ 2.11
ZSWIM4Q9H7M6 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
ZSWIM4Q9H7M6 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
ZSWIM4Q9H7M6 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
ZSWIM4Q9H7M6 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
ZSWIM4Q9H7M6 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
ZSWIM4Q9H7M6 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC28.23■■■□□ 2.11
ZSWIM4Q9H7M6 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC28.23■■■□□ 2.11
ZSWIM4Q9H7M6 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC28.23■■■□□ 2.11
ZSWIM4Q9H7M6 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
ZSWIM4Q9H7M6 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
ZSWIM4Q9H7M6 AC142086.6-201ENST00000621154 1765 ntBASIC28.22■■■□□ 2.11
ZSWIM4Q9H7M6 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC28.22■■■□□ 2.11
ZSWIM4Q9H7M6 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
ZSWIM4Q9H7M6 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC28.22■■■□□ 2.11
ZSWIM4Q9H7M6 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC28.22■■■□□ 2.11
ZSWIM4Q9H7M6 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
ZSWIM4Q9H7M6 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC28.21■■■□□ 2.11
ZSWIM4Q9H7M6 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC28.21■■■□□ 2.11
ZSWIM4Q9H7M6 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC28.2■■■□□ 2.1
ZSWIM4Q9H7M6 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC28.2■■■□□ 2.1
ZSWIM4Q9H7M6 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC28.2■■■□□ 2.1
ZSWIM4Q9H7M6 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
ZSWIM4Q9H7M6 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC28.2■■■□□ 2.1
ZSWIM4Q9H7M6 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
ZSWIM4Q9H7M6 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC28.19■■■□□ 2.1
ZSWIM4Q9H7M6 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC28.19■■■□□ 2.1
ZSWIM4Q9H7M6 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC28.19■■■□□ 2.1
ZSWIM4Q9H7M6 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC28.19■■■□□ 2.1
ZSWIM4Q9H7M6 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC28.19■■■□□ 2.1
ZSWIM4Q9H7M6 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC28.19■■■□□ 2.1
ZSWIM4Q9H7M6 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC28.19■■■□□ 2.1
ZSWIM4Q9H7M6 MIR219A2-201ENST00000608502 1504 ntBASIC28.18■■■□□ 2.1
ZSWIM4Q9H7M6 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
ZSWIM4Q9H7M6 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
ZSWIM4Q9H7M6 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC28.18■■■□□ 2.1
ZSWIM4Q9H7M6 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC28.17■■■□□ 2.1
ZSWIM4Q9H7M6 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC28.17■■■□□ 2.1
ZSWIM4Q9H7M6 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms