Protein–RNA interactions for Protein: Q8N5V2

NGEF, Ephexin-1, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NGEFQ8N5V2 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC33.38■■■□□ 2.93
NGEFQ8N5V2 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC33.38■■■□□ 2.93
NGEFQ8N5V2 SHF-208ENST00000560734 1731 ntTSL 3 BASIC33.37■■■□□ 2.93
NGEFQ8N5V2 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC33.37■■■□□ 2.93
NGEFQ8N5V2 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC33.36■■■□□ 2.93
NGEFQ8N5V2 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC33.35■■■□□ 2.93
NGEFQ8N5V2 PEX7-203ENST00000541292 945 ntTSL 5 BASIC33.35■■■□□ 2.93
NGEFQ8N5V2 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC33.34■■■□□ 2.93
NGEFQ8N5V2 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC33.34■■■□□ 2.93
NGEFQ8N5V2 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC33.33■■■□□ 2.93
NGEFQ8N5V2 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC33.32■■■□□ 2.92
NGEFQ8N5V2 AC110285.7-201ENST00000624417 1536 ntBASIC33.32■■■□□ 2.92
NGEFQ8N5V2 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC33.31■■■□□ 2.92
NGEFQ8N5V2 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC33.31■■■□□ 2.92
NGEFQ8N5V2 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC33.3■■■□□ 2.92
NGEFQ8N5V2 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC33.3■■■□□ 2.92
NGEFQ8N5V2 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC33.3■■■□□ 2.92
NGEFQ8N5V2 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC33.3■■■□□ 2.92
NGEFQ8N5V2 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC33.29■■■□□ 2.92
NGEFQ8N5V2 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC33.28■■■□□ 2.92
NGEFQ8N5V2 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC33.28■■■□□ 2.92
NGEFQ8N5V2 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC33.28■■■□□ 2.92
NGEFQ8N5V2 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC33.27■■■□□ 2.92
NGEFQ8N5V2 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC33.27■■■□□ 2.92
NGEFQ8N5V2 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC33.27■■■□□ 2.92
NGEFQ8N5V2 CHST11-202ENST00000546689 756 ntTSL 2 BASIC33.26■■■□□ 2.91
NGEFQ8N5V2 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC33.25■■■□□ 2.91
NGEFQ8N5V2 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC33.25■■■□□ 2.91
NGEFQ8N5V2 HSD17B1P1-201ENST00000590052 955 ntBASIC33.25■■■□□ 2.91
NGEFQ8N5V2 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC33.25■■■□□ 2.91
NGEFQ8N5V2 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC33.24■■■□□ 2.91
NGEFQ8N5V2 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC33.23■■■□□ 2.91
NGEFQ8N5V2 ABHD17AP3-201ENST00000503096 1137 ntBASIC33.23■■■□□ 2.91
NGEFQ8N5V2 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC33.23■■■□□ 2.91
NGEFQ8N5V2 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
NGEFQ8N5V2 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
NGEFQ8N5V2 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC33.23■■■□□ 2.91
NGEFQ8N5V2 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC33.22■■■□□ 2.91
NGEFQ8N5V2 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC33.22■■■□□ 2.91
NGEFQ8N5V2 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC33.21■■■□□ 2.91
NGEFQ8N5V2 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC33.21■■■□□ 2.91
NGEFQ8N5V2 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC33.21■■■□□ 2.91
NGEFQ8N5V2 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
NGEFQ8N5V2 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC33.2■■■□□ 2.91
NGEFQ8N5V2 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC33.2■■■□□ 2.91
NGEFQ8N5V2 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC33.19■■■□□ 2.9
NGEFQ8N5V2 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC33.19■■■□□ 2.9
NGEFQ8N5V2 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC33.19■■■□□ 2.9
NGEFQ8N5V2 RPS2-210ENST00000530225 765 ntTSL 2 BASIC33.19■■■□□ 2.9
NGEFQ8N5V2 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC33.19■■■□□ 2.9
NGEFQ8N5V2 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC33.18■■■□□ 2.9
NGEFQ8N5V2 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC33.18■■■□□ 2.9
NGEFQ8N5V2 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC33.18■■■□□ 2.9
NGEFQ8N5V2 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9
NGEFQ8N5V2 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC33.17■■■□□ 2.9
NGEFQ8N5V2 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC33.17■■■□□ 2.9
NGEFQ8N5V2 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC33.16■■■□□ 2.9
NGEFQ8N5V2 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC33.16■■■□□ 2.9
NGEFQ8N5V2 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
NGEFQ8N5V2 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC33.15■■■□□ 2.9
NGEFQ8N5V2 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC33.14■■■□□ 2.9
NGEFQ8N5V2 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC33.14■■■□□ 2.9
NGEFQ8N5V2 BRD4-212ENST00000630599 726 ntTSL 2 BASIC33.14■■■□□ 2.9
NGEFQ8N5V2 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC33.14■■■□□ 2.9
NGEFQ8N5V2 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC33.12■■■□□ 2.89
NGEFQ8N5V2 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC33.12■■■□□ 2.89
NGEFQ8N5V2 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC33.12■■■□□ 2.89
NGEFQ8N5V2 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC33.12■■■□□ 2.89
NGEFQ8N5V2 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC33.12■■■□□ 2.89
NGEFQ8N5V2 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC33.12■■■□□ 2.89
NGEFQ8N5V2 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC33.11■■■□□ 2.89
NGEFQ8N5V2 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
NGEFQ8N5V2 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC33.11■■■□□ 2.89
NGEFQ8N5V2 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC33.11■■■□□ 2.89
NGEFQ8N5V2 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC33.09■■■□□ 2.89
NGEFQ8N5V2 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
NGEFQ8N5V2 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC33.09■■■□□ 2.89
NGEFQ8N5V2 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC33.08■■■□□ 2.89
NGEFQ8N5V2 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC33.08■■■□□ 2.89
NGEFQ8N5V2 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
NGEFQ8N5V2 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC33.07■■■□□ 2.88
NGEFQ8N5V2 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
NGEFQ8N5V2 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC33.05■■■□□ 2.88
NGEFQ8N5V2 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
NGEFQ8N5V2 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC33.05■■■□□ 2.88
NGEFQ8N5V2 AC008813.1-201ENST00000536597 885 ntBASIC33.05■■■□□ 2.88
NGEFQ8N5V2 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC33.05■■■□□ 2.88
NGEFQ8N5V2 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC33.05■■■□□ 2.88
NGEFQ8N5V2 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC33.04■■■□□ 2.88
NGEFQ8N5V2 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC33.04■■■□□ 2.88
NGEFQ8N5V2 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
NGEFQ8N5V2 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC33.03■■■□□ 2.88
NGEFQ8N5V2 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC33.03■■■□□ 2.88
NGEFQ8N5V2 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC33.03■■■□□ 2.88
NGEFQ8N5V2 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC33.03■■■□□ 2.88
NGEFQ8N5V2 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC33.03■■■□□ 2.88
NGEFQ8N5V2 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC33.03■■■□□ 2.88
NGEFQ8N5V2 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC33.03■■■□□ 2.88
NGEFQ8N5V2 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC33.03■■■□□ 2.88
NGEFQ8N5V2 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC33.03■■■□□ 2.88
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms