Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SMIM4Q8WVI0 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SMIM4Q8WVI0 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SMIM4Q8WVI0 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SMIM4Q8WVI0 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SMIM4Q8WVI0 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
SMIM4Q8WVI0 AC092803.2-201ENST00000564287 1899 ntBASIC21.49■■□□□ 1.03
SMIM4Q8WVI0 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
SMIM4Q8WVI0 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
SMIM4Q8WVI0 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC21.48■■□□□ 1.03
SMIM4Q8WVI0 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SMIM4Q8WVI0 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
SMIM4Q8WVI0 AC018358.1-201ENST00000631079 1402 ntBASIC21.47■■□□□ 1.03
SMIM4Q8WVI0 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SMIM4Q8WVI0 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.47■■□□□ 1.03
SMIM4Q8WVI0 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC21.47■■□□□ 1.03
SMIM4Q8WVI0 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
SMIM4Q8WVI0 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SMIM4Q8WVI0 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
SMIM4Q8WVI0 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
SMIM4Q8WVI0 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SMIM4Q8WVI0 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SMIM4Q8WVI0 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SMIM4Q8WVI0 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SMIM4Q8WVI0 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SMIM4Q8WVI0 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SMIM4Q8WVI0 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
SMIM4Q8WVI0 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.03
SMIM4Q8WVI0 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.45■■□□□ 1.02
SMIM4Q8WVI0 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC21.45■■□□□ 1.02
SMIM4Q8WVI0 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SMIM4Q8WVI0 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
SMIM4Q8WVI0 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
SMIM4Q8WVI0 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
SMIM4Q8WVI0 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SMIM4Q8WVI0 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC21.43■■□□□ 1.02
SMIM4Q8WVI0 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC21.43■■□□□ 1.02
SMIM4Q8WVI0 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
SMIM4Q8WVI0 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
SMIM4Q8WVI0 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.43■■□□□ 1.02
SMIM4Q8WVI0 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
SMIM4Q8WVI0 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SMIM4Q8WVI0 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SMIM4Q8WVI0 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SMIM4Q8WVI0 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SMIM4Q8WVI0 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SMIM4Q8WVI0 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
SMIM4Q8WVI0 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
SMIM4Q8WVI0 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SMIM4Q8WVI0 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SMIM4Q8WVI0 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.41■■□□□ 1.02
SMIM4Q8WVI0 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
SMIM4Q8WVI0 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.41■■□□□ 1.02
SMIM4Q8WVI0 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SMIM4Q8WVI0 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
SMIM4Q8WVI0 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SMIM4Q8WVI0 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SMIM4Q8WVI0 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
SMIM4Q8WVI0 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC21.39■■□□□ 1.01
SMIM4Q8WVI0 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SMIM4Q8WVI0 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SMIM4Q8WVI0 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SMIM4Q8WVI0 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SMIM4Q8WVI0 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC21.38■■□□□ 1.01
SMIM4Q8WVI0 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.38■■□□□ 1.01
SMIM4Q8WVI0 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
SMIM4Q8WVI0 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SMIM4Q8WVI0 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SMIM4Q8WVI0 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.37■■□□□ 1.01
SMIM4Q8WVI0 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SMIM4Q8WVI0 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC21.37■■□□□ 1.01
SMIM4Q8WVI0 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
SMIM4Q8WVI0 KLF16-203ENST00000592313 508 ntTSL 3 BASIC21.37■■□□□ 1.01
SMIM4Q8WVI0 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SMIM4Q8WVI0 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
SMIM4Q8WVI0 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SMIM4Q8WVI0 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.36■■□□□ 1.01
SMIM4Q8WVI0 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC21.36■■□□□ 1.01
SMIM4Q8WVI0 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
SMIM4Q8WVI0 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SMIM4Q8WVI0 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SMIM4Q8WVI0 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC21.35■■□□□ 1.01
SMIM4Q8WVI0 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC21.35■■□□□ 1.01
SMIM4Q8WVI0 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SMIM4Q8WVI0 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SMIM4Q8WVI0 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SMIM4Q8WVI0 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SMIM4Q8WVI0 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SMIM4Q8WVI0 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SMIM4Q8WVI0 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC21.34■■□□□ 1.01
SMIM4Q8WVI0 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC21.34■■□□□ 1.01
SMIM4Q8WVI0 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
SMIM4Q8WVI0 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.33■■□□□ 1.01
SMIM4Q8WVI0 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
SMIM4Q8WVI0 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC21.33■■□□□ 1.01
SMIM4Q8WVI0 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.33■■□□□ 1.01
SMIM4Q8WVI0 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
SMIM4Q8WVI0 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
SMIM4Q8WVI0 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
SMIM4Q8WVI0 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms