Protein–RNA interactions for Protein: Q96MV1

TMEM56, Transmembrane protein 56, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56Q96MV1 AC136428.2-201ENST00000563187 214 ntBASIC20.62■□□□□ 0.89
TMEM56Q96MV1 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC20.62■□□□□ 0.89
TMEM56Q96MV1 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TMEM56Q96MV1 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC20.62■□□□□ 0.89
TMEM56Q96MV1 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
TMEM56Q96MV1 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TMEM56Q96MV1 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC20.61■□□□□ 0.89
TMEM56Q96MV1 MEST-211ENST00000437945 1455 ntTSL 5 BASIC20.61■□□□□ 0.89
TMEM56Q96MV1 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
TMEM56Q96MV1 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC20.6■□□□□ 0.89
TMEM56Q96MV1 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TMEM56Q96MV1 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TMEM56Q96MV1 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC20.6■□□□□ 0.89
TMEM56Q96MV1 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC20.6■□□□□ 0.89
TMEM56Q96MV1 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TMEM56Q96MV1 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC20.59■□□□□ 0.89
TMEM56Q96MV1 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
TMEM56Q96MV1 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TMEM56Q96MV1 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TMEM56Q96MV1 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
TMEM56Q96MV1 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC20.57■□□□□ 0.88
TMEM56Q96MV1 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC20.57■□□□□ 0.88
TMEM56Q96MV1 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TMEM56Q96MV1 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC20.56■□□□□ 0.88
TMEM56Q96MV1 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TMEM56Q96MV1 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
TMEM56Q96MV1 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC20.56■□□□□ 0.88
TMEM56Q96MV1 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
TMEM56Q96MV1 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC20.55■□□□□ 0.88
TMEM56Q96MV1 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
TMEM56Q96MV1 AC020928.2-201ENST00000588717 2197 ntBASIC20.55■□□□□ 0.88
TMEM56Q96MV1 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TMEM56Q96MV1 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TMEM56Q96MV1 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TMEM56Q96MV1 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TMEM56Q96MV1 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TMEM56Q96MV1 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC20.54■□□□□ 0.88
TMEM56Q96MV1 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC20.54■□□□□ 0.88
TMEM56Q96MV1 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TMEM56Q96MV1 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
TMEM56Q96MV1 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
TMEM56Q96MV1 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TMEM56Q96MV1 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TMEM56Q96MV1 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TMEM56Q96MV1 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.52■□□□□ 0.88
TMEM56Q96MV1 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
TMEM56Q96MV1 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
TMEM56Q96MV1 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TMEM56Q96MV1 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
TMEM56Q96MV1 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
TMEM56Q96MV1 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
TMEM56Q96MV1 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC20.51■□□□□ 0.87
TMEM56Q96MV1 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TMEM56Q96MV1 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
TMEM56Q96MV1 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TMEM56Q96MV1 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TMEM56Q96MV1 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC20.5■□□□□ 0.87
TMEM56Q96MV1 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TMEM56Q96MV1 RPS2-209ENST00000529806 993 ntTSL 3 BASIC20.5■□□□□ 0.87
TMEM56Q96MV1 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
TMEM56Q96MV1 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC20.5■□□□□ 0.87
TMEM56Q96MV1 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TMEM56Q96MV1 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
TMEM56Q96MV1 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TMEM56Q96MV1 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
TMEM56Q96MV1 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC20.5■□□□□ 0.87
TMEM56Q96MV1 AC135983.2-203ENST00000454486 1613 ntBASIC20.49■□□□□ 0.87
TMEM56Q96MV1 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
TMEM56Q96MV1 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TMEM56Q96MV1 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TMEM56Q96MV1 MIR762-201ENST00000390236 83 ntBASIC20.49■□□□□ 0.87
TMEM56Q96MV1 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
TMEM56Q96MV1 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TMEM56Q96MV1 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
TMEM56Q96MV1 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
TMEM56Q96MV1 CHML-205ENST00000638160 705 ntTSL 3 BASIC20.48■□□□□ 0.87
TMEM56Q96MV1 DUSP8P4-201ENST00000399538 1761 ntBASIC20.48■□□□□ 0.87
TMEM56Q96MV1 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TMEM56Q96MV1 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.47■□□□□ 0.87
TMEM56Q96MV1 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
TMEM56Q96MV1 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TMEM56Q96MV1 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
TMEM56Q96MV1 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TMEM56Q96MV1 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
TMEM56Q96MV1 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TMEM56Q96MV1 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TMEM56Q96MV1 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TMEM56Q96MV1 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC20.46■□□□□ 0.87
TMEM56Q96MV1 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC20.45■□□□□ 0.86
TMEM56Q96MV1 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC20.45■□□□□ 0.86
TMEM56Q96MV1 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC20.44■□□□□ 0.86
TMEM56Q96MV1 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TMEM56Q96MV1 AC092803.2-201ENST00000564287 1899 ntBASIC20.43■□□□□ 0.86
TMEM56Q96MV1 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
TMEM56Q96MV1 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TMEM56Q96MV1 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
TMEM56Q96MV1 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
TMEM56Q96MV1 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
TMEM56Q96MV1 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TMEM56Q96MV1 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 9.1 ms