Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC33.3■■■□□ 2.92
PCDH11XQ9BZA7 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC33.3■■■□□ 2.92
PCDH11XQ9BZA7 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC33.3■■■□□ 2.92
PCDH11XQ9BZA7 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC33.3■■■□□ 2.92
PCDH11XQ9BZA7 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC33.3■■■□□ 2.92
PCDH11XQ9BZA7 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC33.29■■■□□ 2.92
PCDH11XQ9BZA7 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC33.29■■■□□ 2.92
PCDH11XQ9BZA7 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC33.29■■■□□ 2.92
PCDH11XQ9BZA7 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC33.29■■■□□ 2.92
PCDH11XQ9BZA7 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC33.29■■■□□ 2.92
PCDH11XQ9BZA7 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC33.28■■■□□ 2.92
PCDH11XQ9BZA7 AP004833.2-201ENST00000532228 1454 ntBASIC33.28■■■□□ 2.92
PCDH11XQ9BZA7 AC007029.1-201ENST00000604183 313 ntBASIC33.28■■■□□ 2.92
PCDH11XQ9BZA7 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC33.27■■■□□ 2.92
PCDH11XQ9BZA7 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC33.26■■■□□ 2.91
PCDH11XQ9BZA7 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC33.25■■■□□ 2.91
PCDH11XQ9BZA7 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC33.25■■■□□ 2.91
PCDH11XQ9BZA7 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC33.25■■■□□ 2.91
PCDH11XQ9BZA7 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC33.25■■■□□ 2.91
PCDH11XQ9BZA7 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC33.25■■■□□ 2.91
PCDH11XQ9BZA7 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC33.25■■■□□ 2.91
PCDH11XQ9BZA7 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC33.23■■■□□ 2.91
PCDH11XQ9BZA7 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC33.23■■■□□ 2.91
PCDH11XQ9BZA7 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC33.23■■■□□ 2.91
PCDH11XQ9BZA7 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC33.23■■■□□ 2.91
PCDH11XQ9BZA7 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC33.22■■■□□ 2.91
PCDH11XQ9BZA7 ST7-AS1-201ENST00000456775 1889 ntBASIC33.21■■■□□ 2.91
PCDH11XQ9BZA7 REST-210ENST00000638187 1334 ntTSL 5 BASIC33.21■■■□□ 2.91
PCDH11XQ9BZA7 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
PCDH11XQ9BZA7 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
PCDH11XQ9BZA7 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
PCDH11XQ9BZA7 RARRES2P1-201ENST00000474487 481 ntBASIC33.2■■■□□ 2.91
PCDH11XQ9BZA7 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC33.2■■■□□ 2.91
PCDH11XQ9BZA7 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC33.19■■■□□ 2.9
PCDH11XQ9BZA7 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC33.19■■■□□ 2.9
PCDH11XQ9BZA7 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC33.19■■■□□ 2.9
PCDH11XQ9BZA7 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC33.19■■■□□ 2.9
PCDH11XQ9BZA7 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC33.18■■■□□ 2.9
PCDH11XQ9BZA7 AC129492.7-201ENST00000622992 756 ntBASIC33.18■■■□□ 2.9
PCDH11XQ9BZA7 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC33.17■■■□□ 2.9
PCDH11XQ9BZA7 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC33.17■■■□□ 2.9
PCDH11XQ9BZA7 AC009831.1-201ENST00000580420 1582 ntBASIC33.16■■■□□ 2.9
PCDH11XQ9BZA7 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC33.16■■■□□ 2.9
PCDH11XQ9BZA7 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC33.15■■■□□ 2.9
PCDH11XQ9BZA7 AC100797.4-201ENST00000631653 1827 ntBASIC33.15■■■□□ 2.9
PCDH11XQ9BZA7 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC33.15■■■□□ 2.9
PCDH11XQ9BZA7 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC33.15■■■□□ 2.9
PCDH11XQ9BZA7 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC33.14■■■□□ 2.9
PCDH11XQ9BZA7 AL592293.1-201ENST00000502889 1188 ntBASIC33.14■■■□□ 2.9
PCDH11XQ9BZA7 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
PCDH11XQ9BZA7 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC33.14■■■□□ 2.9
PCDH11XQ9BZA7 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.89
PCDH11XQ9BZA7 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
PCDH11XQ9BZA7 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
PCDH11XQ9BZA7 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC33.13■■■□□ 2.89
PCDH11XQ9BZA7 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC33.13■■■□□ 2.89
PCDH11XQ9BZA7 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
PCDH11XQ9BZA7 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
PCDH11XQ9BZA7 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC33.11■■■□□ 2.89
PCDH11XQ9BZA7 AC133552.2-201ENST00000619106 1032 ntBASIC33.11■■■□□ 2.89
PCDH11XQ9BZA7 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC33.11■■■□□ 2.89
PCDH11XQ9BZA7 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
PCDH11XQ9BZA7 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC33.1■■■□□ 2.89
PCDH11XQ9BZA7 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC33.09■■■□□ 2.89
PCDH11XQ9BZA7 AL359258.2-201ENST00000564063 1566 ntBASIC33.09■■■□□ 2.89
PCDH11XQ9BZA7 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC33.09■■■□□ 2.89
PCDH11XQ9BZA7 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC33.08■■■□□ 2.89
PCDH11XQ9BZA7 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC33.08■■■□□ 2.89
PCDH11XQ9BZA7 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC33.07■■■□□ 2.88
PCDH11XQ9BZA7 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC33.07■■■□□ 2.88
PCDH11XQ9BZA7 SMPD5-203ENST00000639008 1464 ntBASIC33.07■■■□□ 2.88
PCDH11XQ9BZA7 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC33.07■■■□□ 2.88
PCDH11XQ9BZA7 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC33.07■■■□□ 2.88
PCDH11XQ9BZA7 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
PCDH11XQ9BZA7 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC33.06■■■□□ 2.88
PCDH11XQ9BZA7 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC33.06■■■□□ 2.88
PCDH11XQ9BZA7 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC33.06■■■□□ 2.88
PCDH11XQ9BZA7 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC33.06■■■□□ 2.88
PCDH11XQ9BZA7 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC33.05■■■□□ 2.88
PCDH11XQ9BZA7 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC33.05■■■□□ 2.88
PCDH11XQ9BZA7 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC33.05■■■□□ 2.88
PCDH11XQ9BZA7 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC33.04■■■□□ 2.88
PCDH11XQ9BZA7 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
PCDH11XQ9BZA7 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC33.04■■■□□ 2.88
PCDH11XQ9BZA7 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC33.04■■■□□ 2.88
PCDH11XQ9BZA7 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
PCDH11XQ9BZA7 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC33.04■■■□□ 2.88
PCDH11XQ9BZA7 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
PCDH11XQ9BZA7 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC33.03■■■□□ 2.88
PCDH11XQ9BZA7 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC33.03■■■□□ 2.88
PCDH11XQ9BZA7 DUX4L18-201ENST00000553347 1267 ntBASIC33.03■■■□□ 2.88
PCDH11XQ9BZA7 AC025884.2-201ENST00000553429 711 ntBASIC33.03■■■□□ 2.88
PCDH11XQ9BZA7 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC33.03■■■□□ 2.88
PCDH11XQ9BZA7 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC33.03■■■□□ 2.88
PCDH11XQ9BZA7 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC33.02■■■□□ 2.88
PCDH11XQ9BZA7 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC33.02■■■□□ 2.88
PCDH11XQ9BZA7 HES4-204ENST00000484667 667 ntTSL 3 BASIC33.02■■■□□ 2.88
PCDH11XQ9BZA7 AC026202.3-201ENST00000600805 1127 ntBASIC33.02■■■□□ 2.88
PCDH11XQ9BZA7 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC33.01■■■□□ 2.88
PCDH11XQ9BZA7 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC33.01■■■□□ 2.87
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms