Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
CASD1Q96PB1 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC27.29■■□□□ 1.96
CASD1Q96PB1 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
CASD1Q96PB1 AL157400.5-201ENST00000507624 621 ntBASIC27.29■■□□□ 1.96
CASD1Q96PB1 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC27.29■■□□□ 1.96
CASD1Q96PB1 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC27.29■■□□□ 1.96
CASD1Q96PB1 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC27.28■■□□□ 1.96
CASD1Q96PB1 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC27.28■■□□□ 1.96
CASD1Q96PB1 KRT18P60-201ENST00000312876 1297 ntBASIC27.28■■□□□ 1.96
CASD1Q96PB1 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
CASD1Q96PB1 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
CASD1Q96PB1 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
CASD1Q96PB1 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC27.26■■□□□ 1.96
CASD1Q96PB1 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC27.26■■□□□ 1.95
CASD1Q96PB1 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
CASD1Q96PB1 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC27.25■■□□□ 1.95
CASD1Q96PB1 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC27.25■■□□□ 1.95
CASD1Q96PB1 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC27.25■■□□□ 1.95
CASD1Q96PB1 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
CASD1Q96PB1 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC27.25■■□□□ 1.95
CASD1Q96PB1 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
CASD1Q96PB1 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
CASD1Q96PB1 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC27.24■■□□□ 1.95
CASD1Q96PB1 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC27.24■■□□□ 1.95
CASD1Q96PB1 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
CASD1Q96PB1 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC27.24■■□□□ 1.95
CASD1Q96PB1 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
CASD1Q96PB1 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC27.23■■□□□ 1.95
CASD1Q96PB1 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
CASD1Q96PB1 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC27.23■■□□□ 1.95
CASD1Q96PB1 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
CASD1Q96PB1 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
CASD1Q96PB1 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
CASD1Q96PB1 AC004987.1-201ENST00000428627 508 ntBASIC27.21■■□□□ 1.95
CASD1Q96PB1 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
CASD1Q96PB1 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC27.21■■□□□ 1.95
CASD1Q96PB1 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC27.21■■□□□ 1.95
CASD1Q96PB1 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
CASD1Q96PB1 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC27.2■■□□□ 1.95
CASD1Q96PB1 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC27.19■■□□□ 1.94
CASD1Q96PB1 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC27.19■■□□□ 1.94
CASD1Q96PB1 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC27.19■■□□□ 1.94
CASD1Q96PB1 TSPY13P-201ENST00000338964 914 ntBASIC27.19■■□□□ 1.94
CASD1Q96PB1 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
CASD1Q96PB1 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC27.19■■□□□ 1.94
CASD1Q96PB1 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC27.19■■□□□ 1.94
CASD1Q96PB1 GFER-205ENST00000569451 517 ntTSL 5 BASIC27.19■■□□□ 1.94
CASD1Q96PB1 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
CASD1Q96PB1 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC27.18■■□□□ 1.94
CASD1Q96PB1 ATP5G2P3-201ENST00000429083 425 ntBASIC27.18■■□□□ 1.94
CASD1Q96PB1 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC27.17■■□□□ 1.94
CASD1Q96PB1 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
CASD1Q96PB1 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
CASD1Q96PB1 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC27.17■■□□□ 1.94
CASD1Q96PB1 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
CASD1Q96PB1 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC27.16■■□□□ 1.94
CASD1Q96PB1 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
CASD1Q96PB1 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
CASD1Q96PB1 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
CASD1Q96PB1 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC27.16■■□□□ 1.94
CASD1Q96PB1 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC27.15■■□□□ 1.94
CASD1Q96PB1 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC27.15■■□□□ 1.94
CASD1Q96PB1 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
CASD1Q96PB1 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC27.15■■□□□ 1.94
CASD1Q96PB1 AC007029.1-201ENST00000604183 313 ntBASIC27.15■■□□□ 1.94
CASD1Q96PB1 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC27.14■■□□□ 1.94
CASD1Q96PB1 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC27.14■■□□□ 1.94
CASD1Q96PB1 AL139393.2-201ENST00000608721 2025 ntBASIC27.14■■□□□ 1.93
CASD1Q96PB1 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
CASD1Q96PB1 AL359258.2-201ENST00000564063 1566 ntBASIC27.14■■□□□ 1.93
CASD1Q96PB1 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC27.13■■□□□ 1.93
CASD1Q96PB1 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
CASD1Q96PB1 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC27.13■■□□□ 1.93
CASD1Q96PB1 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC27.12■■□□□ 1.93
CASD1Q96PB1 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
CASD1Q96PB1 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC27.12■■□□□ 1.93
CASD1Q96PB1 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC27.12■■□□□ 1.93
CASD1Q96PB1 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC27.11■■□□□ 1.93
CASD1Q96PB1 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
CASD1Q96PB1 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC27.1■■□□□ 1.93
CASD1Q96PB1 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
CASD1Q96PB1 GUK1-208ENST00000366728 842 ntTSL 2 BASIC27.1■■□□□ 1.93
CASD1Q96PB1 REST-210ENST00000638187 1334 ntTSL 5 BASIC27.1■■□□□ 1.93
CASD1Q96PB1 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC27.09■■□□□ 1.93
CASD1Q96PB1 SMPD5-203ENST00000639008 1464 ntBASIC27.09■■□□□ 1.93
CASD1Q96PB1 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
CASD1Q96PB1 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC27.09■■□□□ 1.93
CASD1Q96PB1 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC27.08■■□□□ 1.93
CASD1Q96PB1 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
CASD1Q96PB1 ABCB10P3-201ENST00000561950 2166 ntBASIC27.08■■□□□ 1.93
CASD1Q96PB1 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC27.08■■□□□ 1.93
CASD1Q96PB1 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC27.08■■□□□ 1.93
CASD1Q96PB1 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC27.08■■□□□ 1.93
CASD1Q96PB1 AC009831.1-201ENST00000580420 1582 ntBASIC27.08■■□□□ 1.93
CASD1Q96PB1 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC27.08■■□□□ 1.92
CASD1Q96PB1 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC27.07■■□□□ 1.92
CASD1Q96PB1 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
CASD1Q96PB1 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
CASD1Q96PB1 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC27.06■■□□□ 1.92
CASD1Q96PB1 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms